GBrowse Details

Vigan.08G077700.01

Basic Information:
Name: Vigan.08G077700.01
Multiple alignment
Variant Information
Position: Chr08:6314981..6317687 (+ strand)
Length: 2707
Functional Information:
Description: Similar to Uncharacterized protein. [I1NGS7, Glycine max]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: DNA binding (GO:0003677)
Molecular Function: chromatin binding (GO:0003682)
Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705)
InterPro: SANT/Myb domain (IPR001005)
Homeodomain-like (IPR009057)
Myb domain (IPR017930)
Cytochrome P450, conserved site (IPR017972)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.02,0.41,0.03,0.43,0.00,6.63,0.13
Automatic updates:
Name: DQ822974 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max MYB transcription factor MYB94 (MYB94) mRNA, partial cds.
PubMed ID: -
Status: Known Variant
Name: NM_001254391 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max transcription factor LAF1-like (LOC100790724), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:6314981..6315177 (+ strand)
Length: 197
Type: five_prime_UTR
Position: Chr08:6315178..6315313 (+ strand)
Length: 136
Type: CDS
Position: Chr08:6316040..6316169 (+ strand)
Length: 130
Type: CDS
Position: Chr08:6316814..6317363 (+ strand)
Length: 550
Type: CDS
Position: Chr08:6317364..6317687 (+ strand)
Length: 324
Type: three_prime_UTR

>Vigan.08G077700.01 class=Sequence position=Chr08:6314981..6317687 (+ strand)
ATTAAGTAAT GGAAAAAGAA ATGCACAAGC ACGACTATTT CGTGGAATTT TTATATATAA GTCTGTTTGT GCACTGTTTC
CCTGTCAAAT ACTTTCCCTT CCTTCTCTTA GTCTTCTCTG CCACCTCTGT GAGTTCTGTT TTGGAGATTC CAATTCCAAG
CCTAACATTG AAGTGAAACT CTGTGAGGCA AGGCAAAATG GGGTGCCAGC CATTGGAAAA GGGAAAACCA AAACATAAGA
AGGGGTTATG GTCACCAGAA GAAGACAATA AACTCAGAAA CTACATCCTT AAACAAGGTC ATGGCTGTTG GAGTTCTGTT
CCCATTAAGG CAGGTTGGTT TCTTTCTTCT TTCCTGGTTG TGACCTTTTG TGAATCATAC TACAGTTAGC ATATTCCTTT
TATGTACTAT ACAAAGGGGC ATTATTCCTT ACTTTTAATA CTGTTATATT ATTAAATAAG AAAGGTCTTT CTTCCTTTAT
TTGAAAGTAT GTCTACTACT TATTTGAGCA AAGATTATGT TATCAAATTG AAATGTTGGC ATCTTTCACT TCAGTAAATT
TCAGATGTCT TAGTAAGCTC TTCTTTGCCC TTTGTTTGGA TTAATTCTAA TAAATTTATC CAATCAATTC TGCATATGAA
AAGGATACAT TGGTAGGGAA AAGTAATACT TGTGAATGAA GTGTATTTTT CAGACTAAGT TAAGCTAACT CTTCTTCATA
TGTCCTCAAA TTACACTAAA ACTCCAGTCT TTTAAAACTT TACACAAATT TTCTATTTTG AAAATATCAC TAAGACTTCT
TGACAAAAGA GACCACTGTA AAGATATAAA AAAGTTGATG ACTTGGTAGT TACTAAAAAT TAATAATCCT GCTTGCTAAA
GTAATTTGAT AATTCTGGCT TGCGTAATTT TAACATCTTA TGGTAAGACT AAACGGGCAT TTTGTGTAAA AGTATATTTG
CTGACAAAGA TCAAAAGTGT TTTAGTCAGA CCAACATGCA TTTATATAAT ATTTTCAATG TTTACCTGAC ATTGATGAAG
AAAATACATT TATTTGAAGG CTTGCAAAGA AGTGGAAAGA GTTGCAGACT AAGATGGATA AACTATCTGA GACCAGGACT
AAAGAGAGGG AAGTTCACCA AACAGGAAGA AGAGACAATC CTCACCCTTC ACCACATGCT AGGCAACAAG TAAGCCACAA
GAGTAAATCT TCTTTCACTT TATCAGTTTA AAAGTTTCAG TTTTATGACC AAGTTAACAC AGAATAAGTA AACTCTGTAA
TTTTCAGTCA AAAATATTGA AGACATGTCA GGAGTAGGTG TTAAATCTTA ATTGTGCATT AATTAGTATA AGAAGTTATG
CAAAGTAAAG GAAAAGACAA AGTCCCTTAG TTCAATATTT GAGGCTGAAG CTATAAAATG CAATTAGAAT TGGAAGGAGT
TTAATATTTG ATTCAGTTTT AGAAAAGCAA CTAGGGCATT TAAAATGAAA AGTAAAAGGA AAAATTTGAT AAGTAAGTCA
AGTCATGGAT TGGCTTAGAT GCCATGCTTC ATTTTTTAAA GAGGGATGAA CATTGAAAAC AATAAAAAAA GTCTTTTCAA
CTATTCCTCA GTTCTGTTGT ATATTAAATT TAAATCTAGT CCAATACCAT TTGTCTAGTG TTTCAGAGTG TCCCTTCTTA
TATTCCAATC AGTAAGACAA ACTATTCACA TAAAGAATGT GTGTCTGTAA AACTCAGAAC AGAAATTCAA ACTACTGTTT
AAACTCTTTG TCATAATTTC TCTCACATGT AGTGAAGATT GCTGAGAAAA ACTGGAATTA TATTATTGGG CAGGTGGTCA
CAGATATCAC AGCATTTGCC AGGAAGAACA GATAATGAGA TTAAAAACTA CTGGCATTCA TATTTGAAAA AGAAAGAGGC
AAAAGCTAAG GAAATGGATT CTCATAACCA AATAAAGTAT GCTAGCTCAA GCTCAGATAC CATGGAGTCT TCAAACTCTC
TCAAAAACCT TGCAACTCAA GGTACACAGA GTTGTAACTT CACCAAAGAG GCTAGCCAAA GCTCCTTGCC AAAACTGTTA
TTTGCTGAGT GGCTTTCATT GGATCAAGTA AACTCTGCAA ATTCAGTTGA CTCTTTTGGT TTGAGGAATG GATTTGATCA
AAATTCAACT CTTCAGGAGG CTGCAATCCA TGATATGTCA GATATACCCT TTGGTGGAGG GTACCATAGA TGCTTGGCTA
ACATTTCAGC CCCTGAGATT TTGAATTCAG AGCTGAAGTA TGCAAATCAG ATGGCGGAAA ATGGTTTCAT CCATTGTGTG
CCTGGAGTTG ACTTGATGAG TAGCAATTTC AGCATGAGCA ATGATGCGAT AATGTACATA TGAGAAGTAA GTTTCGGAGT
TGGTCAACAA AGAATAATAT CATTTTCTAA TTTTATACAT ACACAAAACA ATCAAACTTA AGCTATATAA AATAAAAGTT
GCATTCCAAG TTGTATGTTC TATTCTTCTA CCCACTTCCA ATTATTTCAA TGCGATACAG CTATGTAATT TCGTTTCAGT
TTAAGAAGTC AACTTCTGAT GGTCTTCGTT GTTTTTACAG AAAATCACAT TTGATTAAGT GCTATTTGGC TAATGTCTAC
AGTTTTGGAC ATGCATGTGA AAATTACTAC GAAATATCAC GCTAAGGTTA AAACGAAGTA ATTAAAT

>Vigan.08G077700.01
ATTAAGTAAT GGAAAAAGAA ATGCACAAGC ACGACTATTT CGTGGAATTT TTATATATAA GTCTGTTTGT GCACTGTTTC
CCTGTCAAAT ACTTTCCCTT CCTTCTCTTA GTCTTCTCTG CCACCTCTGT GAGTTCTGTT TTGGAGATTC CAATTCCAAG
CCTAACATTG AAGTGAAACT CTGTGAGGCA AGGCAAAATG GGGTGCCAGC CATTGGAAAA GGGAAAACCA AAACATAAGA
AGGGGTTATG GTCACCAGAA GAAGACAATA AACTCAGAAA CTACATCCTT AAACAAGGTC ATGGCTGTTG GAGTTCTGTT
CCCATTAAGG CAGGCTTGCA AAGAAGTGGA AAGAGTTGCA GACTAAGATG GATAAACTAT CTGAGACCAG GACTAAAGAG
AGGGAAGTTC ACCAAACAGG AAGAAGAGAC AATCCTCACC CTTCACCACA TGCTAGGCAA CAAGTGGTCA CAGATATCAC
AGCATTTGCC AGGAAGAACA GATAATGAGA TTAAAAACTA CTGGCATTCA TATTTGAAAA AGAAAGAGGC AAAAGCTAAG
GAAATGGATT CTCATAACCA AATAAAGTAT GCTAGCTCAA GCTCAGATAC CATGGAGTCT TCAAACTCTC TCAAAAACCT
TGCAACTCAA GGTACACAGA GTTGTAACTT CACCAAAGAG GCTAGCCAAA GCTCCTTGCC AAAACTGTTA TTTGCTGAGT
GGCTTTCATT GGATCAAGTA AACTCTGCAA ATTCAGTTGA CTCTTTTGGT TTGAGGAATG GATTTGATCA AAATTCAACT
CTTCAGGAGG CTGCAATCCA TGATATGTCA GATATACCCT TTGGTGGAGG GTACCATAGA TGCTTGGCTA ACATTTCAGC
CCCTGAGATT TTGAATTCAG AGCTGAAGTA TGCAAATCAG ATGGCGGAAA ATGGTTTCAT CCATTGTGTG CCTGGAGTTG
ACTTGATGAG TAGCAATTTC AGCATGAGCA ATGATGCGAT AATGTACATA TGAGAAGTAA GTTTCGGAGT TGGTCAACAA
AGAATAATAT CATTTTCTAA TTTTATACAT ACACAAAACA ATCAAACTTA AGCTATATAA AATAAAAGTT GCATTCCAAG
TTGTATGTTC TATTCTTCTA CCCACTTCCA ATTATTTCAA TGCGATACAG CTATGTAATT TCGTTTCAGT TTAAGAAGTC
AACTTCTGAT GGTCTTCGTT GTTTTTACAG AAAATCACAT TTGATTAAGT GCTATTTGGC TAATGTCTAC AGTTTTGGAC
ATGCATGTGA AAATTACTAC GAAATATCAC GCTAAGGTTA AAACGAAGTA ATTAAAT

>Vigan.08G077700.01
ATGGGGTGCC AGCCATTGGA AAAGGGAAAA CCAAAACATA AGAAGGGGTT ATGGTCACCA GAAGAAGACA ATAAACTCAG
AAACTACATC CTTAAACAAG GTCATGGCTG TTGGAGTTCT GTTCCCATTA AGGCAGGCTT GCAAAGAAGT GGAAAGAGTT
GCAGACTAAG ATGGATAAAC TATCTGAGAC CAGGACTAAA GAGAGGGAAG TTCACCAAAC AGGAAGAAGA GACAATCCTC
ACCCTTCACC ACATGCTAGG CAACAAGTGG TCACAGATAT CACAGCATTT GCCAGGAAGA ACAGATAATG AGATTAAAAA
CTACTGGCAT TCATATTTGA AAAAGAAAGA GGCAAAAGCT AAGGAAATGG ATTCTCATAA CCAAATAAAG TATGCTAGCT
CAAGCTCAGA TACCATGGAG TCTTCAAACT CTCTCAAAAA CCTTGCAACT CAAGGTACAC AGAGTTGTAA CTTCACCAAA
GAGGCTAGCC AAAGCTCCTT GCCAAAACTG TTATTTGCTG AGTGGCTTTC ATTGGATCAA GTAAACTCTG CAAATTCAGT
TGACTCTTTT GGTTTGAGGA ATGGATTTGA TCAAAATTCA ACTCTTCAGG AGGCTGCAAT CCATGATATG TCAGATATAC
CCTTTGGTGG AGGGTACCAT AGATGCTTGG CTAACATTTC AGCCCCTGAG ATTTTGAATT CAGAGCTGAA GTATGCAAAT
CAGATGGCGG AAAATGGTTT CATCCATTGT GTGCCTGGAG TTGACTTGAT GAGTAGCAAT TTCAGCATGA GCAATGATGC
GATAATGTAC ATATGA

>Vigan.08G077700.01
MGCQPLEKGK PKHKKGLWSP EEDNKLRNYI LKQGHGCWSS VPIKAGLQRS GKSCRLRWIN YLRPGLKRGK FTKQEEETIL
TLHHMLGNKW SQISQHLPGR TDNEIKNYWH SYLKKKEAKA KEMDSHNQIK YASSSSDTME SSNSLKNLAT QGTQSCNFTK
EASQSSLPKL LFAEWLSLDQ VNSANSVDSF GLRNGFDQNS TLQEAAIHDM SDIPFGGGYH RCLANISAPE ILNSELKYAN
QMAENGFIHC VPGVDLMSSN FSMSNDAIMY I*