GBrowse Details

Vigan.07G217500.01

Basic Information:
Name: Vigan.07G217500.01
Multiple alignment
Variant Information
Position: Chr07:29783224..29785961 (- strand)
Length: 2738
Functional Information:
Description: Similar to feruloyl CoA ortho-hydroxylase 1-like. [XP_004488807.1, Cicer arietinum]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: oxidoreductase activity (GO:0016491)
Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (GO:0016706)
InterPro: Oxoglutarate/iron-dependent dioxygenase (IPR005123)
Non-haem dioxygenase N-terminal domain (IPR026992)
Isopenicillin N synthase-like (IPR027443)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.45,0.00,0.05,0.00,0.06,1.62,268.45,0.00
Arabidopsis thaliana homolog: AT3G12900.1
Automatic updates:
Name: NM_001255509 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max 1-aminocyclopropane-1-carboxylate oxidase homolog 11-like (LOC100803722), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:29783224..29783535 (- strand)
Length: 312
Type: three_prime_UTR
Position: Chr07:29783536..29783781 (- strand)
Length: 246
Type: CDS
Position: Chr07:29784710..29785052 (- strand)
Length: 343
Type: CDS
Position: Chr07:29785397..29785896 (- strand)
Length: 500
Type: CDS
Position: Chr07:29785897..29785961 (- strand)
Length: 65
Type: five_prime_UTR

>Vigan.07G217500.01 class=Sequence position=Chr07:29783224..29785961 (- strand)
GATCATAGCA ATTTCTACTG AACTTTTGAT TTGCCAAAAC CATAGTCTAA AGCAAATTGC ACTGCATGGC TCTAAGATCC
AACTCCTCAA ATTCGCTGTA TGATTTTGTG GTGAGAGCCG GCAATGGTGT GAAAGGTTTG GTAGACTCTG GTGTGTCAGA
GGTGCCAGAG AGGTACATAC AACCTCCAGG CGAACGAATC AACAAGCATG ATTCAAGGGC ATGTGATGCT CCACCCATTG
ACTTGTCAAA ACTGAATGGA GAAGAGCATG AGAAAGTGGT GGATGAGATT GCTAGAGCAG CTGAAACTCT TGGTTTCTTT
CAGGTGGTGA ATCATGGGGT GCCTTTGGAG TTGCTGGAAT CGCTTAAAGA TGCAGCACAC ACATTCTTCA GTTTGCCACC
AGAAAAGAAA GCTGTTTATT GCACTGGGGT GAGCCCTAGC CCCAGGGTAA AATATGGGAC TAGCTTTGTG CCAGAGAAAG
AGAAGGCTTT GGAGTGGAAA GACTATATCA GTATGACATT TAACAGTGAT GAAGAAGCTC TTCAGTGTTG GCCTAATCAG
TGCAAGTATG ATTTTCCTTC TACTCTGTTA GATATATTAT ATATTTATTT TTATATCTTT AGTTAATTTT GATTATTTTT
TATTTGTATT TTCAACTTAC TACATATTTC TTTTATTATA AATAGATGAT TCTATGTGTG CATTTAATAA AAAAGTGAGA
TTAATTTCAG ATATAATTTT CAGTGTATTT AACTTGGTAT CAAAACTAAA TTACAATCTT TCTAACCATA TTTGTTGTTT
GTTGGATATG TTGTTCAATA GACCATTGTT GGATGACGCG CGCTCGATAC GATGTCTATT CATGTTCAGT TCTTAAACAT
TTCAACTATC TCTTCTCTCT TCTTTTTAGG GAAGTTGCAC TTGAGTATTT GAAGTTATCA ACTAAGATGG TTAGAGACAT
TGTGGAAGCG TTGATCGGTA AGCTCGGAGT TACACTAAAA GATTCAGAAA TGGAAGGCCT TCTTGGAATG AAGATGGTTA
ACATGAACTA CTATCCAGCG TGCCCAAATC CAGAGCTTAC AGTGGGTGTT GGGCGTCACT CTGATATGGG AGCTATCACA
GTACTGCTCC AAGATGGCAT TGGAGGCTTG TATGTCAAGG TGGACCAACA AAATCCTGCT GACAAAGGAC AGTGGTTGGA
AATTCCCCCA ATCCCTGGAG CTCTTGTAAT TAATATTGGC GATACTTTAC AGGTTTGATA CCCTAAAATC TCACAACTAA
CAACTCAAAA TTTTCAAATA ATCAAAATCC ACTTTAATAC TGGAGGGTAA TTTATAACAA AAATAACATT ATTATAACAC
TTTTACATAA CAGATTACAA AAATAAAATA GTTATAAAAG TATACATTTT TATATTTTTT CAAAAAGAAA AGAATAAAAA
GATAAAAAAA ATAATATCAA ATAAATATAA AAAATTTAAG CACGTGAAAG AATATTTTTT CGGATAACAA ATATTTCACT
CGTATTCACT TACTGTATAA GTGGGATTTC TTGGCTACTT ATATAATTTT TTTTATGGAT AAAGCAACTT CTGATTAGTT
AGTAGACAAG TATTACAGAC GGACTAAATT TTTCACTACT AATAGTAATT AGTAATAAGA TTAAATGTTT TTTACTTTCA
AATTGTTTTA AATAATTATA TTTTATTTTT AAATTAAATT ATAATGTATC TAATCTTTGT TTTTATAAAA GTCATACAAA
ATTTCATCCC AACAAACGGC ATGTTATGTG GTGTACACAT GTGTGACCAA TTTTACATTG AATCATAATA TAACATATAC
GATTTGTTTG GCATTTAATT CAAAATGAAA TATAATTTTT TATAATAATT TGAGGACAAA ATATTTATTT TAACTAATAG
TTAATTACAT AAACTAATGC AATTTAGTAA TTTTCTTTAA CCATGTCATT GGTACAACAT TAACCTGTTA TTCATAAATC
ATTAAAAAAT TTGAGTAATC AATCTCTCAT CCCATAGTAT ATTGAAACTT TATTTAAGAT AATAGAGTCC AGTATTAGTC
GGAAAAGCAA CCAGCATAGT AGTTTATGAT TAAAAAAAAA TACATGAGCA GTATATATAC TATTTTGTTG ATGTGCTTTG
TTTATGGTAA TTAATGTAAG ATACTGAGCA ATGGGAAGTA TAAGAGTGCT GAACACCGAG TAAGGACAAC TAGCAGCCAA
TCCAGGGTAT CGGTTCCGGT GTTTACAATG CCAATAGCTA CAGAAAGAAT AGGTCCATTG CCAGAGGTGG TGGAGAAAGA
TGGGTTGGCC CGCTACAGAG AAGTTGTGCT CCAGGATTAC ATGAACAATT TCTTTGGGAA TGCTCATGCT GGAAAAAACT
CTCTTGATTT TGCAAGGATC AACTAGTATA ATAATAAGTT GTAATTGATG AGATACGTCA TAATACGTTT TGCACTTATT
TACTACTTTG TCATCGTGTT AAATATTATG ACTGATGTCT ATATGTCATA ATAGATTTTT TTTTATTACA AAAATACTAT
CGGTCAACCT TTTATGATGG GTGGTTTTTA CCTGTCATAA TAAATTGTTA TAGAATGTTA CTTTTCTACT GGTGTGTGTT
TCCGTCTCCA TTTCTTGTTT CAGGAATAAA AAAGAGTATG TGTGGGTCCT TCTTCATTTC TTGTTTCAGC AATAAAACAT
TCCGTTATTT TCTATTAA

>Vigan.07G217500.01
GATCATAGCA ATTTCTACTG AACTTTTGAT TTGCCAAAAC CATAGTCTAA AGCAAATTGC ACTGCATGGC TCTAAGATCC
AACTCCTCAA ATTCGCTGTA TGATTTTGTG GTGAGAGCCG GCAATGGTGT GAAAGGTTTG GTAGACTCTG GTGTGTCAGA
GGTGCCAGAG AGGTACATAC AACCTCCAGG CGAACGAATC AACAAGCATG ATTCAAGGGC ATGTGATGCT CCACCCATTG
ACTTGTCAAA ACTGAATGGA GAAGAGCATG AGAAAGTGGT GGATGAGATT GCTAGAGCAG CTGAAACTCT TGGTTTCTTT
CAGGTGGTGA ATCATGGGGT GCCTTTGGAG TTGCTGGAAT CGCTTAAAGA TGCAGCACAC ACATTCTTCA GTTTGCCACC
AGAAAAGAAA GCTGTTTATT GCACTGGGGT GAGCCCTAGC CCCAGGGTAA AATATGGGAC TAGCTTTGTG CCAGAGAAAG
AGAAGGCTTT GGAGTGGAAA GACTATATCA GTATGACATT TAACAGTGAT GAAGAAGCTC TTCAGTGTTG GCCTAATCAG
TGCAAGGAAG TTGCACTTGA GTATTTGAAG TTATCAACTA AGATGGTTAG AGACATTGTG GAAGCGTTGA TCGGTAAGCT
CGGAGTTACA CTAAAAGATT CAGAAATGGA AGGCCTTCTT GGAATGAAGA TGGTTAACAT GAACTACTAT CCAGCGTGCC
CAAATCCAGA GCTTACAGTG GGTGTTGGGC GTCACTCTGA TATGGGAGCT ATCACAGTAC TGCTCCAAGA TGGCATTGGA
GGCTTGTATG TCAAGGTGGA CCAACAAAAT CCTGCTGACA AAGGACAGTG GTTGGAAATT CCCCCAATCC CTGGAGCTCT
TGTAATTAAT ATTGGCGATA CTTTACAGAT ACTGAGCAAT GGGAAGTATA AGAGTGCTGA ACACCGAGTA AGGACAACTA
GCAGCCAATC CAGGGTATCG GTTCCGGTGT TTACAATGCC AATAGCTACA GAAAGAATAG GTCCATTGCC AGAGGTGGTG
GAGAAAGATG GGTTGGCCCG CTACAGAGAA GTTGTGCTCC AGGATTACAT GAACAATTTC TTTGGGAATG CTCATGCTGG
AAAAAACTCT CTTGATTTTG CAAGGATCAA CTAGTATAAT AATAAGTTGT AATTGATGAG ATACGTCATA ATACGTTTTG
CACTTATTTA CTACTTTGTC ATCGTGTTAA ATATTATGAC TGATGTCTAT ATGTCATAAT AGATTTTTTT TTATTACAAA
AATACTATCG GTCAACCTTT TATGATGGGT GGTTTTTACC TGTCATAATA AATTGTTATA GAATGTTACT TTTCTACTGG
TGTGTGTTTC CGTCTCCATT TCTTGTTTCA GGAATAAAAA AGAGTATGTG TGGGTCCTTC TTCATTTCTT GTTTCAGCAA
TAAAACATTC CGTTATTTTC TATTAA

>Vigan.07G217500.01
ATGGCTCTAA GATCCAACTC CTCAAATTCG CTGTATGATT TTGTGGTGAG AGCCGGCAAT GGTGTGAAAG GTTTGGTAGA
CTCTGGTGTG TCAGAGGTGC CAGAGAGGTA CATACAACCT CCAGGCGAAC GAATCAACAA GCATGATTCA AGGGCATGTG
ATGCTCCACC CATTGACTTG TCAAAACTGA ATGGAGAAGA GCATGAGAAA GTGGTGGATG AGATTGCTAG AGCAGCTGAA
ACTCTTGGTT TCTTTCAGGT GGTGAATCAT GGGGTGCCTT TGGAGTTGCT GGAATCGCTT AAAGATGCAG CACACACATT
CTTCAGTTTG CCACCAGAAA AGAAAGCTGT TTATTGCACT GGGGTGAGCC CTAGCCCCAG GGTAAAATAT GGGACTAGCT
TTGTGCCAGA GAAAGAGAAG GCTTTGGAGT GGAAAGACTA TATCAGTATG ACATTTAACA GTGATGAAGA AGCTCTTCAG
TGTTGGCCTA ATCAGTGCAA GGAAGTTGCA CTTGAGTATT TGAAGTTATC AACTAAGATG GTTAGAGACA TTGTGGAAGC
GTTGATCGGT AAGCTCGGAG TTACACTAAA AGATTCAGAA ATGGAAGGCC TTCTTGGAAT GAAGATGGTT AACATGAACT
ACTATCCAGC GTGCCCAAAT CCAGAGCTTA CAGTGGGTGT TGGGCGTCAC TCTGATATGG GAGCTATCAC AGTACTGCTC
CAAGATGGCA TTGGAGGCTT GTATGTCAAG GTGGACCAAC AAAATCCTGC TGACAAAGGA CAGTGGTTGG AAATTCCCCC
AATCCCTGGA GCTCTTGTAA TTAATATTGG CGATACTTTA CAGATACTGA GCAATGGGAA GTATAAGAGT GCTGAACACC
GAGTAAGGAC AACTAGCAGC CAATCCAGGG TATCGGTTCC GGTGTTTACA ATGCCAATAG CTACAGAAAG AATAGGTCCA
TTGCCAGAGG TGGTGGAGAA AGATGGGTTG GCCCGCTACA GAGAAGTTGT GCTCCAGGAT TACATGAACA ATTTCTTTGG
GAATGCTCAT GCTGGAAAAA ACTCTCTTGA TTTTGCAAGG ATCAACTAG

>Vigan.07G217500.01
MALRSNSSNS LYDFVVRAGN GVKGLVDSGV SEVPERYIQP PGERINKHDS RACDAPPIDL SKLNGEEHEK VVDEIARAAE
TLGFFQVVNH GVPLELLESL KDAAHTFFSL PPEKKAVYCT GVSPSPRVKY GTSFVPEKEK ALEWKDYISM TFNSDEEALQ
CWPNQCKEVA LEYLKLSTKM VRDIVEALIG KLGVTLKDSE MEGLLGMKMV NMNYYPACPN PELTVGVGRH SDMGAITVLL
QDGIGGLYVK VDQQNPADKG QWLEIPPIPG ALVINIGDTL QILSNGKYKS AEHRVRTTSS QSRVSVPVFT MPIATERIGP
LPEVVEKDGL ARYREVVLQD YMNNFFGNAH AGKNSLDFAR IN*