GBrowse Details

Vigan.07G230200.01

Basic Information:
Name: Vigan.07G230200.01
Multiple alignment
Variant Information
Position: Chr07:31263971..31266675 (+ strand)
Length: 2705
Functional Information:
Description: Similar to F17A17.37 protein. [XP_007052493.1, Theobroma cacao]
InterPro: Protein of unknown function DUF642 (IPR006946)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.73,9.42,49.18,8.64,34.52,88.92,122 .17,69.01
Arabidopsis thaliana homolog: AT3G08030.1
Automatic updates:
Name: NM_001254346 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100796094 (LOC100796094), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001254346 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100796094 (LOC100796094), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:31263971..31264238 (+ strand)
Length: 268
Type: five_prime_UTR
Position: Chr07:31264239..31264326 (+ strand)
Length: 88
Type: CDS
Position: Chr07:31264752..31265246 (+ strand)
Length: 495
Type: CDS
Position: Chr07:31265821..31266341 (+ strand)
Length: 521
Type: CDS
Position: Chr07:31266342..31266675 (+ strand)
Length: 334
Type: three_prime_UTR

>Vigan.07G230200.01 class=Sequence position=Chr07:31263971..31266675 (+ strand)
TCTCAATTCA AAGGTGTCCA TAGCATGAAT CGTGGAGAAA AAAGCGGGTG GTGAAAAAAA AAATCAAAAC TTTAAAGACA
AATCATGTGT GTTCCCCCCC TAATGCACTT TTCTACGTGA TTTTTGCTAA GTACCTTCCA TTTTCTCTTT CCATTATAAA
AACAAACGAA GCTTCATCCA CTTCACTTCC ACACCAAGTT CTGCTCTTTC AGAGCAACGC GCAAACCCTG TTCTCTTCTC
TTCTTCTAGC CTCTGTTTTG CACTGAAAAT GGCACAGATT CTTTCTTCAG CACTGCTTTT GGCTCTGCTG TGTGCTGCTT
CAGCTGTTTC TGCCATTGAG CCAAGAGTAC CAGAAGGTAT TTTGCTGACA TCTGAGACCC TTTCGTTTGC ATACATTGTA
ATGTGAAAAG AAAACACAAA AAACACTTGA TCTGTTTCTT GTTTAACTTG AGGTTTATGT TCATTTTGTC TGTGTTTACT
TCAAACCCTT GTTCTGCATT GTCCACTTTT ACTCTGATTT GCTTGATGGA ATGCCTCTAT GGGTTACTTG CTTGAACGTT
TTTTCAGGGT AGCCTTTAGA TCCGTTCGAT ATCTTGAGAT TTAGCTCCTT TGAGAAACTG TCTGTAGCAA AAACACAAAG
TTTATGAAAT GTTTTGATTC AAGTGATAAG TGAATATAAC ATCTCATCAC TGTCTCTTTT AAACACATGG ATCTGGCAAT
GTGCAGCACC TGATTCTGAA GTTGTGTTTT TTTTTTCTCT TTGTAATTTT TAACTTCATA GCTTACCTTC AAAATGGCAA
CTTTGAGGAG CAGCCGAACC CCAAATATCT CCAGAAAACA AAGCTCGTTG GGAAATTTGC TTTGCCCAAA TGGGAGATCA
ATGGTCTGGT TGAGTATGTC TCTGGGGGAC CCCAACCTGG TGGCATGTTC TTCCCAGTTA CTCATGGAAT TCATGCTGTG
AGACTTGGCA ATGAGGCTTC AATCTCCCAA ACTATCAAGG TCAAACAGGG TCAACTGTAT GCTCTAATTC TTGGGGCCTC
AAGGACTTGT GCACAAGATG AAGTTTTGAG AATCTCTGTG CCTCCACAGA CTGGTGATGT TCCTTTGCAG ACCCTGTATA
GCCTCAACGG TGATGTTATT GCTTGGGGGT TTAAGGCCAC TTCTAATGTT GTCAAAGTGA CTTTCCACAA CCCTGGAGTT
CAAGAAGATC CAGCTTGTGG GCCACTTCTG GATGCCATTG CTATCAGGGA GTTCTACCCT CCAATGCCTA CTAGAGGTAA
TGAAACATAG ACCATGCTAT TCTACCCTAC TCTTGGAACC TAACATCTTA ATTTTATCAA GTACCACTTG GGTATGTTAT
GGGAATCTTT GTTGGCTCTG AATAGATGGT ACAGTTTCAA ATCTATATGC AACATTGATC TTTCTGCGGT TTTTAACACA
TCAGAAAGTT GTAGGAAACC GTTTGCTGAG TTTCCGGGTG ATTAGTACCT CCATGCTCTT TGGTCTCGCA CGATGCCATC
ATATTTTCAG TGTGTCCCTA CTTGGTCATA TTTTGTCAAA AATGAATACT TAGTCACATT TATATAACAT AAAAGTTGGA
TCTTTACCTT AGCCAGGCAC ATGGGTGGAG CCTGATAGCA CATTAGAAAC AAAGTTTTTT CCATTACCTT TTCTTTATCT
TTTGTGGTAA CAAAGAGAGA GAAACTCAAT TTACAAAAAG TGGGTGTGAA AATGTAATTA CTGTTATTTT GATGCGGAAT
ATGAACTATC TGATTTTACT AAGCCTCATA TGAGAATGTG TACCGTAGAA GTGGCACTTT CTGATAAAAC CATTATATGG
TATCTTGCAG TTAACTTGGT AAAAAATCCT GGCTTTGAGG AGGGTCCATT CCCCATTTTC AACTCTACAA ACGGTGTTCT
GCTCCCTCCT CAACAACAAG ATAGGTTCTC CCCACTACCT GGTTGGATCA TTGAGTCCCT CAAGGCTGTG AAGTTCATTG
ACTCAAAGCA TTTCAATATC CCATTTGGGC TTGGAGCAGT GGAGCTTGTG GCAGGCAGAG AAAGTGCCAT TGCACAAGTC
ATCAGAACAG TTACAAACAA AGTCTACAAC ATCACATTTT CAATTGGAGA TGCCAAAAAT GGGTGCCATG GATCCATGAT
GGTTGAAGCA TTTGCTGCTA AAGATACCTT CAAAGTTCCC TTCAAATCTG AAGGGAAGGG AACATTCAGG ACTGTGAGTT
TCAAGTTCAA AGCTATTGCA CCGAGAACCA GACTCACTTT CTACAGCTCC TTTTATCATA CCAGAATTGA TGATTATGGT
TCTCTTTGTG GCCCTGTTAT TGATCAAGTT ATAGTGTTCC CTGTTGCCTA AACATGAGTT CCTTCTACTT TACCTTTACT
AAAATATGTA GTAATTGAGA GATTTTTGCT ATCCCTTGAG TCTGTATTTT CTATAATTGC AAGAAGGATG AAAGATATTC
TCAACTGTTG TTTGGTCTTG TAAATTTCTA TTCTCCTTTT ACAGGGATGC ATACCACCAA TTCGAGAGAT CAGTTTTAAT
GTATTTTTAA TTTTTCATCG TAAAATATGG TTGAAATCAT TAGTAAGATG ATATTAAACA AGTTCAATTT ACAAGATCTA
ATGAAGTATA TGTATGGAAG GAATCTAATC TAGTGCTGTG TTTGCTTGTG GGTGTGTTCC TGTTG

>Vigan.07G230200.01
TCTCAATTCA AAGGTGTCCA TAGCATGAAT CGTGGAGAAA AAAGCGGGTG GTGAAAAAAA AAATCAAAAC TTTAAAGACA
AATCATGTGT GTTCCCCCCC TAATGCACTT TTCTACGTGA TTTTTGCTAA GTACCTTCCA TTTTCTCTTT CCATTATAAA
AACAAACGAA GCTTCATCCA CTTCACTTCC ACACCAAGTT CTGCTCTTTC AGAGCAACGC GCAAACCCTG TTCTCTTCTC
TTCTTCTAGC CTCTGTTTTG CACTGAAAAT GGCACAGATT CTTTCTTCAG CACTGCTTTT GGCTCTGCTG TGTGCTGCTT
CAGCTGTTTC TGCCATTGAG CCAAGAGTAC CAGAAGCTTA CCTTCAAAAT GGCAACTTTG AGGAGCAGCC GAACCCCAAA
TATCTCCAGA AAACAAAGCT CGTTGGGAAA TTTGCTTTGC CCAAATGGGA GATCAATGGT CTGGTTGAGT ATGTCTCTGG
GGGACCCCAA CCTGGTGGCA TGTTCTTCCC AGTTACTCAT GGAATTCATG CTGTGAGACT TGGCAATGAG GCTTCAATCT
CCCAAACTAT CAAGGTCAAA CAGGGTCAAC TGTATGCTCT AATTCTTGGG GCCTCAAGGA CTTGTGCACA AGATGAAGTT
TTGAGAATCT CTGTGCCTCC ACAGACTGGT GATGTTCCTT TGCAGACCCT GTATAGCCTC AACGGTGATG TTATTGCTTG
GGGGTTTAAG GCCACTTCTA ATGTTGTCAA AGTGACTTTC CACAACCCTG GAGTTCAAGA AGATCCAGCT TGTGGGCCAC
TTCTGGATGC CATTGCTATC AGGGAGTTCT ACCCTCCAAT GCCTACTAGA GTTAACTTGG TAAAAAATCC TGGCTTTGAG
GAGGGTCCAT TCCCCATTTT CAACTCTACA AACGGTGTTC TGCTCCCTCC TCAACAACAA GATAGGTTCT CCCCACTACC
TGGTTGGATC ATTGAGTCCC TCAAGGCTGT GAAGTTCATT GACTCAAAGC ATTTCAATAT CCCATTTGGG CTTGGAGCAG
TGGAGCTTGT GGCAGGCAGA GAAAGTGCCA TTGCACAAGT CATCAGAACA GTTACAAACA AAGTCTACAA CATCACATTT
TCAATTGGAG ATGCCAAAAA TGGGTGCCAT GGATCCATGA TGGTTGAAGC ATTTGCTGCT AAAGATACCT TCAAAGTTCC
CTTCAAATCT GAAGGGAAGG GAACATTCAG GACTGTGAGT TTCAAGTTCA AAGCTATTGC ACCGAGAACC AGACTCACTT
TCTACAGCTC CTTTTATCAT ACCAGAATTG ATGATTATGG TTCTCTTTGT GGCCCTGTTA TTGATCAAGT TATAGTGTTC
CCTGTTGCCT AAACATGAGT TCCTTCTACT TTACCTTTAC TAAAATATGT AGTAATTGAG AGATTTTTGC TATCCCTTGA
GTCTGTATTT TCTATAATTG CAAGAAGGAT GAAAGATATT CTCAACTGTT GTTTGGTCTT GTAAATTTCT ATTCTCCTTT
TACAGGGATG CATACCACCA ATTCGAGAGA TCAGTTTTAA TGTATTTTTA ATTTTTCATC GTAAAATATG GTTGAAATCA
TTAGTAAGAT GATATTAAAC AAGTTCAATT TACAAGATCT AATGAAGTAT ATGTATGGAA GGAATCTAAT CTAGTGCTGT
GTTTGCTTGT GGGTGTGTTC CTGTTG

>Vigan.07G230200.01
ATGGCACAGA TTCTTTCTTC AGCACTGCTT TTGGCTCTGC TGTGTGCTGC TTCAGCTGTT TCTGCCATTG AGCCAAGAGT
ACCAGAAGCT TACCTTCAAA ATGGCAACTT TGAGGAGCAG CCGAACCCCA AATATCTCCA GAAAACAAAG CTCGTTGGGA
AATTTGCTTT GCCCAAATGG GAGATCAATG GTCTGGTTGA GTATGTCTCT GGGGGACCCC AACCTGGTGG CATGTTCTTC
CCAGTTACTC ATGGAATTCA TGCTGTGAGA CTTGGCAATG AGGCTTCAAT CTCCCAAACT ATCAAGGTCA AACAGGGTCA
ACTGTATGCT CTAATTCTTG GGGCCTCAAG GACTTGTGCA CAAGATGAAG TTTTGAGAAT CTCTGTGCCT CCACAGACTG
GTGATGTTCC TTTGCAGACC CTGTATAGCC TCAACGGTGA TGTTATTGCT TGGGGGTTTA AGGCCACTTC TAATGTTGTC
AAAGTGACTT TCCACAACCC TGGAGTTCAA GAAGATCCAG CTTGTGGGCC ACTTCTGGAT GCCATTGCTA TCAGGGAGTT
CTACCCTCCA ATGCCTACTA GAGTTAACTT GGTAAAAAAT CCTGGCTTTG AGGAGGGTCC ATTCCCCATT TTCAACTCTA
CAAACGGTGT TCTGCTCCCT CCTCAACAAC AAGATAGGTT CTCCCCACTA CCTGGTTGGA TCATTGAGTC CCTCAAGGCT
GTGAAGTTCA TTGACTCAAA GCATTTCAAT ATCCCATTTG GGCTTGGAGC AGTGGAGCTT GTGGCAGGCA GAGAAAGTGC
CATTGCACAA GTCATCAGAA CAGTTACAAA CAAAGTCTAC AACATCACAT TTTCAATTGG AGATGCCAAA AATGGGTGCC
ATGGATCCAT GATGGTTGAA GCATTTGCTG CTAAAGATAC CTTCAAAGTT CCCTTCAAAT CTGAAGGGAA GGGAACATTC
AGGACTGTGA GTTTCAAGTT CAAAGCTATT GCACCGAGAA CCAGACTCAC TTTCTACAGC TCCTTTTATC ATACCAGAAT
TGATGATTAT GGTTCTCTTT GTGGCCCTGT TATTGATCAA GTTATAGTGT TCCCTGTTGC CTAA

>Vigan.07G230200.01
MAQILSSALL LALLCAASAV SAIEPRVPEA YLQNGNFEEQ PNPKYLQKTK LVGKFALPKW EINGLVEYVS GGPQPGGMFF
PVTHGIHAVR LGNEASISQT IKVKQGQLYA LILGASRTCA QDEVLRISVP PQTGDVPLQT LYSLNGDVIA WGFKATSNVV
KVTFHNPGVQ EDPACGPLLD AIAIREFYPP MPTRVNLVKN PGFEEGPFPI FNSTNGVLLP PQQQDRFSPL PGWIIESLKA
VKFIDSKHFN IPFGLGAVEL VAGRESAIAQ VIRTVTNKVY NITFSIGDAK NGCHGSMMVE AFAAKDTFKV PFKSEGKGTF
RTVSFKFKAI APRTRLTFYS SFYHTRIDDY GSLCGPVIDQ VIVFPVA*