GBrowse Details

Vigan.08G001200.01

Basic Information:
Name: Vigan.08G001200.01
Multiple alignment
Variant Information
Position: Chr08:58764..64742 (+ strand)
Length: 5979
Functional Information:
Description: Similar to 5-methylthioadenosine/S-adenosylhomocysteine deaminase-like isoform X2. [XP_004497427.1, Cicer arietinum]
GO: Molecular Function: hydrolase activity (GO:0016787)
Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds (GO:0016810)
InterPro: Amidohydrolase 1 (IPR006680)
Metal-dependent hydrolase, composite domain (IPR011059)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:50.11,41.95,23.06,19.14,26.41,17.20, 18.51,26.11
Structure :
Position: Chr08:58764..58876 (+ strand)
Length: 113
Type: five_prime_UTR
Position: Chr08:58877..59081 (+ strand)
Length: 205
Type: CDS
Position: Chr08:59169..59500 (+ strand)
Length: 332
Type: CDS
Position: Chr08:61193..61342 (+ strand)
Length: 150
Type: CDS
Position: Chr08:61610..61753 (+ strand)
Length: 144
Type: CDS
Position: Chr08:61947..62103 (+ strand)
Length: 157
Type: CDS
Position: Chr08:62475..62647 (+ strand)
Length: 173
Type: CDS
Position: Chr08:63339..63394 (+ strand)
Length: 56
Type: CDS
Position: Chr08:63771..63873 (+ strand)
Length: 103
Type: CDS
Position: Chr08:64427..64516 (+ strand)
Length: 90
Type: CDS
Position: Chr08:64517..64742 (+ strand)
Length: 226
Type: three_prime_UTR

>Vigan.08G001200.01 class=Sequence position=Chr08:58764..64742 (+ strand)
ATTAGATAAC CCCCCGCCTT GACTTTGAAG ATACTGATTC AAGAAGAAAA AGTATAAAAT AAGTATACAT TTGTAGAGTA
AAGTAACCAA GAGAGGAGAA AGGGGCGGTG GAGATGGAGA GAGAGAGGGA GGTGGTGAGT GTGCTGCACG GTGGTATGAT
CATAACCATG GACGAGGAGC AGCGAGTGTT TAGGGACGGG GGAATCGTGA TCGAAGGAGA TAGAATCAAA GCTATTGGAC
AATCTGCACA AATTCTTGCT GAATTTTCTG ATGTGGCCCA CCACATCCTC GATCTCACCG GCCACATCTT ACTCCCTGGT
TCTCGCTCTC TCTTTCCTTT TTTCTGTTTG ATATTGCTAT GAAATGAAAT GAAAATTTAA ATAATCTAAA GCAGTAGAGT
GACAGGATTT ATTAACACCC ACGTCCATAG TTCCCAACAA CTCGCTAGAG GCATAGCCGA TGATGTGGAC TTGATGACCT
GGTTGCATCA CCGCATCTGG CCCTACGAAT CCAACATGAC CCAACACGAT TCTTACCTCT CTACTTTGCT TTGCGGGATC
GAGCTCATTC ACTCCGGCGT AACCTGTTTT GCTGAAGCTG GGGGTCAACA TGTGTCTGAA ATGGCTAGAG CAGTCAGTTT
ACTGGGTCTG CGAGCTTGTT TAACCCAGTC CACCATGGAC TCTGGCCACG GTTTGCCTCC ATCCTGGGCC ACTCGTACCA
CGGATCAATG CATTCAGGTC TCTCTCTATT CAAACTCCCA ACTAATATGA TTTATTATTC AGTGATGATT ACAAAAGTGA
ACCAACTTCT TACCAAAGCC AATATATATA TATATATATA TATATATATA TTGCACAATG GATGGATGGT TGTAACAAAC
TACAATAATA ACAGTAGCTG TTCAGAAACT GTTAACTAAA AGAAATAGTT GAGATATTAC TAAAACCATA GAGAAGTTTA
TCTCTAACAC TCCCCACAAG CTCAAGGTGG ATGTGAAACA ATAGGCAACT CAACCACATT GAGCTTGGAT CTAAGAAAAA
GAACTCTTGT TGGTAAAAGC GGCTTGGTTA GTAAACGGTC CATTGATCTG CACAACGAGA TGCTTGGCTA GAAGAGCACC
AACAACATAC CTAGAGAAAG ATGGGATAAG AAGAAAATCT GCACCCTGTT TTGAGAGTTT AAACCAAAAA ACACAGGAGA
AGATATAGGC TTTGTCTGGA CAAGAAAATC CTTGATATAT TTTGTTTGTG CCATAACAGG AGTGTCATTG GATTGGAGTA
TGAGCGCACT TCAATGCCAA GAAAATAATC TGAGGCCCCT AGTGAGAGAA AAGACAGTCC AAATTATGAA TAAGATGCTG
AACTAGGGAT GTGAAGTTTC CTGTTATTAC GATGCCATCA ATATAAACAA GTAATTGGAC AGTACAATTT TTGCTGAGAA
TATGTAAATA AGAATAGATC GCATTTTCCG TCTTTAAAAC CAAGCACACT TACCATCTCT GAAATCAAAT TGCAGTAAGA
TAGTTTTGTG AAGCTGACAA ACCAAAGAAG TATCTTTATC TTCAAAAACC TGGAGGTTTA GTCATGTAAA CCTCTTCATC
AAGAAAGACA TTGTTAACAT GTAACTGAAA CAAAGACCGC TTGTAAGCAA CAACAGAAAA TAGAATATTG CAAAAGGAGT
CAGGTTTTAT AACTGAAGAT AGACTCTCAT TAAAGTTGAA ACCATATTGT AAATTGAAAC CCCTGGCAAC TAATCCCATT
TGGGTTTCCC ATAACACAGA ACACCCGTTT ACAACCAATA GTATAAAAAT TAGGAGGAAG AGGAACTAAA GACTGGGTAT
TCTTCTATTC AAGAGCAAGA AGTTCATCTT GCATAGCACC AAACCACTTT GTATCCTGTA AGGCAATTTT GACACTCTTT
GGTTCTACAT TGGCAACAAG GAGAGATGGA ATAACCCTGA TTTGAACGAT ACCAGACTTA GAGTGAGTCT GCATAGAGTG
AGTATTGAGA GGACAACGTG GTACGATGTG TTTGGTACGG TTCAGAATTA GAAGTTAGGA TCTATGGAAA ACACAGGATA
AAAAAGGATA GATTTAGCAG AAGCTAAGAA AGAGTATCAA CTAGCTATGA ATAACATATT GAAACCGACA AGTATTATGA
TTAGTGAAAA TTACAAAAGT GAGTGAACTG CTTACCGAGG CCCGTGTATA TGGACAAAGG AGTATTGCAT AATGCATGCT
TGTTCAGTAG TACTAGGAAC TAACTACAAC TGTTACTACA ATAAATACAT ATAGTTGTTC AGAAACTATT AACCAAAAAG
AAACAAACTA GATATTACAA AAAAGGAGAA AAGTATATCT CCAACAAAGT CTTTACGAAT CCATTTCTTT TCACAAATGA
CTTTACTCTT ACTTTCTTCT GATATGCAGT CTCAAAAGGA CAATTATGAC AAGTACCACA ACACAGCCCA TGGTCGCATC
AGAATCTGGT TCGGAATACG ACAAATCATG AACTCTACTC CTCGCTTGCT TATCGAAACA AGAGATGCTG CAACACAACT
AAAAACTGGA ATACACATGG TACCCACTCC TTTTCTTTTC TACAAACATT TTGCGGAAAA ACAAGAACAA CATAACCAAA
ACTTCATTCT CTAACTTTAG ATCGAGTTGG GTGGGGCTGT TTTCATCAAC AATATTAATT TGATTATTCA AAATGGCCTA
TATAATAATG GGAGGAGTTC TAAATCAATA CCACTTATTT TTTATTCATA CTAGAAAGTG GTGTATTAAA CTAGCCAGCA
CAATACTTAT GCGCCAATGT CCTCACCTGA CATACAAAAC TGTTAGCATG TTGCAGAGAT ACCGTATGAG AACCAACTAG
TCAGGGATGT TCACAAAGTA GATCACGGAA CTGTTACATA CTTGGACAAG ATAGATTTCC TTCAAAGCAA TCTGCTAGCA
GCTCACTCAG TTTGGCTTGA TAATAACGAG GTAAATTTTT GCCCCTTTAA ACATGATTAT ACCCTTTCAA CAAAACCTAA
TTCAGTTCTT AAGTTTCTAT TATTATCTAA CATGTGGTGA GTTCAATTTT GGGTGATGCT GGTATGCAAG AAAACACCCA
TGACTGTTTA TTCCTCGAGT TAGTGTGATA AACAGTAATT ATTCCTGCAT AATATTTTTT CAGATATCTC TTCTTTCAAG
ATCAGGGGTC AAAGTGTCCC ACTGTCCTGC TGCTGCAATG CGAATGCTTG GATTTGCACC TGTAAGGGAG ATGCTTGATG
CTGGCGTTTG TGTCTCTCTG GGAACTGATG GGGCCCCATC AAACAATCGC ATGAGCATCG GTTCATCTGA ACTCTAAACT
TTTGAATTCT TTTTTACTTG CTTTATAATT GCACTAGATT CAACAATTCC GCATTTAATA GACCACAGAA GGAAGTATGC
AAATTTAATT GCACAAGATT CAACAAGCTC AAGTATGCAA ATTCAATTTG TTATGTGAAG AATTTGTATT TACTTATGTG
AAGAACTTTT ATTTTCAATA TAGTATTAAA TAGACCACAG AAGCAACCTA CCCTCCTAAG GCAGGGCAGG TTCATCTAAG
ATTATGAACA CCAAACCCTC ACCTGAACGT GAAATAGTGG GAGTCTCTAG CCGCATGGAA AATGTACACT TTGAGTGGAT
TGAAATTTTC ATTTCTAAAT TGTATTTGCA GTTGATGAAA TGTACCTAGC TTCTCTAATT AATAAAGGAC GGGAAGTTTA
TGCTAATGGA ACCACAGATC CAACAGCATT GCCCGCTGAA ACTATTCTTA GAATGGTTAC AGTTAATGGT GCAAAGTCGG
TATTGTGGGA TGACGAACTA GGTTCTCTTG AGGTTGGGAA AAAGGTTGGT ATTGGTTCAC GTCATTCGTA AAGTGTAATT
ATTATGATTT TTTCTTCCCC GGCTAACTTT TTTCTTTTTG TTGAAATCTT CCCCTTTTAA TTGGGACTAA ATGCGGGATT
CTCTTTTGTT GGACACAGAT TATACTGTAG ACCTTTGAAT TCGAAGTAGA GAGTTGTGGT GTGGGGATAG TTCTTTGTAT
TTGCATAAAG CACAGTTGAA ACATGACATT TTTTATATCT GTTGATAATT ACCACATTTC GTTTTTGCAA ACTAGTTAAC
AATGAAAATA AATAGGAAAT TTTTAAAATA TCATATGGAC TAAGGTGAAA AAGAAAACAA CGTAAGGAAA GAAAATATAA
AAATCTTGCG GGAAACTTAT TACATTCAAT TGGACAAATG TTATATTGAC CTCCCTGGTC AATGCTTCTG CAATATCTTT
CTAACTTTGT TTAACACCAA ATCTTCTGTT GATGGTAAAG TAGATTATTT GCTAGAGAAA TAATACCTGG AGTCGCCAGA
TGTTAATAGA CATCTAGTGA AAGAATGAAA AAAGAGAAAA ATATCGAAAT TATGGGTGGT ATGATGTGAT AAGGGAAGAA
AAAAATGATT ATTATTGAGT GTTTAATATC ATTCCTCTTT TTTATATTTT CTTGATGGGA CCGAAGCTGA CAGTTTTGTG
ATTGTCATTC AATAGGCGGA CATTGTTGTA GTCAATCCTT CCTCTTGGCC TATGGTTCCT GTTCATGACT GGTACGAACC
CATTACATAA TTGGTACTTC TGTTAATTAT ACAGACCTTT TATTGAATTC TTTTGAATTA GCTGACCGGT GTTTGGATTA
GTTTTATCAG AAGCAATCAA TTTTTTTTTA TGACGAAGGC GAGGTAATAA ATAATTCTAC TTTTCATGAT TTCATCGCGT
GGGATAGAAT TGATTCTCGT GTGTTATCTG CACATCCTAG ATTGTGATCT TGTGCGCTTA TGAAATAATG TGATGATCAT
GCATTACATA AAACCATTGT AACGCCATGC AGCGAAAGTT CCTTTCTGTT GCAATCTTGG CTGGCTACTA TCACACCATT
CAAAGACCTT TTCAAGTTAA TACATTTACT GTTTACACAA TGTGCAGCAT TTCCAGCATA GTGTATTCCA TGCGATCAGA
AAATGTGATA TCTGTCATGT GCAATGGCGT GTGGATAATG AAGAACAAGA AGATTATACA CGTGGACGAG GTATTATCTT
GGATAGTTTT TCTTATGTAG AATGTGAATC GATTCTATAT TAGATTGAGA ATCCATTCAA TAATATTAAT TGACTTAATG
AACTAACACT TTACTTGAAG AAGGAAAGAA AGAAAATAGA ATGAAAAAAA AAAGATAAAT GGAAAATGAA AAATTAAAAC
TCCATTCATC TGGGTGAGTG AAAAATGGAT AAATATACAA AAATCATTTT AATTAATTAA AACCAAATTT AATTTATTAT
AAATCTAATC ATTTTTAACA TATAATTGCT CTTGATTTTT TTTTTTATGT TTTAAAGAAT TGTTTTATTC TTTTTAAAGA
AACTATAAAA CATAAGAAAG GCTTCCGCTA TCTCCTACTT TGCATGCCTT GAGATAAGTA TTTCTTACAA CTCCTTTTCC
TTTACTTTCT TCTTGAACTT GACAAACGTA CAAAAAAAAA ACATATAGAG TTCTTATCAA TTATGTTTCA ATTGGCCTAG
TGTTTCGTCT TTTTTCATTA CTCGTGGCCG GAGAAGTTTA ATTTGTATTG TCCATGATGA CAGGAAGAAG TTATTTTGAA
GGCAAAAGAG GCTTCTGTTG AACTTCTGAA GAGGGCAGGC ATAACATTAC CAAGCAGAAT GAACATGATT TGAGTATTTG
TTTTCAAGTG TATACAGATT GCTAATGCAA TACAGGAAAT AATGTATGCA CTATAGAGAC AGTACAGTAT CCAATGAATT
TAATTGTGTG GATGATGATA TTACAGAGTG AGCGTATGAC TGCATGACTC TGTAAATTGG TCAAGGGAGA GATTGAATAT
TTGAATATTC TTTAGTTTTT CAATTATCTT TTAACTATTA GTTGTCAAAA TCTAAACAT

>Vigan.08G001200.01
ATTAGATAAC CCCCCGCCTT GACTTTGAAG ATACTGATTC AAGAAGAAAA AGTATAAAAT AAGTATACAT TTGTAGAGTA
AAGTAACCAA GAGAGGAGAA AGGGGCGGTG GAGATGGAGA GAGAGAGGGA GGTGGTGAGT GTGCTGCACG GTGGTATGAT
CATAACCATG GACGAGGAGC AGCGAGTGTT TAGGGACGGG GGAATCGTGA TCGAAGGAGA TAGAATCAAA GCTATTGGAC
AATCTGCACA AATTCTTGCT GAATTTTCTG ATGTGGCCCA CCACATCCTC GATCTCACCG GCCACATCTT ACTCCCTGGA
TTTATTAACA CCCACGTCCA TAGTTCCCAA CAACTCGCTA GAGGCATAGC CGATGATGTG GACTTGATGA CCTGGTTGCA
TCACCGCATC TGGCCCTACG AATCCAACAT GACCCAACAC GATTCTTACC TCTCTACTTT GCTTTGCGGG ATCGAGCTCA
TTCACTCCGG CGTAACCTGT TTTGCTGAAG CTGGGGGTCA ACATGTGTCT GAAATGGCTA GAGCAGTCAG TTTACTGGGT
CTGCGAGCTT GTTTAACCCA GTCCACCATG GACTCTGGCC ACGGTTTGCC TCCATCCTGG GCCACTCGTA CCACGGATCA
ATGCATTCAG TCTCAAAAGG ACAATTATGA CAAGTACCAC AACACAGCCC ATGGTCGCAT CAGAATCTGG TTCGGAATAC
GACAAATCAT GAACTCTACT CCTCGCTTGC TTATCGAAAC AAGAGATGCT GCAACACAAC TAAAAACTGG AATACACATG
CATGTTGCAG AGATACCGTA TGAGAACCAA CTAGTCAGGG ATGTTCACAA AGTAGATCAC GGAACTGTTA CATACTTGGA
CAAGATAGAT TTCCTTCAAA GCAATCTGCT AGCAGCTCAC TCAGTTTGGC TTGATAATAA CGAGATATCT CTTCTTTCAA
GATCAGGGGT CAAAGTGTCC CACTGTCCTG CTGCTGCAAT GCGAATGCTT GGATTTGCAC CTGTAAGGGA GATGCTTGAT
GCTGGCGTTT GTGTCTCTCT GGGAACTGAT GGGGCCCCAT CAAACAATCG CATGAGCATC GTTGATGAAA TGTACCTAGC
TTCTCTAATT AATAAAGGAC GGGAAGTTTA TGCTAATGGA ACCACAGATC CAACAGCATT GCCCGCTGAA ACTATTCTTA
GAATGGTTAC AGTTAATGGT GCAAAGTCGG TATTGTGGGA TGACGAACTA GGTTCTCTTG AGGTTGGGAA AAAGGCGGAC
ATTGTTGTAG TCAATCCTTC CTCTTGGCCT ATGGTTCCTG TTCATGACTG CATTTCCAGC ATAGTGTATT CCATGCGATC
AGAAAATGTG ATATCTGTCA TGTGCAATGG CGTGTGGATA ATGAAGAACA AGAAGATTAT ACACGTGGAC GAGGAAGAAG
TTATTTTGAA GGCAAAAGAG GCTTCTGTTG AACTTCTGAA GAGGGCAGGC ATAACATTAC CAAGCAGAAT GAACATGATT
TGAGTATTTG TTTTCAAGTG TATACAGATT GCTAATGCAA TACAGGAAAT AATGTATGCA CTATAGAGAC AGTACAGTAT
CCAATGAATT TAATTGTGTG GATGATGATA TTACAGAGTG AGCGTATGAC TGCATGACTC TGTAAATTGG TCAAGGGAGA
GATTGAATAT TTGAATATTC TTTAGTTTTT CAATTATCTT TTAACTATTA GTTGTCAAAA TCTAAACAT

>Vigan.08G001200.01
ATGGAGAGAG AGAGGGAGGT GGTGAGTGTG CTGCACGGTG GTATGATCAT AACCATGGAC GAGGAGCAGC GAGTGTTTAG
GGACGGGGGA ATCGTGATCG AAGGAGATAG AATCAAAGCT ATTGGACAAT CTGCACAAAT TCTTGCTGAA TTTTCTGATG
TGGCCCACCA CATCCTCGAT CTCACCGGCC ACATCTTACT CCCTGGATTT ATTAACACCC ACGTCCATAG TTCCCAACAA
CTCGCTAGAG GCATAGCCGA TGATGTGGAC TTGATGACCT GGTTGCATCA CCGCATCTGG CCCTACGAAT CCAACATGAC
CCAACACGAT TCTTACCTCT CTACTTTGCT TTGCGGGATC GAGCTCATTC ACTCCGGCGT AACCTGTTTT GCTGAAGCTG
GGGGTCAACA TGTGTCTGAA ATGGCTAGAG CAGTCAGTTT ACTGGGTCTG CGAGCTTGTT TAACCCAGTC CACCATGGAC
TCTGGCCACG GTTTGCCTCC ATCCTGGGCC ACTCGTACCA CGGATCAATG CATTCAGTCT CAAAAGGACA ATTATGACAA
GTACCACAAC ACAGCCCATG GTCGCATCAG AATCTGGTTC GGAATACGAC AAATCATGAA CTCTACTCCT CGCTTGCTTA
TCGAAACAAG AGATGCTGCA ACACAACTAA AAACTGGAAT ACACATGCAT GTTGCAGAGA TACCGTATGA GAACCAACTA
GTCAGGGATG TTCACAAAGT AGATCACGGA ACTGTTACAT ACTTGGACAA GATAGATTTC CTTCAAAGCA ATCTGCTAGC
AGCTCACTCA GTTTGGCTTG ATAATAACGA GATATCTCTT CTTTCAAGAT CAGGGGTCAA AGTGTCCCAC TGTCCTGCTG
CTGCAATGCG AATGCTTGGA TTTGCACCTG TAAGGGAGAT GCTTGATGCT GGCGTTTGTG TCTCTCTGGG AACTGATGGG
GCCCCATCAA ACAATCGCAT GAGCATCGTT GATGAAATGT ACCTAGCTTC TCTAATTAAT AAAGGACGGG AAGTTTATGC
TAATGGAACC ACAGATCCAA CAGCATTGCC CGCTGAAACT ATTCTTAGAA TGGTTACAGT TAATGGTGCA AAGTCGGTAT
TGTGGGATGA CGAACTAGGT TCTCTTGAGG TTGGGAAAAA GGCGGACATT GTTGTAGTCA ATCCTTCCTC TTGGCCTATG
GTTCCTGTTC ATGACTGCAT TTCCAGCATA GTGTATTCCA TGCGATCAGA AAATGTGATA TCTGTCATGT GCAATGGCGT
GTGGATAATG AAGAACAAGA AGATTATACA CGTGGACGAG GAAGAAGTTA TTTTGAAGGC AAAAGAGGCT TCTGTTGAAC
TTCTGAAGAG GGCAGGCATA ACATTACCAA GCAGAATGAA CATGATTTGA 

>Vigan.08G001200.01
MEREREVVSV LHGGMIITMD EEQRVFRDGG IVIEGDRIKA IGQSAQILAE FSDVAHHILD LTGHILLPGF INTHVHSSQQ
LARGIADDVD LMTWLHHRIW PYESNMTQHD SYLSTLLCGI ELIHSGVTCF AEAGGQHVSE MARAVSLLGL RACLTQSTMD
SGHGLPPSWA TRTTDQCIQS QKDNYDKYHN TAHGRIRIWF GIRQIMNSTP RLLIETRDAA TQLKTGIHMH VAEIPYENQL
VRDVHKVDHG TVTYLDKIDF LQSNLLAAHS VWLDNNEISL LSRSGVKVSH CPAAAMRMLG FAPVREMLDA GVCVSLGTDG
APSNNRMSIV DEMYLASLIN KGREVYANGT TDPTALPAET ILRMVTVNGA KSVLWDDELG SLEVGKKADI VVVNPSSWPM
VPVHDCISSI VYSMRSENVI SVMCNGVWIM KNKKIIHVDE EEVILKAKEA SVELLKRAGI TLPSRMNMI*