GBrowse Details

Vigan.08G002400.01

Basic Information:
Name: Vigan.08G002400.01
Multiple alignment
Variant Information
Position: Chr08:157631..164324 (+ strand)
Length: 6694
Functional Information:
Description: Similar to Uncharacterized protein. [I1NJD8, Glycine max]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: iron ion binding (GO:0005506)
Molecular Function: oxidoreductase activity (GO:0016491)
Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705)
Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (GO:0016706)
Molecular Function: L-ascorbic acid binding (GO:0031418)
InterPro: Oxoglutarate/iron-dependent dioxygenase (IPR005123)
Prolyl 4-hydroxylase, alpha subunit (IPR006620)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:7.99,6.95,9.99,8.33,16.05,10.57,14.45,6.98
Arabidopsis thaliana homolog: AT2G43080.1
Structure :
Position: Chr08:157631..157675 (+ strand)
Length: 45
Type: five_prime_UTR
Position: Chr08:157676..157805 (+ strand)
Length: 130
Type: CDS
Position: Chr08:158103..158150 (+ strand)
Length: 48
Type: CDS
Position: Chr08:158293..158361 (+ strand)
Length: 69
Type: CDS
Position: Chr08:158817..158869 (+ strand)
Length: 53
Type: CDS
Position: Chr08:159303..159368 (+ strand)
Length: 66
Type: CDS
Position: Chr08:159526..159600 (+ strand)
Length: 75
Type: CDS
Position: Chr08:160272..160346 (+ strand)
Length: 75
Type: CDS
Position: Chr08:160885..160955 (+ strand)
Length: 71
Type: CDS
Position: Chr08:161038..161089 (+ strand)
Length: 52
Type: CDS
Position: Chr08:161207..161296 (+ strand)
Length: 90
Type: CDS
Position: Chr08:161508..161600 (+ strand)
Length: 93
Type: CDS
Position: Chr08:163794..163901 (+ strand)
Length: 108
Type: CDS
Position: Chr08:163902..164324 (+ strand)
Length: 423
Type: three_prime_UTR

>Vigan.08G002400.01 class=Sequence position=Chr08:157631..164324 (+ strand)
CCCGAAGAAG TGGTGGATTG GCAGAGGCAA AGGAGCATAA AAGCAATGGG CGTTAAAAGC GGTTTGTCAT TTTTGTTCTT
TGAGACCAAA AGACATTTCA TTTTCAACTC CATGGCTCCC TCCATGAGAA TTGTCTTCGG TCTTCTCACT TTCGTCACCG
TCGGAATGAT TATAGGTATT TTCACTCTTC TCTTTTCTTC CGTTTCTTGC AATCATCTTC ACAAACCCCC ATCTCCCGCT
GCAAATCATG ATGTATTTCC TTTCCGATTT CTTCTTCTTC TTCTTCTTCT TCTTCTTCAA TACACGCTCT CACTTGATCC
ACATTTCAGA GACACCAGAA GCTTCCAAAT GCACGCTTTC TTGCTCTTTC TTCTTCTATC TTCCCGCACT GCCCTAAATC
ATCACATATC TCAACAATCA TATCCTATTA CTCTTGAATT GACACTCACA AAACCTCTTG TTTACATTGC AGGTGCTCTC
TCTCAGTTGG CTTTCATTCG AAAATTGGAA GACTCATACG GTATCGTATC CTACCTTTCT TCTTTAACGA GTTGAAATGA
AACTAATAGG GGACTTATCA CAGGGGATAT TTGACCAAGA TTTTTTATAT GCTTTTCTTG ATTATTATTC TTGTATTCTG
TTAGCCTAAC TGGTTCGTGC AGGCTCTGAT TCTTTGCCAT TTAGAAGATT GCGTGGACTC GAAGGTGACG GTTACCTTCA
ATTGCCAAGA GGTCCGTGTT ATTTTTGTTT TTCTTACTGT ATCAGAGTCG TTGCTTTATG TACAATTTCT CAAAGATTAT
TTCTTTGATT GCATTTGGTG CCTATTTTAA TCACTTCAGA GTGCTTGGTA CCTGCTAAGT TAGTTCCACG GCTGCTAACA
TTTATTTATC ACATACGGTA TATATTTAAT TCTGTGTTTC CACCGTGTGC AATGCTTTAC CTTAACAATA AAATGTAGTA
TTGTATCAAT CTGTTTATTT CAATTCTTGA CTAAGTTTTG AAACGTTTCG TGGCTGAGTC TTCTAGATAT AATATTTGTT
TTTTTTCAAT CATTTGTAAC ACAAAAATAT ATTTGTTATT AGTTATTCCA TCAGTGTATT TCAGTTTTAC ATATTTTTAA
AGTTGTTAAT AACTTGCAAT TTTTTTCATT GGAACTTCTT TTTCAACCAT TTCTTTTGAT TTTCAGGTAT TCCTTTTTGG
AATAATGACA AGGAAGCAGA AATCTTACGC CTTGGATATG TATGTCTGTT GTCCTCCCTT TCTTCTGCTA AACTTTTATA
TTTACATGTT TTCTCAGCCT CATCCTCTAT GATAGAATCA CACACAGACC ATCAAGTAAA ATAAATGTTT AAAATATTAT
TGCTTTTACA TTTGGTGCAA ATATATAAAA TTGTAATTCC AATTCGAAAG ATACAATAAG ATTAAAGTTC GCTTCTCTGT
TCAATTAAAT GCTTGGTTAA AGAATACTTG ATTGCACTCT GAGTGACCAA TATCTATGTC ATTCTGTCTA ATAATTTACG
TTTAAAGCCT TGATATCAGT CTGTGTTGTC TGAATAGCCA GTTTATTTTC TTTTTTCAGT GGATTTCTTT TGCTATTCTC
ATTTTTTTGA GAAATGAATA GATTTGCGTG CTTCAATTTT TATTATTATT CCCGTCTGAT CCTCAATCGT AGGTCAAACC
TGAAGTGATT AGCTGGTCTC CTCGAATTAT TGTACTTCAT AACTTCTTGA GTTTAGAGGT ATGCTATCTC TACTAAATGC
TGTTTTTCAT TATTAAAATG TTTCTTGAGG TCAAATACCT GGGCAATTAA CAATACTTTT AAAATATTCT TTTGCTTAAT
AAAAAATGTA CTGATGATGA CCGTATGTAT GTATTAAAAT TATTTTATCT TACAGGAATG TGATTATCTC AGGGCTTTAG
CTCTCCCTCG CTTGCAAATT TCAACTGTGG TTGATACGAA AACCGGAAAG GTACACTAAC AATTTCTGTT TGAATTTCAA
TTTGACTGAT CATAATCATC AATACATGCT AGGTGATGAG ACAGGGTTTA AGTTTCAATA TGCCTAAGTG AAGTATTGCC
ATATTCTCCG AGGGAAAATT TTTGTATGTA TGATGAATTT GAAATAAAAT ACTAAATGCC TTTTAGGAAG ACAATGTGCA
CATGCATATT CAGGAGCTTG TTATTTTGTT ACATTTGAAC CTTCTATATT GTTGAATTCT TTTAGAACCA GTTCACTTTA
TGACTCTGGT TTTTATTTCT TCTCCTTCAT GAATAAATTA TATTTTTTTA AACTATTAAA TGGTTTCATC TGTGGGTGGG
AGAACCTTTC TCACAGAAAA TATGCAATAT TGGGCTAGAA AAGAAGATAA GTGAGAAGTT TTCAAATTTA AAAAGAAGAA
TTTCATGCTT CAAATCTAGT GCTGAATCCA TTTTAAGAGT TATTTAGAAA TTATTGTCTG ATCTTCTCTG TGGACTACCC
CTCTATTTGG CAAGTTATTT GATCCTTTCG ACAAAAGTAC CCCACAATTG GAGATTATGA AGCTTGTAGA AACAAAGTCG
TACAGAGTGG TTTAAGTCTA TGGAGTCATT TGCATCTATG AACATGTATT TCTTCATTAA ATGTGATATT TCTGTCCATA
GGGAATCAAG AGTAACGTCA GGACCAGCTC TGGTATGTTT TTGAATCCTC AAGAAAGAAA ATATGCTATG GTACAAGTAA
GTTAACAATT TTACTCCCTC AAATCTTTTA TTTCAATCAT CAAAGCAGTG TAAAATACAC GGACTGTGTG ACCATAACCT
TGGAAAAGTT TTTGTACTCC GATACATACT ACATTGTTTT TCATGGAGGT AGCTGGTTCA CCTTGTTGGG TGTTTATTAG
TGACCTCTGA CCTATTTTGT TTTTGAAAGT TGAAATATTG TACCAACCCT GGTTTTGGTC ACATCACAAT CATGAAGAGT
TATATTGATT CCGAAATGTA TAAATCTGAT CATAGAAAAG ACTGAAAGTG TTGCCACTGT TTAAATCAAG GGTGGGCATG
GTTTGGGTTT CAGTAAATAA GTTCAGAGCG TGTTTGGATT CCAGTGAACC AATTACAAGA TTCAGTTTTA AACATATGAA
CTAGTTTAGT TAGTAGACTA TATATATATA TATAGGCAAA CACACACACA TACGTATATT TTACACAAAA TCGTACTTTA
TTAAGTAATT TTAACTGTAC AGTCTGATCA ACTATGGTCA CCTTGCTCAT CTAGGCAATT GAAAAAAGAA TCTCTGTCTA
TTCTCAAATA CCAATTGAGA ACGGTGAGCT TATGCAAGTC TTGAGGTGAG AATATGACTT ATTTTTTCAC TCTATCTGAA
CATTTGTGGG TTTGCTAGTA TTAAGGCTAA CGTCTGCAGC AGCACAGGTA CGAGAAGAAT CAATATTACA AACCTCATCA
TGACTATTTT TCTGACACTG TAAGTTGTAT TTGCTCTTAT TTTAATTTTC AAATTGTAGT CCACATGTGC ATTTCCTTGA
AGTGGCTTCT TTGAAACCCT ATTTGCGACC TGTTTTGCCT TTCCTTTTTG TGACAGTTCA ACTTGAAGCG TGGTGGGCAG
CGAATAGCCA CAATGCTTAT GTATTTGAGT GACAATGTTG AAGGAGGAGA AACATATTTC CCATTGGTAA GCTTCTTGTT
TTCTGAAATT TGTTATGTCA CTTATTTTGG TAGCTGTTGT GTACTCTTTT TGGACACGGA ATAGAAGTAT GCTCAATTTG
TAACATGCTA GTATTAGCTA TCTATTCCGT GTTAGGTGTT GCCTACTGTA TCTGTCACTC TTTTCGGACA TTTTGATTGT
ACTGATGCTG TTGTTTATAA TATACAATAT GATTCAGGCT GGTTCAGGTG AATGTAACTG TGGTGGGAAA CTTGTCCAAG
GGCTATCTGT CAAGCCAACT AAAGGAAATG CTGTGCTTTT CTGGAGTATG GTGAGTGCAG TTAATTTACT TATTATGGAC
GCTATCCATG TTAATTATGA AATAGGAACA ACTATTTCCA TAATTGTTCT AGTACTTTTA TGTGTCTTTA AGATTGTACC
TTTAGGCCCA AGAGACAGAA TATGTATCTT TGATCATCTG CAAGTGCATG TGTCATTGCT AAAGAGTCCA TGGTATCAAA
TAACCAATTA CTACAAAAGA AAATTACCAA ACTAATTAGT ATAAGCATAA GGCGCAAAGA GTAACCATAG TGTTTAAGTG
ATAAATTCAA GATTACAAGA ACCAATCTAC TTTTTCTATG TAAAAACAGA GTTTAAGAGT AGATTCATGT TTACCCCTTT
TTACCCATTG ATTGGTTTTG AATGATGGCT CCTATCTGGG CCACTGGTTA TATGCCTATC CCATCGGTTA ATAAACTCAT
CCAAGACAAA GGTGTAAATA CATAAACATT GTTCACAACA ATGGTCTTAA TCCTTTAGGG TTTACCCAAA TCAACATAAT
TGTTGTTCAA ACTACTAAGA TCATTAAACA TAGATATTGA TGGAAACCTC CCATGGCATT TGGGAAGATC TATCAACTTC
AAGTATTTTT TCAACTAAGA AATCGTAGAA AACCCAAGAG TAGCTATATC TTGGGTTTAG CCAACACAAA CAAGAAAAAC
AGAGGTTTAA AGTTAAATGT TGAAAAGATG TAAGAAGATA AATTAACTCA AGATAAAAGC AAAAGAGAGA AAATCAAGTT
CTTCAAGAGA GAACACAAGA TAAAAGTCGT AGAGAAACCA ATAAGCCGAA CTAGAAGTGT GTTGGAGAAG CTAACGAAGC
TCTAAATACA TTGATTTTGA ACATATACTA ATCTAACTTC CAGAGGAAGC ATCTACAAGG AAGTTAGACA AATAATAAAA
ATGAAATTCT CCTGTCCAAT TGGACGTCTA CCTTTGTAGC TTTTAGGGGA AGCTCGCAGG TTAGTTTGGG AAGTTAATGA
AACCATGATT TCTTCATTAA TGCCTCTATC CCCATGAGCT TGAATTCTGA ATCCTGATCT AGGAGCATGT TTCCCGTTAA
TGATTGGCTT TTACCAACAG GAGAACTAAT TTCCTATAGT GAAGTCTACA TTAAAGAAAG CTACTCCTTA GTTTATATTT
GGTAAATAGA TTTCTCCCAA CATGATCTCA AACAAGAAAG AATATTATTT TTACTCAAGA ATATTCTCGT CTTTTCTGAT
TTGATGTATA CTCTTCCTAA CTCCTCTTCA AGCTCCTTGC CATAAGTTTG GCTCTTGTTA GTCTGCCTTT AGTAGTATCT
GAAATTGTTG AATTCTTTCT TCATTCTCTT TTTCCTTTGC CATAGATCTT GTAGTGACTC CTTGCATGTT GTCTACTCTT
CCTAAGCCTC CATGTCTCTA GTGTATTTTT TTTCTGTATC ATCTTTTATG CATCTTAAAT TTACACATCA CATATTCTTG
TTTTTCATAA TTGAAACAAC TATCTCTCTA ACCCAACATT TATAAAGCTC TGTTTGATAT AGAGGAGAGA ATAATATAAA
TGAAAATAAA AAGGTTGAGT GACTATAGAT GAAAAATAAA GTAAAAGTTA AAAGGTGTTT TGTTGAAGAG AAATAGAAAG
AGACGAGTAG TGAGATGGAG AGAACGGAAA TAGAGTGGAA AAGTAGTAGT GACCTACTCA ATTTTAGTGT TGCCTTCCTT
TTTTTCTTTC CTACCAAACA AACAAAATTA AATTCACTGT CGCCATTTTC ATTACTACCC CTCCTTACCA AACATATCAT
AAAAACTTTT ATTGAATGAT CCCTGCTTCC TAGATTTTCT TAATGTTAAC ATTTTTTAAT TACATAAACT TAGTTTTGTA
GCATCTGACC CCATAAATAT ACAAGCGCTG GTGCTTAATA AGACGCTTTT ACCATTACAT ATTGTCAAGA ACCGGTGCTA
GATAGGAAGA ACCAGTATAA GAATGAAGGA TAGAGATGCC TCTATAGGTT TTCTTTTATA TATATTTTTT CAATTTGTAC
TCATCATAGG ATTTAGTTGG TTTATCAATT GGGCAGCGCG TAGTATTTTG TGATAGAAAA TGTCAATGGT CAGGCTATTG
AATATGGAGA CTGTAACTGT TAGTATTGTG CATTTTTTCA AACGAAGATT TACGGTGAAA ATTTTCGTAT TTGATCTTGG
CAGGGATTGG ATGGTCAATC AGATCCCAAA AGTGTGCATG GAGGATGTGA GGTAATCTCT GGGGAGAAGT GGTCAGCTAC
GAAGTGGATG AGGCAGACCA CTCACTCTTG ATTTCTTATC CACCGTCTCC TGCAAACAAA AATTCACTAA TTTGGATCTT
GTCCTTATAA AAAATAATGA TTAAGATTAG TTATTGATAT TAGAAATATT CATTAGTGTT AACTTAAATT AATAAACTGC
GGCGTAATCT CATATTAGAT GTTCCAGGTA TTATGTTTCT GTTTAACATT TTGTCAGGTC GGGATGTTGA TTCGAAGAGA
CTGACCTAAA GATTTCTCAT TGAAATATTC GTAAATGGAC TAAATCTTTT TTATCCACCC TCATAATCCC TTGACCCCTT
CTACACCATA CCATATAATT AGGCTGTTAG CCAATATCAC AACCAAAGGC TACGATAAAG GCACCTGAAC CACTACCTTT
GAACAGTGTA TTATTTCCCA TAGTAAAGAA GTTGTGTTTC ACAAATGTTT TTTT

>Vigan.08G002400.01
CCCGAAGAAG TGGTGGATTG GCAGAGGCAA AGGAGCATAA AAGCAATGGG CGTTAAAAGC GGTTTGTCAT TTTTGTTCTT
TGAGACCAAA AGACATTTCA TTTTCAACTC CATGGCTCCC TCCATGAGAA TTGTCTTCGG TCTTCTCACT TTCGTCACCG
TCGGAATGAT TATAGGTGCT CTCTCTCAGT TGGCTTTCAT TCGAAAATTG GAAGACTCAT ACGGCTCTGA TTCTTTGCCA
TTTAGAAGAT TGCGTGGACT CGAAGGTGAC GGTTACCTTC AATTGCCAAG AGGTATTCCT TTTTGGAATA ATGACAAGGA
AGCAGAAATC TTACGCCTTG GATATGTCAA ACCTGAAGTG ATTAGCTGGT CTCCTCGAAT TATTGTACTT CATAACTTCT
TGAGTTTAGA GGAATGTGAT TATCTCAGGG CTTTAGCTCT CCCTCGCTTG CAAATTTCAA CTGTGGTTGA TACGAAAACC
GGAAAGGGAA TCAAGAGTAA CGTCAGGACC AGCTCTGGTA TGTTTTTGAA TCCTCAAGAA AGAAAATATG CTATGGTACA
AGCAATTGAA AAAAGAATCT CTGTCTATTC TCAAATACCA ATTGAGAACG GTGAGCTTAT GCAAGTCTTG AGGTACGAGA
AGAATCAATA TTACAAACCT CATCATGACT ATTTTTCTGA CACTTTCAAC TTGAAGCGTG GTGGGCAGCG AATAGCCACA
ATGCTTATGT ATTTGAGTGA CAATGTTGAA GGAGGAGAAA CATATTTCCC ATTGGCTGGT TCAGGTGAAT GTAACTGTGG
TGGGAAACTT GTCCAAGGGC TATCTGTCAA GCCAACTAAA GGAAATGCTG TGCTTTTCTG GAGTATGGGA TTGGATGGTC
AATCAGATCC CAAAAGTGTG CATGGAGGAT GTGAGGTAAT CTCTGGGGAG AAGTGGTCAG CTACGAAGTG GATGAGGCAG
ACCACTCACT CTTGATTTCT TATCCACCGT CTCCTGCAAA CAAAAATTCA CTAATTTGGA TCTTGTCCTT ATAAAAAATA
ATGATTAAGA TTAGTTATTG ATATTAGAAA TATTCATTAG TGTTAACTTA AATTAATAAA CTGCGGCGTA ATCTCATATT
AGATGTTCCA GGTATTATGT TTCTGTTTAA CATTTTGTCA GGTCGGGATG TTGATTCGAA GAGACTGACC TAAAGATTTC
TCATTGAAAT ATTCGTAAAT GGACTAAATC TTTTTTATCC ACCCTCATAA TCCCTTGACC CCTTCTACAC CATACCATAT
AATTAGGCTG TTAGCCAATA TCACAACCAA AGGCTACGAT AAAGGCACCT GAACCACTAC CTTTGAACAG TGTATTATTT
CCCATAGTAA AGAAGTTGTG TTTCACAAAT GTTTTTTT

>Vigan.08G002400.01
ATGGGCGTTA AAAGCGGTTT GTCATTTTTG TTCTTTGAGA CCAAAAGACA TTTCATTTTC AACTCCATGG CTCCCTCCAT
GAGAATTGTC TTCGGTCTTC TCACTTTCGT CACCGTCGGA ATGATTATAG GTGCTCTCTC TCAGTTGGCT TTCATTCGAA
AATTGGAAGA CTCATACGGC TCTGATTCTT TGCCATTTAG AAGATTGCGT GGACTCGAAG GTGACGGTTA CCTTCAATTG
CCAAGAGGTA TTCCTTTTTG GAATAATGAC AAGGAAGCAG AAATCTTACG CCTTGGATAT GTCAAACCTG AAGTGATTAG
CTGGTCTCCT CGAATTATTG TACTTCATAA CTTCTTGAGT TTAGAGGAAT GTGATTATCT CAGGGCTTTA GCTCTCCCTC
GCTTGCAAAT TTCAACTGTG GTTGATACGA AAACCGGAAA GGGAATCAAG AGTAACGTCA GGACCAGCTC TGGTATGTTT
TTGAATCCTC AAGAAAGAAA ATATGCTATG GTACAAGCAA TTGAAAAAAG AATCTCTGTC TATTCTCAAA TACCAATTGA
GAACGGTGAG CTTATGCAAG TCTTGAGGTA CGAGAAGAAT CAATATTACA AACCTCATCA TGACTATTTT TCTGACACTT
TCAACTTGAA GCGTGGTGGG CAGCGAATAG CCACAATGCT TATGTATTTG AGTGACAATG TTGAAGGAGG AGAAACATAT
TTCCCATTGG CTGGTTCAGG TGAATGTAAC TGTGGTGGGA AACTTGTCCA AGGGCTATCT GTCAAGCCAA CTAAAGGAAA
TGCTGTGCTT TTCTGGAGTA TGGGATTGGA TGGTCAATCA GATCCCAAAA GTGTGCATGG AGGATGTGAG GTAATCTCTG
GGGAGAAGTG GTCAGCTACG AAGTGGATGA GGCAGACCAC TCACTCTTGA 

>Vigan.08G002400.01
MGVKSGLSFL FFETKRHFIF NSMAPSMRIV FGLLTFVTVG MIIGALSQLA FIRKLEDSYG SDSLPFRRLR GLEGDGYLQL
PRGIPFWNND KEAEILRLGY VKPEVISWSP RIIVLHNFLS LEECDYLRAL ALPRLQISTV VDTKTGKGIK SNVRTSSGMF
LNPQERKYAM VQAIEKRISV YSQIPIENGE LMQVLRYEKN QYYKPHHDYF SDTFNLKRGG QRIATMLMYL SDNVEGGETY
FPLAGSGECN CGGKLVQGLS VKPTKGNAVL FWSMGLDGQS DPKSVHGGCE VISGEKWSAT KWMRQTTHS*