GBrowse Details

Vigan.08G099700.01

Basic Information:
Name: Vigan.08G099700.01
Multiple alignment
Variant Information
Position: Chr08:8386146..8390725 (+ strand)
Length: 4580
Functional Information:
Description: Similar to Uncharacterized protein. [I1LD87, Glycine max]
GO: Biological Process: glycerol ether metabolic process (GO:0006662)
Biological Process: cell redox homeostasis (GO:0045454)
Molecular Function: protein disulfide oxidoreductase activity (GO:0015035)
InterPro: Thioredoxin (IPR005746)
Thioredoxin-like fold (IPR012336)
Thioredoxin domain (IPR013766)
Thioredoxin, conserved site (IPR017937)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:22.42,9.26,18.65,15.29,25.71,20.96,4 5.03,20.68
Arabidopsis thaliana homolog: AT1G35620.1
Structure :
Position: Chr08:8386146..8386358 (+ strand)
Length: 213
Type: five_prime_UTR
Position: Chr08:8386359..8386559 (+ strand)
Length: 201
Type: CDS
Position: Chr08:8387205..8387308 (+ strand)
Length: 104
Type: CDS
Position: Chr08:8387466..8387836 (+ strand)
Length: 371
Type: CDS
Position: Chr08:8388543..8388844 (+ strand)
Length: 302
Type: CDS
Position: Chr08:8390124..8390441 (+ strand)
Length: 318
Type: CDS
Position: Chr08:8390442..8390725 (+ strand)
Length: 284
Type: three_prime_UTR

>Vigan.08G099700.01 class=Sequence position=Chr08:8386146..8390725 (+ strand)
GCCATGGTAA GGTCGTAATT TGCATAGTAA AGTGAAATTA AGTTTTAGTT TTAATCTAAT CCCACTTTGT GATCCGATCT
GATCCATGAG TAATGAAAAT TAAGCATGCA AAGTAGGAAA TAGAGGTTAG GAGGTTGAAA GGCGGAAAAC AGAGTTTTAA
GTGTTGTGTT GGGTCGTGTC GTGTTGGGAT CCGACACAAA CAAACGAGAG AAGATGACGA TGAGGGTTTC GGTTGTTTTA
AGTGTTCTGT TCTTGATCCA GTTTTGGCCT GGGGAAGCTG AGAAATTTTC GGTGGATGGA AAGGTTTTGA TTTTGGACGA
CTCCAACTTC GATTCCGCCA TAGCTTCCTT TGATCACATC TTGGTTGACT TTTACGCTCC CTGGTGTGGT CACTGCAAGC
GTCTTGCTCC CGAGGTGTGC CCCCTTTATA CCCTTTCGTG GGTCTCTTCA AGTTTTCCTT TTGATTTCAA ATTCTCTTTT
TATTTGCCTT TGCTTCATGG GTCATGCTTT GCAGTTCGTT GCTTTGACAA TATAGTATGT AATGAATTCA TGGAAGCATA
TGTGTCTTGA TAAGAGAAAT GCTAGCAGGA CACCCTCTGA ACTACTGTTT CTAACACTCT GATGTTGATT GAAATCTACC
GGAAATTGCA AAATTTTGTG GGTTTCACTC CTTATTTAAT GTGTGGGAAT GAACTTCACT CATGGTTTTA TAGTTTCTAG
TGTGTTGTTA GGGCTCCTTG TTTTGATGTT GGTTGGACAG TGCATCTCAA ACATGATGCT CGTTTTTTTT TCTTGAGTGG
TTTGCTTGAT GAGCATTAGT TTCACATGTT GCGGCAGTGC TTCTTGTTTC TATTAGGTGT GAACTTTGTC AAAGGTCTCT
GAGATAAAAC TGATTTGTGA TGTGAGTTTT ATAATGCATT GCACTTAATG TTTAGTTTTG CTCGACGAGA GATTAACGAG
TGTCATTTTA TGTTGCACTT ATTTTTAATA CCTTACCTAG TGGGATAAGT CTTTGTTGTT GTTTGTGTGA GATAATAGCT
GTGCTTTTCT TCCTTGCAGT TAGATGCAGC TGCGCCTGTA CTTGCAACCT TGAACAAACC CATTGTCATT GCAAAAGTAG
ATGCAGACAA ACATACCAGC CTTGCAAAAA AATATGATGT TGAGTATGTT TCTGCGGCCA TACCGTTATA TGGCTTGCTT
AAACTGTCTT TGTTTCTTAA TAACTATGAT ATATACGTGT TACTTTTTGG TTCAGCAATT AAGGAGACAA ATGCTTTTAT
TTCATGAATA AACTCACCAT ACTTCTATTC TGGTTTGTAG TGCATATCCA ACCATTTTGC TGTTTAATCA TGGCATCCCC
ACCGAATACC GTGGACCAAG GAAGGCAGAT TTACTCGTTA GATATCTGAA GAAGTTTGCT GCTTCTGATG TTTCCATTCT
TGATTCAGAT TCTGCCGTGA ATACATTCGT TGCAGAAGCT GGACCTTTTT TCCCCATTTT TATAGGTTTC GGTTTGAAAA
ACACGATAAT AGAAAAGTTT GGCATAAAGT ACAAGAAAAA TGCATGGTTT TCTGTGGCAA AGGACTTTTC AGAGGATCTC
ATGGTATTGT ATGACTTTGA TAAGATTCCT GCATTGGTTT CCCTGAATCC ACAGTACAAT GAGCGGAACA CATTCTACGG
ACCCTTTGAA GGTTAGTTGA TATTAGATAA TCAAGGTTAT CGCTTATACT TATTTTATGT GCTAGTTAGT CCATCTGTAC
TTCTCCTAAA GATTCATGCA TTTGCGTTGA ACTTGACACA TCCAAGAAAT GTTGAATCAG CTAACAGAGA ATTGAACTTT
TAGACATTTT TCATATTTCC AAGTCTCAAG TGTTTTAAGA TGTTTGCATT TTACTTGAGT GGAATGCTAA TAAAACTTGA
AGCTGTGTCT TCATCTTTGC AATTTTGGTG GTATATGGTA ACTTTTATGG CATCCGTTTG TATTTCTGCC TAGACAGTGA
ATGAAATAAG TTTCGAAGAA ATTACCAAGG GAATTAGACT GAAGTTGAAA TCTAAGCTTA ACAGAATTAT TTCATTTGAG
AGGCCCTCTT TTTGTTTCAT GGTAGGAATT GAAGTTTGAA TGCAAATACT TCAGTGAATT TGTTTTTTCT TAATAAATCG
GAGCTTGAAT GTTAGCTATT AATCCAGAAT TCCTTTCCTG TGAGTCACTA GGAGTTCCTA CAATGTTCTA AGCTCATAGC
ACTTCTTGAT TATGTGTTAT ACATTTTTGC TTTTTCTTCT CTCGCATTCT GTTATGCTGG AATGTATTTA TTTTTGTTTG
TATACTCTTT AAATGCTAAA GTTTGATACA TCATTACAGG AATCATTTGA TGAATAATGT TTGTTTTCAT AAAGCAGATG
AATTTTTGGA AGATTTTGTT AAACAAAACC TGATGCCTCT GGTCGTGCCG ATATCCTACG AAACACTTAA GTTGGTGAAA
GCAGATGGTA GGAAAGTAGT TTTGACCATT GTTGAAGATG AAGATGAAGA AAGATCAAGA GAATTGACTA AGTTATTGAA
GGCTGCTGCA TCTGCTAATC GTGACTTAGT ATTTGGTTAT GTTGGAGTCA AACAAATGGA AGAATTTGCT GAGCAGTTTG
ATATTAGTAC TAAACTACCA AAAATGGTGG TTTGGGATAA AAGTGATGAT TACCTTTCAG TAAGTCTATG GTCTTTACTT
TTAAATGTTA TTTTAGTATA TCCAAATTCC AATTCTCTAA ATGATCTGTA GCATGGACTC TCCTTGTCTT GTACTCTTAT
TTACATGCCT AGTTTTAAGT TTGTCTTCTC GTGCTGATAC TATTCTCTTG CATGTTTTGA TTGTTTTAGT AATTTGAACC
TATATTTATA TACTTGTGTA TTTTCAAGAT GAGTTGTGAA GCTGGAGAAA ATTCTCTTAT TCTGACATTG AATCTAAAAT
AGAAGAGCGA ATTGAGACTA CCTGTTGTTA AATACCCGGA ACTTAATATC CCAATGTTAA TTTGGCTTAA AATTTATTTC
ATTTATAACT GGGATACACT AGAACAAGAT TATGGATTGC CTGTAGTCAT GTATCACACA TTCCTACAAA CCCAGCATTT
CAAAACTAGT GTCCTAAAAA TATGGGGTGT CTTACTTTTT TGGTTAGGAT TTGTGAGCAT ACTAAATGCC CCTGTTTGCT
GCTGTAAATA TGTCTCTCCT TTGATCATCA GTTGAAGGAT TGCTTTGTGA TATTTCACCT GAATGCCATG ACCTAGTCAA
TATTGGTTCT TCCTTTAAGG TTGATGGTGT TGATGACATT TTCCATACTT CTACCATCTG TTTTTTTAAA AAGACAAGGA
CTCAAACCTA TTTGGGGCAA GTGATTGTTG TAAAATTTGT GAAAATATGG TAAGTCATAC CTATTTGGGA TGTTGAAGTG
TATCAGCCTT GTTATATGTT CATAATGGGT TTTAACACCA TTTTGGGGCA AGTGATTGTT GGAAAATTTG TTCAAATGAA
TCAAATATCT TCTCCATATC TTGTCTTTCT TCCTTTCTAG ATTTTTGTAT GTCTTAGAGG AATGTTTCGT TTATACTGTC
AAATGGAGCT TTTATTGAAT CTCAATGTAC TCACTGTCAT GTTTTAGTCA CTTCAGTTGC TTTTGAAAAA TCTTTTACAT
AATGTATGTC TTCAAGATAA ACTATGACCT GTGCTCCTCA ATCATGAAGA ATTGAAAGAC ATTTGTCTAT GATATATTTT
CAATGTCATT GTTTCATTTG GAATTTCAGA TACATCTTTC CACCGTTAAA TTAATGCACT TGATTAGTTG ACTAGACTTC
AATAGTGTTG ATCTTGCTAT CAAAGCTTAA CTATCTTGTT AACACGAATT ATTTGTTGAT ATCAAGGTCA TATAGATTTC
GATTTGCTGA TTTTGTGTAC ATTTGTATTT AATGCCATTG TTTTTAAATG ATTTTCAGGT TGTTGATTCA GAAAGTATTG
AGGGGGAGGA TCAGGCATCT CAAATCACTA AATTTCTGGA AGGATACAGG GAAGGAAGAA CCATAAACAA AACATTCAGT
GGACCTTCGC TGATGCAATT CATTCATCGG TCTTTTGACA TTAGAATGGT ATACATAATT GTTTTTGTTG TGGCATTACT
GATACTTATT CAGAGCTTCA GTAAAGGAGG TGATGAGTAC CATGCTGTAC CAAATCAAGT TCAAGTTGAT CGTGCAAGCA
GTTCTGTTTC AGAAGCTGAA ATCAAAGAGT ATAAACCAGG TGACAAGGAA GACTAAATTA GCATGTAGAA TGATAATCGG
TGCACGTGAG CTTCTAGAAA CTAGCACCAT ACCTATTGGT ATGTGTAAAT ATTAATGAGT GTTAATCTCC ATATTTTTTT
AGTGCTGTTC AGACTGTTGC CTTTTTCTTT TACACTTTTT CATTTTGTTA ACATGAACCA AAAATGCCTA TTTATTACAT
TAAACATGAC AATGATGTGT TAGCTTTGTT ATTATTTTCA TCCTTCCTAG ATATTAGTAT TTATGCTCTT CATTTCACAT
TAATTTTACT TGAAAATTAA 

>Vigan.08G099700.01
GCCATGGTAA GGTCGTAATT TGCATAGTAA AGTGAAATTA AGTTTTAGTT TTAATCTAAT CCCACTTTGT GATCCGATCT
GATCCATGAG TAATGAAAAT TAAGCATGCA AAGTAGGAAA TAGAGGTTAG GAGGTTGAAA GGCGGAAAAC AGAGTTTTAA
GTGTTGTGTT GGGTCGTGTC GTGTTGGGAT CCGACACAAA CAAACGAGAG AAGATGACGA TGAGGGTTTC GGTTGTTTTA
AGTGTTCTGT TCTTGATCCA GTTTTGGCCT GGGGAAGCTG AGAAATTTTC GGTGGATGGA AAGGTTTTGA TTTTGGACGA
CTCCAACTTC GATTCCGCCA TAGCTTCCTT TGATCACATC TTGGTTGACT TTTACGCTCC CTGGTGTGGT CACTGCAAGC
GTCTTGCTCC CGAGTTAGAT GCAGCTGCGC CTGTACTTGC AACCTTGAAC AAACCCATTG TCATTGCAAA AGTAGATGCA
GACAAACATA CCAGCCTTGC AAAAAAATAT GATGTTGATG CATATCCAAC CATTTTGCTG TTTAATCATG GCATCCCCAC
CGAATACCGT GGACCAAGGA AGGCAGATTT ACTCGTTAGA TATCTGAAGA AGTTTGCTGC TTCTGATGTT TCCATTCTTG
ATTCAGATTC TGCCGTGAAT ACATTCGTTG CAGAAGCTGG ACCTTTTTTC CCCATTTTTA TAGGTTTCGG TTTGAAAAAC
ACGATAATAG AAAAGTTTGG CATAAAGTAC AAGAAAAATG CATGGTTTTC TGTGGCAAAG GACTTTTCAG AGGATCTCAT
GGTATTGTAT GACTTTGATA AGATTCCTGC ATTGGTTTCC CTGAATCCAC AGTACAATGA GCGGAACACA TTCTACGGAC
CCTTTGAAGA TGAATTTTTG GAAGATTTTG TTAAACAAAA CCTGATGCCT CTGGTCGTGC CGATATCCTA CGAAACACTT
AAGTTGGTGA AAGCAGATGG TAGGAAAGTA GTTTTGACCA TTGTTGAAGA TGAAGATGAA GAAAGATCAA GAGAATTGAC
TAAGTTATTG AAGGCTGCTG CATCTGCTAA TCGTGACTTA GTATTTGGTT ATGTTGGAGT CAAACAAATG GAAGAATTTG
CTGAGCAGTT TGATATTAGT ACTAAACTAC CAAAAATGGT GGTTTGGGAT AAAAGTGATG ATTACCTTTC AGTTGTTGAT
TCAGAAAGTA TTGAGGGGGA GGATCAGGCA TCTCAAATCA CTAAATTTCT GGAAGGATAC AGGGAAGGAA GAACCATAAA
CAAAACATTC AGTGGACCTT CGCTGATGCA ATTCATTCAT CGGTCTTTTG ACATTAGAAT GGTATACATA ATTGTTTTTG
TTGTGGCATT ACTGATACTT ATTCAGAGCT TCAGTAAAGG AGGTGATGAG TACCATGCTG TACCAAATCA AGTTCAAGTT
GATCGTGCAA GCAGTTCTGT TTCAGAAGCT GAAATCAAAG AGTATAAACC AGGTGACAAG GAAGACTAAA TTAGCATGTA
GAATGATAAT CGGTGCACGT GAGCTTCTAG AAACTAGCAC CATACCTATT GGTATGTGTA AATATTAATG AGTGTTAATC
TCCATATTTT TTTAGTGCTG TTCAGACTGT TGCCTTTTTC TTTTACACTT TTTCATTTTG TTAACATGAA CCAAAAATGC
CTATTTATTA CATTAAACAT GACAATGATG TGTTAGCTTT GTTATTATTT TCATCCTTCC TAGATATTAG TATTTATGCT
CTTCATTTCA CATTAATTTT ACTTGAAAAT TAA

>Vigan.08G099700.01
ATGACGATGA GGGTTTCGGT TGTTTTAAGT GTTCTGTTCT TGATCCAGTT TTGGCCTGGG GAAGCTGAGA AATTTTCGGT
GGATGGAAAG GTTTTGATTT TGGACGACTC CAACTTCGAT TCCGCCATAG CTTCCTTTGA TCACATCTTG GTTGACTTTT
ACGCTCCCTG GTGTGGTCAC TGCAAGCGTC TTGCTCCCGA GTTAGATGCA GCTGCGCCTG TACTTGCAAC CTTGAACAAA
CCCATTGTCA TTGCAAAAGT AGATGCAGAC AAACATACCA GCCTTGCAAA AAAATATGAT GTTGATGCAT ATCCAACCAT
TTTGCTGTTT AATCATGGCA TCCCCACCGA ATACCGTGGA CCAAGGAAGG CAGATTTACT CGTTAGATAT CTGAAGAAGT
TTGCTGCTTC TGATGTTTCC ATTCTTGATT CAGATTCTGC CGTGAATACA TTCGTTGCAG AAGCTGGACC TTTTTTCCCC
ATTTTTATAG GTTTCGGTTT GAAAAACACG ATAATAGAAA AGTTTGGCAT AAAGTACAAG AAAAATGCAT GGTTTTCTGT
GGCAAAGGAC TTTTCAGAGG ATCTCATGGT ATTGTATGAC TTTGATAAGA TTCCTGCATT GGTTTCCCTG AATCCACAGT
ACAATGAGCG GAACACATTC TACGGACCCT TTGAAGATGA ATTTTTGGAA GATTTTGTTA AACAAAACCT GATGCCTCTG
GTCGTGCCGA TATCCTACGA AACACTTAAG TTGGTGAAAG CAGATGGTAG GAAAGTAGTT TTGACCATTG TTGAAGATGA
AGATGAAGAA AGATCAAGAG AATTGACTAA GTTATTGAAG GCTGCTGCAT CTGCTAATCG TGACTTAGTA TTTGGTTATG
TTGGAGTCAA ACAAATGGAA GAATTTGCTG AGCAGTTTGA TATTAGTACT AAACTACCAA AAATGGTGGT TTGGGATAAA
AGTGATGATT ACCTTTCAGT TGTTGATTCA GAAAGTATTG AGGGGGAGGA TCAGGCATCT CAAATCACTA AATTTCTGGA
AGGATACAGG GAAGGAAGAA CCATAAACAA AACATTCAGT GGACCTTCGC TGATGCAATT CATTCATCGG TCTTTTGACA
TTAGAATGGT ATACATAATT GTTTTTGTTG TGGCATTACT GATACTTATT CAGAGCTTCA GTAAAGGAGG TGATGAGTAC
CATGCTGTAC CAAATCAAGT TCAAGTTGAT CGTGCAAGCA GTTCTGTTTC AGAAGCTGAA ATCAAAGAGT ATAAACCAGG
TGACAAGGAA GACTAA

>Vigan.08G099700.01
MTMRVSVVLS VLFLIQFWPG EAEKFSVDGK VLILDDSNFD SAIASFDHIL VDFYAPWCGH CKRLAPELDA AAPVLATLNK
PIVIAKVDAD KHTSLAKKYD VDAYPTILLF NHGIPTEYRG PRKADLLVRY LKKFAASDVS ILDSDSAVNT FVAEAGPFFP
IFIGFGLKNT IIEKFGIKYK KNAWFSVAKD FSEDLMVLYD FDKIPALVSL NPQYNERNTF YGPFEDEFLE DFVKQNLMPL
VVPISYETLK LVKADGRKVV LTIVEDEDEE RSRELTKLLK AAASANRDLV FGYVGVKQME EFAEQFDIST KLPKMVVWDK
SDDYLSVVDS ESIEGEDQAS QITKFLEGYR EGRTINKTFS GPSLMQFIHR SFDIRMVYII VFVVALLILI QSFSKGGDEY
HAVPNQVQVD RASSSVSEAE IKEYKPGDKE D*