GBrowse Details

Vigan.08G070100.01

Basic Information:
Name: Vigan.08G070100.01
Multiple alignment
Variant Information
Position: Chr08:5514005..5516758 (+ strand)
Length: 2754
Functional Information:
Description: Similar to Uncharacterized protein. [I1LDZ4, Glycine max]
InterPro: Domain of unknown function DUF3700 (IPR024286)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:28.23,54.84,51.46,27.96,65.79,46.71, 137.23,29.57
Arabidopsis thaliana homolog: AT3G22850.1
Automatic updates:
Name: NM_001248951 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100526912 (LOC100526912), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001248951 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max YGL and LRDR motif-containing protein (LOC100526912), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:5514005..5514249 (+ strand)
Length: 245
Type: five_prime_UTR
Position: Chr08:5514250..5514449 (+ strand)
Length: 200
Type: CDS
Position: Chr08:5515594..5515834 (+ strand)
Length: 241
Type: CDS
Position: Chr08:5515923..5516043 (+ strand)
Length: 121
Type: CDS
Position: Chr08:5516249..5516439 (+ strand)
Length: 191
Type: CDS
Position: Chr08:5516440..5516758 (+ strand)
Length: 319
Type: three_prime_UTR

>Vigan.08G070100.01 class=Sequence position=Chr08:5514005..5516758 (+ strand)
GGTCGTTGGA ACTTGCAACA GAGTGGTGTA CGATGGGCAT TGGCCATAGA AAAATTCAAA AAATTATCCA AAAAGAGAAG
GGGCATAATG GGTAAAAATT GAAGTGACGT TGAATTGCAG AGAAGCTTAT ATTTAGTTCG TCGCATCGTT CATTGTTTAG
GATCTGGTTT CGATTTCTGC TGCTGACTGC GTTTTATCTG TTGTATCATT TCACATCTTC ACACCCAACC AACCATCCAC
CAAAAATGTT GGCGGTTTTT GACAAATCGG TGGCAAAGAG CCCTGAGGGT CTTCAGAGCC CTCAATCAAA TTCCGTTTCA
GCCTTAAAAG ATGGGTTTCT CGCACAGCAC TTCTCTTCCG TTCACCCTGG TTCCGTCACC GTTAATCTTG GCACTTCGGG
TCTCCTCGCC TATTCTCTTC ACAAACAGAA CCCCCTTCTC CCAAGGTCCA TCATTTTCTC TTCTTTTTTC GATGTCTTAT
TTCCCCTTCA TTTTGGATCC AAAAGAAGGA CTCATTTGAG TGTTTGTTTC TTTATGTTCA TTTTCCTTAC CCTTTTATTT
TCATTATTTT TTTTTCCTTC TCGGGTCATC GTCTTAGACG TTTGAACTGA AGGGAGATTA AAGTTGATTC TTTTTCTTGG
TAAACTCATT AGGTTTCCGT TTTGTATTTC TTGATCTTGG AAGTAAATTT GTCGCCGATG TGTTTGTAAA CTCAACCTGC
TTGTTATTTT ATGTTTCTGA GTTTGAATCT CAACACTTTT TAGGATAACG GTGTGTAGTT GAAGCTTTCA TATTGCTTGA
CATTTTATTG TAGAATTCGA TTATTGATTA ATGGAAAATG TTGGATTCTT TTTTCTTTTC TTTTTATGTT CTTGAGAGTT
ATTCTTGTTT GTTTTCATCA TCTTGATCGT TATTGATTAT TATTGTTCTG GCTGGACCTT ACTTTGACCG AACATTAGAT
TTCATCTCCT TAGTTTATTA GCACGCGCGT GATTCTGTGT TTCAATTTTT ATTTTTATTT TTGTTCTGGC ATTATCTATC
TTGTTTCTGT TGATGGCATT AAGTCCGAAT ACAAGAAAAA AGTAGTAACT ACCATGTATG AGAATCCTTT AGATATAGCA
CCTCTTTTTA GCTTACTCAC AGATCTTAAA ATATATTTTG TTAGAATATT AACTGTGTAT TCTCAGTCCT CGCCCTTCCT
TTTGTCTTCC TTTCCCAGTT CCCACCAGTA GAAGTCATTC TAAGGTAGTT TTGCTGTACC ATTTGTAATC TTTCTACCTT
AGTCTTAACT GTTTTCTATT GCTTCTTGTT ATGTTACTTC AGTGGTTTTA ATGAGATCAA AGTAAGTTCA CATGTCACAA
CGTTGTAGTT CTTCAGCTTG AGCCTTAGAG CAATACCTAC CTAATCATTC CTGTTCAATG TTAATCTGAA ATTCTCCTCT
ACTTTCTCTT TGATCAGTAA AATGACAATT TTGAAAATCC TGAATTCTTG TCATCTAATT TTATGAAAGA AACTGGACAC
TATAAAGTTG TGAAAGATTT CTCTCGTTAA GATTACTCTC TTGATATACT GATTTTCTTA CGTTGCCAGG CTGTTCGCTG
TTGTGGATGA CATTTTCTGC TTGTTTCAAG GTCACCTTGA GAACGTTGCG AATCTTAAGC AACAATATGG ATTAAATAAA
ACGGCTACTG AGGTAACCAT TATCATAGAG GCATACAGAA CTCTAAGAGA TCGTGGTCCC TATCCTGCTG CTCAAGTTGT
GAGAGATTTC CAGGGAAAAT TTGCGTTTAT TCTGTATGAC AGTAGTGCTA ACACTGCATT TATTGCTGCA GTGAGTTATC
CTCGATTCAG CTCATTTCCT GTCTATTTGC CAATGTTTTT CTTTTCTAAC TTGAGATACA TATCCTGGTT GTTGAAAGGA
TGCTGATGGG AATGTTCCCT TTGCTTGGGG AACTGATGCC GATGGAAATC TTGTTCTTTC AGACGAGGCA GAGATCGTAA
CTAAGAGCTG TGGGAATTCC TTTGCACCAT TCCCCAAAGG TAATATTAAG ATTTGTTTTG AAAAGGCAAT CTGAACTAAA
TAAGAACCCA GTGCTGAACA TCACATCACC CTTAGGATCA CTCTAGTTGT GCTACAATTG ATGGTTTCTT TTCTTTCTGG
ACTACCATTG TGTAATCGTT TATTTTGCAA TTACGTTTGT TCCATATTGG GCATCAATGT AACATATTTG ATCCCCATGT
TCAGGATTTT TCTTTACAAC ATCCGGAGGA TTGAGCAGTT TTGAGCATCC ACTTAATGAG GTGAGGCCTG TGCCGAGGGT
TGGTAGTTCA GGACAGGTGT ATGGTGCCAA TTTCAAGGTG GATGCTGAGA CTAAGAAGGA ATCAACTGGC ATGCCAAGGG
TTGGGAGTGC TGCTAATTGG TCAAATAATA TATGATTGCG ACCCCGTTCT GTTTGAATTA AGGCTTTTAT CATAGCCGAT
TTCGGCTGAA TTTTAAAATT CTGGTTCTGT TCCCATAATT TTACTTTGAG GCTCTAGCGA GGCTTGGCTT ATCATATTAA
GCTATACAAT TTGCTTGGAG CAAATATTAC GCTCATTCTC TCTTGTCACA GGTCATGTAA TAATATCAAC TTGTGGACAG
GTTCATCCTA GAAATTATGA TTGTACGGCT TTTTTTTTTA TCTCGAATTT TAGCCATATC TGTACCATAC TTTGACCATT
AATATATAAT AATATGAAAA CAAGATCTCT CTAT

>Vigan.08G070100.01
GGTCGTTGGA ACTTGCAACA GAGTGGTGTA CGATGGGCAT TGGCCATAGA AAAATTCAAA AAATTATCCA AAAAGAGAAG
GGGCATAATG GGTAAAAATT GAAGTGACGT TGAATTGCAG AGAAGCTTAT ATTTAGTTCG TCGCATCGTT CATTGTTTAG
GATCTGGTTT CGATTTCTGC TGCTGACTGC GTTTTATCTG TTGTATCATT TCACATCTTC ACACCCAACC AACCATCCAC
CAAAAATGTT GGCGGTTTTT GACAAATCGG TGGCAAAGAG CCCTGAGGGT CTTCAGAGCC CTCAATCAAA TTCCGTTTCA
GCCTTAAAAG ATGGGTTTCT CGCACAGCAC TTCTCTTCCG TTCACCCTGG TTCCGTCACC GTTAATCTTG GCACTTCGGG
TCTCCTCGCC TATTCTCTTC ACAAACAGAA CCCCCTTCTC CCAAGGCTGT TCGCTGTTGT GGATGACATT TTCTGCTTGT
TTCAAGGTCA CCTTGAGAAC GTTGCGAATC TTAAGCAACA ATATGGATTA AATAAAACGG CTACTGAGGT AACCATTATC
ATAGAGGCAT ACAGAACTCT AAGAGATCGT GGTCCCTATC CTGCTGCTCA AGTTGTGAGA GATTTCCAGG GAAAATTTGC
GTTTATTCTG TATGACAGTA GTGCTAACAC TGCATTTATT GCTGCAGATG CTGATGGGAA TGTTCCCTTT GCTTGGGGAA
CTGATGCCGA TGGAAATCTT GTTCTTTCAG ACGAGGCAGA GATCGTAACT AAGAGCTGTG GGAATTCCTT TGCACCATTC
CCCAAAGGAT TTTTCTTTAC AACATCCGGA GGATTGAGCA GTTTTGAGCA TCCACTTAAT GAGGTGAGGC CTGTGCCGAG
GGTTGGTAGT TCAGGACAGG TGTATGGTGC CAATTTCAAG GTGGATGCTG AGACTAAGAA GGAATCAACT GGCATGCCAA
GGGTTGGGAG TGCTGCTAAT TGGTCAAATA ATATATGATT GCGACCCCGT TCTGTTTGAA TTAAGGCTTT TATCATAGCC
GATTTCGGCT GAATTTTAAA ATTCTGGTTC TGTTCCCATA ATTTTACTTT GAGGCTCTAG CGAGGCTTGG CTTATCATAT
TAAGCTATAC AATTTGCTTG GAGCAAATAT TACGCTCATT CTCTCTTGTC ACAGGTCATG TAATAATATC AACTTGTGGA
CAGGTTCATC CTAGAAATTA TGATTGTACG GCTTTTTTTT TTATCTCGAA TTTTAGCCAT ATCTGTACCA TACTTTGACC
ATTAATATAT AATAATATGA AAACAAGATC TCTCTAT

>Vigan.08G070100.01
ATGTTGGCGG TTTTTGACAA ATCGGTGGCA AAGAGCCCTG AGGGTCTTCA GAGCCCTCAA TCAAATTCCG TTTCAGCCTT
AAAAGATGGG TTTCTCGCAC AGCACTTCTC TTCCGTTCAC CCTGGTTCCG TCACCGTTAA TCTTGGCACT TCGGGTCTCC
TCGCCTATTC TCTTCACAAA CAGAACCCCC TTCTCCCAAG GCTGTTCGCT GTTGTGGATG ACATTTTCTG CTTGTTTCAA
GGTCACCTTG AGAACGTTGC GAATCTTAAG CAACAATATG GATTAAATAA AACGGCTACT GAGGTAACCA TTATCATAGA
GGCATACAGA ACTCTAAGAG ATCGTGGTCC CTATCCTGCT GCTCAAGTTG TGAGAGATTT CCAGGGAAAA TTTGCGTTTA
TTCTGTATGA CAGTAGTGCT AACACTGCAT TTATTGCTGC AGATGCTGAT GGGAATGTTC CCTTTGCTTG GGGAACTGAT
GCCGATGGAA ATCTTGTTCT TTCAGACGAG GCAGAGATCG TAACTAAGAG CTGTGGGAAT TCCTTTGCAC CATTCCCCAA
AGGATTTTTC TTTACAACAT CCGGAGGATT GAGCAGTTTT GAGCATCCAC TTAATGAGGT GAGGCCTGTG CCGAGGGTTG
GTAGTTCAGG ACAGGTGTAT GGTGCCAATT TCAAGGTGGA TGCTGAGACT AAGAAGGAAT CAACTGGCAT GCCAAGGGTT
GGGAGTGCTG CTAATTGGTC AAATAATATA TGA

>Vigan.08G070100.01
MLAVFDKSVA KSPEGLQSPQ SNSVSALKDG FLAQHFSSVH PGSVTVNLGT SGLLAYSLHK QNPLLPRLFA VVDDIFCLFQ
GHLENVANLK QQYGLNKTAT EVTIIIEAYR TLRDRGPYPA AQVVRDFQGK FAFILYDSSA NTAFIAADAD GNVPFAWGTD
ADGNLVLSDE AEIVTKSCGN SFAPFPKGFF FTTSGGLSSF EHPLNEVRPV PRVGSSGQVY GANFKVDAET KKESTGMPRV
GSAANWSNNI *