GBrowse Details

Vigan.07G220800.01

Basic Information:
Name: Vigan.07G220800.01
Multiple alignment
Variant Information
Position: Chr07:30079179..30081670 (+ strand)
Length: 2492
Functional Information:
Description: Similar to Uncharacterized protein. [C6TAT2, Glycine max]
GO: Molecular Function: protein binding (GO:0005515)
InterPro: Glutathione S-transferase, N-terminal (IPR004045)
Glutathione S-transferase, C-terminal (IPR004046)
Glutathione S-transferase, C-terminal-like (IPR010987)
Thioredoxin-like fold (IPR012336)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.10,0.09,0.00,122.28,0.36,26.1 7,0.24
Automatic updates:
Name: KM818453 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max tau class glutathione S-transferase (GSTU38) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:30079179..30079271 (+ strand)
Length: 93
Type: five_prime_UTR
Position: Chr07:30079272..30079583 (+ strand)
Length: 312
Type: CDS
Position: Chr07:30081141..30081482 (+ strand)
Length: 342
Type: CDS
Position: Chr07:30081483..30081670 (+ strand)
Length: 188
Type: three_prime_UTR

>Vigan.07G220800.01 class=Sequence position=Chr07:30079179..30081670 (+ strand)
GCAGAATTTT GACTGTAGGG CTATAAAAGA ACAACCTTTG CTCCTGTAAC CAACAGCAAA CAGCATAGTT CTTGCAGTTG
AGAAGTTGAA TCGATGGACG AGGTGGTTCT GTTGGATACA TGGGGAAGCA TGTTTGGGAT GAGGGCTTGG ATTGCATTGG
AAGAAAAGGG TGTTAAGTAT GAACGCAAGG AAGAGGATCT GAGCAAGAAG AGCCCTTTGC TTCTGCAGAT GAACCCTATT
CACAAGAAAA TTCCAGTTCT CATTCATAAT GGAAAACCCA TTTCTGAATC TGCAATAATA GTGCAGTACA TCGATGAGGT
CTGGAATCAC AACCCTCCAT TTATGCCCTC TGATCCTTAT GAGAGAGCTC AAGCCAGATT CTGGGTCGAT TACATTGATG
CAAAGGTATA TATATATATA TGTGCTTTAA TGTGTTGAAT GTATGTCATT TCTTTCTATG CCCGAACAAA TTTGGATGTT
TCTATTCAGA ATTTGAACAT TCATTTCCAC GTTCAACTCT GCATTAATTT GGATAATAGT TTCAAATTAG ATTTTCAGAA
TGATCTTAGC GTTGAGTCTA AGTTTCACGT TGGATAAAAA TGAGAAAATA AAGTATTATA TTGTATGGTT AGACTCAATG
GTGTTTATAT CTCCCCGATG AACCTCCTTC TTGACAGACC TAACAGTGAT ATCATGGCCG ATGATTTGTT TTGATGAAAA
AGACTACTTA TTATTGTGAT TGATTAAAAA TGCTTCCGCT TAGAACACTT GGATGTATTG GAACCCAACA CTTAGACGTC
GTAATTTCAA AAATGTATAT GTGATATAGA AGTGGATAGA TTGATTAGTT AGTATATAGG TTTGAAATAA AAATAATGTT
TTGTGATACC ACAATGCAAG AAGAAAGACT AATAGGACAA GTGATATGAT ATAATATAAG GAAAAAGATG AAATTAGTCA
AATAAAGTCA AATGTCCATG TACTATTTTT GTTGAAGTAA AGCACTTATG TTGGAAAATT TTTATTTTAA AAAAAACTTA
TAAAATTTCA ATTCAATCTA ATTTTTTGAA TAATTAGTCA AATGTGCTTT TGAAAATATA GTCATCTTTA AGTGAAGCAT
GATTTATTCT TGGATTTTAG CAAATAAGTC GTTTCTTGTA GGAGTCCATA TGATTATACA TAACTGATTT CTCTTATAAA
AATGCTTATA CATAAACTTT TTAAAAAAAA AACCTTTTTT ATATTTGTGA GAGGAAAATT AGAACTTTAT ATTTTATGTT
ATAATATATA TTTTCTAGAG AAATGATAGA CATAGATATT CATTTCATAT ATATTTATTA AATACTTATC TTTTTCTTTT
TTTCTTTTTT TCTTGTTATA TTATATATCT TATAAATCTA TCACTGTAAT CTTTTTAAGT GTTTATCATT AGTTTGTATT
ACATGAATAT TTTTCATATT TTAGTACTCA CAATAGGAAA AATATTTTGA CACACACCTA AATTTTTTAC ATTCATTTGA
AATTATCTTT TCTTACTTTT TATTCTCTTT TTTTCTTGAA AAAATATAAA ATTTTACACT TTTATGACTA TTTTATCCTT
GTATTATGTG TCAATAGGAA AAAAAATTCT TTGACACACT TATATTTTTT ACATTCATTT GACACTATCT TTTCTTACTT
TTTATCCTTT TCTTTCTTAA AAAAATACAA AATTTTACAT TTTTATGACT ATTTTACTCT TGTATTATGT GTCAATAGGA
AAAATGATTC TTTGACACAC CTAAACTTTT TACATTCATT TGATAGTATC TTTTCTTACT TTTTACCATC TTTTTTGAAA
AAATACAAAA CTTTATATTT TTATGACCAT TTTACCTTGT ATTCTGTGTC AAATGAATGT AAAAGTATGT CATGGTACTA
TTACTCCCCA CAATAACCAT GTGATATTCC CCATCCATGC AGGTGTATCC TACTTGGAAT AAAATGTGGC TTTCTGAAGG
AGAAGAACAC GAGGCAGGAA AAAAAGAGTT GATTTCTATC TTTAAGCAGC TGGAAGAGAC ATTGGGTGAC AAACCTTTTT
ATGGAAATGA GATGTTTGGC TTTGTTGATA TTGCTCTTAT CCCTTTCTAC AGTTGGTTTT ATACTTTTGA GACATATGGA
AACTTTGAAA TGGAAGCAGA GTGTCCTAAA CTTGTGGCTT GGGCTAAAAG ATGCATGCAG AGAGAGACTG TGTCCACGAT
TCTTCCTAAT GAGAAGGAAG TTTACAATGC AGTAGTGGAA ATGAAGAAGA ATATAGAAAC TTAATGTGTA CCTTTATGGT
ATTATTGTAT GCCTTTGTTT TGAGTTTGTT TAGCTTGTTT TTGAGTGTTT TACATAAGAT TGATTAAGTT GAGATATATA
TAGAGGAATT AAGGTGAGGC GTATATGAAT GTTGTTATAT TTTGTTTTAA ATTTGTGCAA TTATATTATC AATAAAATCT
CATTTATTAT GG

>Vigan.07G220800.01
GCAGAATTTT GACTGTAGGG CTATAAAAGA ACAACCTTTG CTCCTGTAAC CAACAGCAAA CAGCATAGTT CTTGCAGTTG
AGAAGTTGAA TCGATGGACG AGGTGGTTCT GTTGGATACA TGGGGAAGCA TGTTTGGGAT GAGGGCTTGG ATTGCATTGG
AAGAAAAGGG TGTTAAGTAT GAACGCAAGG AAGAGGATCT GAGCAAGAAG AGCCCTTTGC TTCTGCAGAT GAACCCTATT
CACAAGAAAA TTCCAGTTCT CATTCATAAT GGAAAACCCA TTTCTGAATC TGCAATAATA GTGCAGTACA TCGATGAGGT
CTGGAATCAC AACCCTCCAT TTATGCCCTC TGATCCTTAT GAGAGAGCTC AAGCCAGATT CTGGGTCGAT TACATTGATG
CAAAGGTGTA TCCTACTTGG AATAAAATGT GGCTTTCTGA AGGAGAAGAA CACGAGGCAG GAAAAAAAGA GTTGATTTCT
ATCTTTAAGC AGCTGGAAGA GACATTGGGT GACAAACCTT TTTATGGAAA TGAGATGTTT GGCTTTGTTG ATATTGCTCT
TATCCCTTTC TACAGTTGGT TTTATACTTT TGAGACATAT GGAAACTTTG AAATGGAAGC AGAGTGTCCT AAACTTGTGG
CTTGGGCTAA AAGATGCATG CAGAGAGAGA CTGTGTCCAC GATTCTTCCT AATGAGAAGG AAGTTTACAA TGCAGTAGTG
GAAATGAAGA AGAATATAGA AACTTAATGT GTACCTTTAT GGTATTATTG TATGCCTTTG TTTTGAGTTT GTTTAGCTTG
TTTTTGAGTG TTTTACATAA GATTGATTAA GTTGAGATAT ATATAGAGGA ATTAAGGTGA GGCGTATATG AATGTTGTTA
TATTTTGTTT TAAATTTGTG CAATTATATT ATCAATAAAA TCTCATTTAT TATGG

>Vigan.07G220800.01
ATGGACGAGG TGGTTCTGTT GGATACATGG GGAAGCATGT TTGGGATGAG GGCTTGGATT GCATTGGAAG AAAAGGGTGT
TAAGTATGAA CGCAAGGAAG AGGATCTGAG CAAGAAGAGC CCTTTGCTTC TGCAGATGAA CCCTATTCAC AAGAAAATTC
CAGTTCTCAT TCATAATGGA AAACCCATTT CTGAATCTGC AATAATAGTG CAGTACATCG ATGAGGTCTG GAATCACAAC
CCTCCATTTA TGCCCTCTGA TCCTTATGAG AGAGCTCAAG CCAGATTCTG GGTCGATTAC ATTGATGCAA AGGTGTATCC
TACTTGGAAT AAAATGTGGC TTTCTGAAGG AGAAGAACAC GAGGCAGGAA AAAAAGAGTT GATTTCTATC TTTAAGCAGC
TGGAAGAGAC ATTGGGTGAC AAACCTTTTT ATGGAAATGA GATGTTTGGC TTTGTTGATA TTGCTCTTAT CCCTTTCTAC
AGTTGGTTTT ATACTTTTGA GACATATGGA AACTTTGAAA TGGAAGCAGA GTGTCCTAAA CTTGTGGCTT GGGCTAAAAG
ATGCATGCAG AGAGAGACTG TGTCCACGAT TCTTCCTAAT GAGAAGGAAG TTTACAATGC AGTAGTGGAA ATGAAGAAGA
ATATAGAAAC TTAA

>Vigan.07G220800.01
MDEVVLLDTW GSMFGMRAWI ALEEKGVKYE RKEEDLSKKS PLLLQMNPIH KKIPVLIHNG KPISESAIIV QYIDEVWNHN
PPFMPSDPYE RAQARFWVDY IDAKVYPTWN KMWLSEGEEH EAGKKELISI FKQLEETLGD KPFYGNEMFG FVDIALIPFY
SWFYTFETYG NFEMEAECPK LVAWAKRCMQ RETVSTILPN EKEVYNAVVE MKKNIET*