GBrowse Details

Vigan.08G222700.01

Basic Information:
Name: Vigan.08G222700.01
Multiple alignment
Variant Information
Position: Chr08:20256225..20258784 (- strand)
Length: 2560
Functional Information:
Description: Similar to glutathione S-transferase. [XP_008235548.1, Prunus mume]
GO: Molecular Function: protein binding (GO:0005515)
InterPro: Glutathione S-transferase, N-terminal (IPR004045)
Glutathione S-transferase, C-terminal-like (IPR010987)
Thioredoxin-like fold (IPR012336)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.06,2.15,1.36,1.37,1.86,0.06,2.67
Automatic updates:
Name: KM818457 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max tau class glutathione S-transferase (GSTU44) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:20256225..20256994 (- strand)
Length: 770
Type: three_prime_UTR
Position: Chr08:20256995..20257351 (- strand)
Length: 357
Type: CDS
Position: Chr08:20257438..20257752 (- strand)
Length: 315
Type: CDS
Position: Chr08:20257753..20258784 (- strand)
Length: 1032
Type: five_prime_UTR

>Vigan.08G222700.01 class=Sequence position=Chr08:20256225..20258784 (- strand)
GTTGAATTGG CACAACAACG ATGGTATGGA TTGTATTTAA TGTTTGATTG TAACTGGAAT AAAATTGTTT CATAAATAAA
AGAGACATAG AGAGACAGAG AAAATATAGA TAAAGTAGAA GGCAGCTATG AATTGTGAGC AATTCCTCTG AATTGGATTG
AATTGCCCTC GCTTTTGCAA CGCACTCTAC CTTAAAGATC AGCACCAACC ACTGTGAGCC AATTCTTTTC AATTTTTATT
TGAAGTATGA ACTATATTAG CTTGTTAAAA ACGTATGCAA TCTTGAAATT TGGTGCCATA TGATTGATGG TATCATGTAT
GTCAGCTGAT CTTGCAAGAT CTGGAAAAGA TCTTTGGCTG CTTGCCCATA AGTAACCATT TTATGCTTTC TTGTTGTCTT
GGGGCTATAT TCTCAGGGTT CATGAACTGA TAATTATGTT ATTGAATTAA TGAAAAGGTT TGAAGTTTCA CCAGCAGTTT
TTGGAATCTG TAGAATTTGG TTCGAGTTCG CTTGTCCTAT CCTATTTTTC TTTCTTTCAG CTTCATTTTC CTTTGGATTT
CTTAGCGGAG AAAAGAGGGA AAGAAAATCA GCTCCACAGT CCTCACAGAC AGCAAAAATT GTATTAAAAA AAACACATCT
ATTCAATGCT TATTCTTTTT TAAGTAATTT AAAACATTCA ATCTTCAAGA CAGAAAAGGT AGGGATAGAC AATGGAAGGA
AACGTTGCTC TCTGTGTTTT TGATAATTCC TACCATGCCA ACCTATATCT TGACCATTTG CACTGTTTTT TTATTTTTTT
TTATCTTTCA ATTTAATCGT ATGTTTTCAA TTTTTATAAT AACTATTTCA AAAGTCGTAC TATGATATGT TGTTGATTGA
CAGTGTATAG AAAATCAATT TAATACTTCA AAACATGAGA TGTAAGGTTT ACTACTAGAG AGTGTCCTTT TGCGAAAGTG
GCGAAATTGA GCAACCATTC TATTTTAACT TCTCTAACAA TCACAGTAGC AGTGTGCAGT TACAGTCGTA GAATGGGAGA
ACTGAAGCTA CTGGGAGTTT GGCCTAGTCC ATACGTTTAC AGGATCATAT GGGCGTTAGA ACTGAAGGGC ATAAAGTATG
AGCATGTACA AGGAGAATTC CACAACCCTG ATTTCAGTGA TTTGCTACTG AAGTATAACC CAGTTTACAA AAAGGTTCCT
GTCCTTGTTG TTGATGGAAA GCCAATTGCA GAATCCGCTG TCATTCTTGA ATACATAGAG GAAACATGGC CACAGCCACC
CATGCTTCCA CAGGACCCAT ATGAGAGGGC CGTGGCACGG TTTTGGGTGA GTTTTGCTGA AGAAAAGGTA ACAAGGTTGT
TGTTAAGCAG TAGAGATTTT AATTCTCTCT TGTTCTCTCA TTTCTATATC TATGGTTGCA ACGCCAATTG CAGAGTACTT
CGTTTATGTC ATTCTTTGTG GCTGTTGGAG AAGAGTTTCA GAAGGCAACA AAGGAAGTAA GAGAAGTGCT TAAAGTATTA
GAAGAAACCA TTGGGGACAA AAAGTATTTT GGTGGTGAAG AAATTGGAGT TTTGGACATA ACCTTGGGAT GGATACCCTT
GTTCTTTGGA GTCATTGAAG ATATTGTTGG TGTAAAGGTG TTGGTAGTTG ATGATTTTCC TCGCTTGTTT ACTTGGATTC
GGAACTTCAG TGAGCACCCC TCTATCAGAA CGAACTTTCC AAGTCACCAT GAGTTGTTTG GTTATTACAA GCAAAAGAGA
GACACTATTA TTCCACCCAA TACAGCATGA ATGCAGGCAT GAACTGATTT GTATCTATAC GATATATTAT ATTAGTAAAC
TTCCTTGTGC TTGGATGATT GAATTAGACT GATAATTTTA TTTCGAGGAT CCAACTTCAC ATTTCAACCT CATTCAATGC
ATAAAATATG CTCATTATAG TTTGAGGTTT AATGGTGGGG TCCGGTTATA AATTACGAGC ATTTTCCATC TTGATTGATT
AGATATGTCC TTCGAATAAT GGTTTACGTT GTTCCTTATT TATAGTATTA CGAATTTAAT TGCATTTTGG CTTGAGACCA
GTGCGTCCAG TAAAACAAAA TGGCGGAGTA GAACCATCAC CTAACTGAGA AGTTGCAACT TCTAGTTCTG CAAACCATTA
AACGGCAGAT TTGTAACAAG AAGGGCCTGA CTAAAAAGGT CAATGTTTAA GCTATCAGTG CGCTCCGATG TCTTTCAACC
AACATTTGTG ACAAACATAA CATTGAGAGA ACTGCATTGA CCAACAAAAT GAAAAATTAG TGGCATATCA GGTTTACTCT
TGGATGCTTA GCTCTCTGGA GTTTTAGCTT TAGCTTCTGA TAGCAAAGGT TCAAGTTCTC CTTTCCGGTA CAGCTTCAGG
GTATCTGCAT GAGTTAAAAA CAAATGTTGG ACAAAAAAGG AAAAAACAAA GAAATTGCAC TTCTATATTT TTATTAAACT
GTAGTGTTAA ACTTCTTGAA ACTTCCAGAA TACTAAGTTC ATATATGCAG ACAATATACA TTGGCAGTTA TAGATATTTT

>Vigan.08G222700.01
GTTGAATTGG CACAACAACG ATGGTATGGA TTGTATTTAA TGTTTGATTG TAACTGGAAT AAAATTGTTT CATAAATAAA
AGAGACATAG AGAGACAGAG AAAATATAGA TAAAGTAGAA GGCAGCTATG AATTGTGAGC AATTCCTCTG AATTGGATTG
AATTGCCCTC GCTTTTGCAA CGCACTCTAC CTTAAAGATC AGCACCAACC ACTGTGAGCC AATTCTTTTC AATTTTTATT
TGAAGTATGA ACTATATTAG CTTGTTAAAA ACGTATGCAA TCTTGAAATT TGGTGCCATA TGATTGATGG TATCATGTAT
GTCAGCTGAT CTTGCAAGAT CTGGAAAAGA TCTTTGGCTG CTTGCCCATA AGTAACCATT TTATGCTTTC TTGTTGTCTT
GGGGCTATAT TCTCAGGGTT CATGAACTGA TAATTATGTT ATTGAATTAA TGAAAAGGTT TGAAGTTTCA CCAGCAGTTT
TTGGAATCTG TAGAATTTGG TTCGAGTTCG CTTGTCCTAT CCTATTTTTC TTTCTTTCAG CTTCATTTTC CTTTGGATTT
CTTAGCGGAG AAAAGAGGGA AAGAAAATCA GCTCCACAGT CCTCACAGAC AGCAAAAATT GTATTAAAAA AAACACATCT
ATTCAATGCT TATTCTTTTT TAAGTAATTT AAAACATTCA ATCTTCAAGA CAGAAAAGGT AGGGATAGAC AATGGAAGGA
AACGTTGCTC TCTGTGTTTT TGATAATTCC TACCATGCCA ACCTATATCT TGACCATTTG CACTGTTTTT TTATTTTTTT
TTATCTTTCA ATTTAATCGT ATGTTTTCAA TTTTTATAAT AACTATTTCA AAAGTCGTAC TATGATATGT TGTTGATTGA
CAGTGTATAG AAAATCAATT TAATACTTCA AAACATGAGA TGTAAGGTTT ACTACTAGAG AGTGTCCTTT TGCGAAAGTG
GCGAAATTGA GCAACCATTC TATTTTAACT TCTCTAACAA TCACAGTAGC AGTGTGCAGT TACAGTCGTA GAATGGGAGA
ACTGAAGCTA CTGGGAGTTT GGCCTAGTCC ATACGTTTAC AGGATCATAT GGGCGTTAGA ACTGAAGGGC ATAAAGTATG
AGCATGTACA AGGAGAATTC CACAACCCTG ATTTCAGTGA TTTGCTACTG AAGTATAACC CAGTTTACAA AAAGGTTCCT
GTCCTTGTTG TTGATGGAAA GCCAATTGCA GAATCCGCTG TCATTCTTGA ATACATAGAG GAAACATGGC CACAGCCACC
CATGCTTCCA CAGGACCCAT ATGAGAGGGC CGTGGCACGG TTTTGGGTGA GTTTTGCTGA AGAAAAGAGT ACTTCGTTTA
TGTCATTCTT TGTGGCTGTT GGAGAAGAGT TTCAGAAGGC AACAAAGGAA GTAAGAGAAG TGCTTAAAGT ATTAGAAGAA
ACCATTGGGG ACAAAAAGTA TTTTGGTGGT GAAGAAATTG GAGTTTTGGA CATAACCTTG GGATGGATAC CCTTGTTCTT
TGGAGTCATT GAAGATATTG TTGGTGTAAA GGTGTTGGTA GTTGATGATT TTCCTCGCTT GTTTACTTGG ATTCGGAACT
TCAGTGAGCA CCCCTCTATC AGAACGAACT TTCCAAGTCA CCATGAGTTG TTTGGTTATT ACAAGCAAAA GAGAGACACT
ATTATTCCAC CCAATACAGC ATGAATGCAG GCATGAACTG ATTTGTATCT ATACGATATA TTATATTAGT AAACTTCCTT
GTGCTTGGAT GATTGAATTA GACTGATAAT TTTATTTCGA GGATCCAACT TCACATTTCA ACCTCATTCA ATGCATAAAA
TATGCTCATT ATAGTTTGAG GTTTAATGGT GGGGTCCGGT TATAAATTAC GAGCATTTTC CATCTTGATT GATTAGATAT
GTCCTTCGAA TAATGGTTTA CGTTGTTCCT TATTTATAGT ATTACGAATT TAATTGCATT TTGGCTTGAG ACCAGTGCGT
CCAGTAAAAC AAAATGGCGG AGTAGAACCA TCACCTAACT GAGAAGTTGC AACTTCTAGT TCTGCAAACC ATTAAACGGC
AGATTTGTAA CAAGAAGGGC CTGACTAAAA AGGTCAATGT TTAAGCTATC AGTGCGCTCC GATGTCTTTC AACCAACATT
TGTGACAAAC ATAACATTGA GAGAACTGCA TTGACCAACA AAATGAAAAA TTAGTGGCAT ATCAGGTTTA CTCTTGGATG
CTTAGCTCTC TGGAGTTTTA GCTTTAGCTT CTGATAGCAA AGGTTCAAGT TCTCCTTTCC GGTACAGCTT CAGGGTATCT
GCATGAGTTA AAAACAAATG TTGGACAAAA AAGGAAAAAA CAAAGAAATT GCACTTCTAT ATTTTTATTA AACTGTAGTG
TTAAACTTCT TGAAACTTCC AGAATACTAA GTTCATATAT GCAGACAATA TACATTGGCA GTTATAGATA TTTT

>Vigan.08G222700.01
ATGGGAGAAC TGAAGCTACT GGGAGTTTGG CCTAGTCCAT ACGTTTACAG GATCATATGG GCGTTAGAAC TGAAGGGCAT
AAAGTATGAG CATGTACAAG GAGAATTCCA CAACCCTGAT TTCAGTGATT TGCTACTGAA GTATAACCCA GTTTACAAAA
AGGTTCCTGT CCTTGTTGTT GATGGAAAGC CAATTGCAGA ATCCGCTGTC ATTCTTGAAT ACATAGAGGA AACATGGCCA
CAGCCACCCA TGCTTCCACA GGACCCATAT GAGAGGGCCG TGGCACGGTT TTGGGTGAGT TTTGCTGAAG AAAAGAGTAC
TTCGTTTATG TCATTCTTTG TGGCTGTTGG AGAAGAGTTT CAGAAGGCAA CAAAGGAAGT AAGAGAAGTG CTTAAAGTAT
TAGAAGAAAC CATTGGGGAC AAAAAGTATT TTGGTGGTGA AGAAATTGGA GTTTTGGACA TAACCTTGGG ATGGATACCC
TTGTTCTTTG GAGTCATTGA AGATATTGTT GGTGTAAAGG TGTTGGTAGT TGATGATTTT CCTCGCTTGT TTACTTGGAT
TCGGAACTTC AGTGAGCACC CCTCTATCAG AACGAACTTT CCAAGTCACC ATGAGTTGTT TGGTTATTAC AAGCAAAAGA
GAGACACTAT TATTCCACCC AATACAGCAT GA

>Vigan.08G222700.01
MGELKLLGVW PSPYVYRIIW ALELKGIKYE HVQGEFHNPD FSDLLLKYNP VYKKVPVLVV DGKPIAESAV ILEYIEETWP
QPPMLPQDPY ERAVARFWVS FAEEKSTSFM SFFVAVGEEF QKATKEVREV LKVLEETIGD KKYFGGEEIG VLDITLGWIP
LFFGVIEDIV GVKVLVVDDF PRLFTWIRNF SEHPSIRTNF PSHHELFGYY KQKRDTIIPP NTA*