GBrowse Details

Vigan.08G245600.01

Basic Information:
Name: Vigan.08G245600.01
Multiple alignment
Variant Information
Position: Chr08:23914235..23915709 (+ strand)
Length: 1475
Functional Information:
Description: Similar to Uncharacterized protein. [I1L7W8, Glycine max]
GO: Molecular Function: protein binding (GO:0005515)
InterPro: Glutathione S-transferase, N-terminal (IPR004045)
Glutathione S-transferase, C-terminal (IPR004046)
Glutathione S-transferase, C-terminal-like (IPR010987)
Thioredoxin-like fold (IPR012336)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.78,2.35,0.00,0.03,5.16,7.37,0 .74
Arabidopsis thaliana homolog: AT3G62760.1
Automatic updates:
Name: KM818396 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max phi class glutathione S-transferase (GSTF1) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: KM818401 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max phi class glutathione S-transferase (GSTF7) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: NM_001255110 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max probable glutathione S-transferase GSTF1-like (LOC100815147), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:23914235..23914311 (+ strand)
Length: 77
Type: five_prime_UTR
Position: Chr08:23914312..23914458 (+ strand)
Length: 147
Type: CDS
Position: Chr08:23914534..23914582 (+ strand)
Length: 49
Type: CDS
Position: Chr08:23915006..23915469 (+ strand)
Length: 464
Type: CDS
Position: Chr08:23915470..23915709 (+ strand)
Length: 240
Type: three_prime_UTR

>Vigan.08G245600.01 class=Sequence position=Chr08:23914235..23915709 (+ strand)
TATAAATGGA CCTTGCTTTC TTATCATACA TGTCTCTCTC TCCCTCTCGC TTTCCACACC TGTAGCAACC AAAAACAATG
GCGCTCAAGC TTTATGGTCT TCCTATGTCC ACAAACACCA CCCGTGCCAT CATCTGTCTC CATGAGAAAG AGGTCGATTT
TGAACTTGTT CCGGTCAATG TTTTCACTGC AGAGCATAAA CAGCCTCCTT TTCTCTCCAA GAACGTAAGC CCTTCAACTT
TTCTCTTTTC TTAATAAGCT AGCTCCCACC TACTGACTTT TCTAGTGTTT CACATGCAGC CCTTTGGTTT GATTCCAGTA
CTCGAAGACG GTGAACTCAT TCTTTTTGGT ATATACTTTC ATTCTTCTTC TTCAGTTGCT ATACTATTTT TACAATTTTT
TTTTGTCACT TTACATGAAC CCCTTTTGTC CATAAAATCT TACCCAGAAT GCAAGTTTTT ATCGGATTTA TATATCAAGC
ATGACTTTGT TCCATCAAAA TCATCATATA TACGTTGTCA AGATATGTCA AGAACATGAA TCCTTAGCAG TTCAAATCAC
GTGGAGGTTC TGGACTATCA TGGTCTTGAA CCACATGATG GTCGCTAAAT TCCAAATGCA TGTCCTATAA AGTGAAACTG
TTTACTGAAC TATCCTATTT CATTGATTCT CCAACTGATC TGAAAGCTGA AATTTCAAGC AATTGCCCAA AATGTGTCAA
TCTTTTTCTT AATCTTGAAA TGATGTATCT TTTTGAGGCT TTGCATGACA GAGTCCAGGG CCATTACTGC ATACGTAGCT
GAAAAGTTCA AGGAAACAGG ACCTGATCTG ATAAGGCACA AGGACGTAAA AGAAGGTGCA CTGGTGAAGG TGTGGACGGA
GGTAGAGGCT CACTACTACG AGCCAGCAGT GTCACCTATT ATCTACGAGC ACTTCGTGGC CCCTTTCCAA GGCAAAGAAC
CAGACAAGTC AGTGATTGAC ACCAACGTTG AGAAGCTTAA GAAGGTGCTG GATGTGTACG AGGAAAAGCT GAGCAGCACT
AAGTACCTTG CTGGGGACTT TTATAGCCTT GCTGATCTTA GCCATGTCTC TGAAACTCAC TACTTAATGC AGACCCCTTG
TGCTTCCATG ATCAATGAGC GTCCCCATGT AAAAGCTTGG TGGGAAGATA TCTCTTCTAG GCCTGCTTTC AGTAAGGTTG
AGCCAGGAAT GACTTTTGGT AAGAATCAAG AATGAGTGTT TCCATGTTCT GTGAGGTTCT TAAGGCTTAG TGTGTTGTAC
TATGTTGTCT AGTGTAGCAA CTATGATCCA AGTCTTGCTT ATTTTCATTT CAAGTAACTA GAGTTTGGAA AACCAACCAG
CTTTTAGAGT GTCTTTAGGA AGGACAATTT GAGTTCCGTT ATCTTCATTT GATTAATTTA GAAAACTAAT TGAGTTGTAG
TGTTTGAACG TAAGTTAAAT CCTTTACATC ATTAA

>Vigan.08G245600.01
TATAAATGGA CCTTGCTTTC TTATCATACA TGTCTCTCTC TCCCTCTCGC TTTCCACACC TGTAGCAACC AAAAACAATG
GCGCTCAAGC TTTATGGTCT TCCTATGTCC ACAAACACCA CCCGTGCCAT CATCTGTCTC CATGAGAAAG AGGTCGATTT
TGAACTTGTT CCGGTCAATG TTTTCACTGC AGAGCATAAA CAGCCTCCTT TTCTCTCCAA GAACCCCTTT GGTTTGATTC
CAGTACTCGA AGACGGTGAA CTCATTCTTT TTGAGTCCAG GGCCATTACT GCATACGTAG CTGAAAAGTT CAAGGAAACA
GGACCTGATC TGATAAGGCA CAAGGACGTA AAAGAAGGTG CACTGGTGAA GGTGTGGACG GAGGTAGAGG CTCACTACTA
CGAGCCAGCA GTGTCACCTA TTATCTACGA GCACTTCGTG GCCCCTTTCC AAGGCAAAGA ACCAGACAAG TCAGTGATTG
ACACCAACGT TGAGAAGCTT AAGAAGGTGC TGGATGTGTA CGAGGAAAAG CTGAGCAGCA CTAAGTACCT TGCTGGGGAC
TTTTATAGCC TTGCTGATCT TAGCCATGTC TCTGAAACTC ACTACTTAAT GCAGACCCCT TGTGCTTCCA TGATCAATGA
GCGTCCCCAT GTAAAAGCTT GGTGGGAAGA TATCTCTTCT AGGCCTGCTT TCAGTAAGGT TGAGCCAGGA ATGACTTTTG
GTAAGAATCA AGAATGAGTG TTTCCATGTT CTGTGAGGTT CTTAAGGCTT AGTGTGTTGT ACTATGTTGT CTAGTGTAGC
AACTATGATC CAAGTCTTGC TTATTTTCAT TTCAAGTAAC TAGAGTTTGG AAAACCAACC AGCTTTTAGA GTGTCTTTAG
GAAGGACAAT TTGAGTTCCG TTATCTTCAT TTGATTAATT TAGAAAACTA ATTGAGTTGT AGTGTTTGAA CGTAAGTTAA
ATCCTTTACA TCATTAA

>Vigan.08G245600.01
ATGGCGCTCA AGCTTTATGG TCTTCCTATG TCCACAAACA CCACCCGTGC CATCATCTGT CTCCATGAGA AAGAGGTCGA
TTTTGAACTT GTTCCGGTCA ATGTTTTCAC TGCAGAGCAT AAACAGCCTC CTTTTCTCTC CAAGAACCCC TTTGGTTTGA
TTCCAGTACT CGAAGACGGT GAACTCATTC TTTTTGAGTC CAGGGCCATT ACTGCATACG TAGCTGAAAA GTTCAAGGAA
ACAGGACCTG ATCTGATAAG GCACAAGGAC GTAAAAGAAG GTGCACTGGT GAAGGTGTGG ACGGAGGTAG AGGCTCACTA
CTACGAGCCA GCAGTGTCAC CTATTATCTA CGAGCACTTC GTGGCCCCTT TCCAAGGCAA AGAACCAGAC AAGTCAGTGA
TTGACACCAA CGTTGAGAAG CTTAAGAAGG TGCTGGATGT GTACGAGGAA AAGCTGAGCA GCACTAAGTA CCTTGCTGGG
GACTTTTATA GCCTTGCTGA TCTTAGCCAT GTCTCTGAAA CTCACTACTT AATGCAGACC CCTTGTGCTT CCATGATCAA
TGAGCGTCCC CATGTAAAAG CTTGGTGGGA AGATATCTCT TCTAGGCCTG CTTTCAGTAA GGTTGAGCCA GGAATGACTT
TTGGTAAGAA TCAAGAATGA 

>Vigan.08G245600.01
MALKLYGLPM STNTTRAIIC LHEKEVDFEL VPVNVFTAEH KQPPFLSKNP FGLIPVLEDG ELILFESRAI TAYVAEKFKE
TGPDLIRHKD VKEGALVKVW TEVEAHYYEP AVSPIIYEHF VAPFQGKEPD KSVIDTNVEK LKKVLDVYEE KLSSTKYLAG
DFYSLADLSH VSETHYLMQT PCASMINERP HVKAWWEDIS SRPAFSKVEP GMTFGKNQE*