GBrowse Details

Vigan.07G187600.01

Basic Information:
Name: Vigan.07G187600.01
Multiple alignment
Variant Information
Position: Chr07:25940018..25946814 (+ strand)
Length: 6797
Functional Information:
Description: Similar to Uncharacterized protein. [K7LPX9, Glycine max]
GO: Biological Process: regulation of transcription, DNA-dependent (GO:0006355)
Cellular Component: nucleus (GO:0005634)
Molecular Function: DNA binding (GO:0003677)
Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700)
Molecular Function: protein dimerization activity (GO:0046983)
InterPro: Transcription factor, MADS-box (IPR002100)
Transcription factor, K-box (IPR002487)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.14,0.51,0.24,0.00,0.00,3.93,0.08,0 .02
Arabidopsis thaliana homolog: AT5G13790.1
Structure :
Position: Chr07:25940018..25940343 (+ strand)
Length: 326
Type: five_prime_UTR
Position: Chr07:25940344..25940525 (+ strand)
Length: 182
Type: CDS
Position: Chr07:25942849..25942927 (+ strand)
Length: 79
Type: CDS
Position: Chr07:25944649..25944713 (+ strand)
Length: 65
Type: CDS
Position: Chr07:25944811..25944910 (+ strand)
Length: 100
Type: CDS
Position: Chr07:25945045..25945086 (+ strand)
Length: 42
Type: CDS
Position: Chr07:25945797..25945838 (+ strand)
Length: 42
Type: CDS
Position: Chr07:25945937..25946103 (+ strand)
Length: 167
Type: CDS
Position: Chr07:25946619..25946673 (+ strand)
Length: 55
Type: CDS
Position: Chr07:25946674..25946814 (+ strand)
Length: 141
Type: three_prime_UTR

>Vigan.07G187600.01 class=Sequence position=Chr07:25940018..25946814 (+ strand)
GAGTAAGTGA AATGTTAAGA AAAAGAAAAA AAAATAGAAA TGGGACCCAC AACAGGTGCA GAGGAAAATC CAAAACAGGG
CAAAAAGGAA ACAGAAACAG TCTCTAAATG CACAGAGAAC AACACGGAGC CATGCAAAGT TGCCGTTTCC AGCAAGGCCA
ACCTCTCTGT TCAGTCGTTT GAGGTAAAAC GCTTTTCAGT GTCTTCACGA AGCCACCTTT TCTTCTTCTC TTCTCCTCTC
TTCGACCAAC TCAACAGGGT CTTTTTCTTT TCAACCTCAA ACTCTGTCTT TATAATCTCT GCTCGAGTTT GAGTTGGGCA
TGTCCAATGG GTCGAGGGAA GATCGAGATC AAAAGAATCG ACAATGCCAG CAGCAGGCAA GTCACCTTCT CCAAGCGCAG
AACAGGCTTG TTCAAAAAGG CTCAAGAACT CTCCATTCTC TGTGACTCCG AGGTTGCCGT CATAGTTTTT TCCAACACTG
GCAAGCTCTT TGAGTTTTCC AGTTCAGGGT GCGTCTCCTT CTCTTCAACA CCCTCTTGCA TGTCCTCTTA CTTTTCACTA
TACCCTTCTA CCCTCTCACT TTTTTTCTTC TATCTCTTTG TATCTACTCT AAAGAATTAA TCTTTTGTAA TGAGGAACAA
CTCCTGGTTG TAAAAATCGT GGCTTTCAAA AATTGTAGGT GATTTGATCA TGATGATGTT GTTGCAGGGA CAGGGACTTC
TGTTAACATT AGTGGTGTTG TTTGTAAATG GATTTCAGAT TTAAAGAAAA AAGAAAAGAA AATTAATTTG CTTTCTTTCC
TTGATGGTGT GTAATGTATG AAGATTATTC TGATTCAATT GGTTTTAAAT TTGGTGTGTA TGCAGATGAT TTTGATTTCA
ATTGTTTTAA ACTTGGTGTG ATAAGTACTT TTAAATATGG TGTATAATGT ATGAAAGTGA TTTTGATTCG ATTAGTTTTA
AGTTTGGTGT GACTGATAAA TTTAAGTGTG GTTGTGTATG AAGATGATTT TGGTTCTGTT GGTTTTGAAT TTGGTGTGAT
TGGTAAATTT TGCAGTTGAG GACTAAAATT TAGAGCCTTT AGACTTGTGT GTTTAAAACA TTTTTTGTGA GTGTATGATG
GTTTTGAAGT AATTATTCGT AAAAGGTTGA AAAATTCTCG GTTTGTGTGA TTCTATTGCT GCTAAAAATG TCTGTTGTTT
GAACTTCATT GGTGTTTGAA CTTCTATCCA CTGTTCAGCA CAGCTCTTGT GAAATAAAAT AATTCAGGGT CAGGGAACAG
TTCTGGGCAG CTCCATTATG GGTTTGACTG TTATTGTTCT CAGTTTTATG ATTTTGTTTT ATAAAAATAA TAAGCTAAAA
TTTTTAAAAT TGCTTTGTGT GTGGCTCAAT TTTAACATGT TTGTGAAGCT AATTTAATTA AAAATACTAA AATTTACTGT
TTATACAAGC TTTCAAAATT CAATTCTAGA ACTACTGTTC TGTCATGCAA GATATCTTTC TATGAAAGGC TTGATTCGAT
ATTGAAAAAT ATTATGAAAA AGAGAGAAAA TGAGTGATTT TATTTTGAAT ACTTATGTTG TTGAAAAGTT AATGTTAAAG
GAAGATTATA AAAGATTTAT ACAGTTAATA AGATAGCCTA TGGATAAATG GAAAGAGGAA AAGTAAAGTA AATGATTTGC
TTTGATGTAT CAGTTATCTG TCTTTGTATT ATTGTCTGTA TAATACAACT GTCATTAATG TTTTCCCCTG GTGAAATACA
AACTGCACTG ATAAGACTGT CATGTTTGTG AGGTTGGAGC TGAAAGAATC AAATCATAAG TGAGAATTTT AAATATATAG
AAAGGAAGAA CTAAACATAC CATGCCATAA AGGGTACATG GACCTAAGAT CCTACTTAGA AAAGAGCAGA GACAGTTATG
TCCTGTTTGA AATTATGTTG TCTTTTGTTT TGGTTGTGAC TTATCAAGTA AATATTTTGC TTTGCAAAAG TTTTGAAGCA
TGACATAATA TTGAAGGAGT CTGTGAGAGC TTTTCACTGG ATTCATAAAC CCTTAATAAA GGGTAAGATA CAGAAAAAAA
CAGTGCTGCT CCCATAAACT TATCTTTACT GTTCTTATTG GAGTTTATTC TCGTTTTGGG GGATTTTGAC ATCTCAGTCA
TCACTCTAAG CAACTTACAA ACTTTTTTCA ATTTGTATTC ATTATTATCA TGAGTTTGTC TAGCTATATT ATTGTGTTGT
TTTATCAATA ATTTTCTTTA TCTTCTCAGC TGGATGTTTG AAGAACAATT TTTTTTTCTT GCATTCTATT AAACTAAACA
GTAAGTTCAT TGAAAGCTCT CACAGACTCC TTACATATTG TATTTCATAC TTCAACTTCT CAGCTGGATG TTTGAATCAA
ATTTTGTTAA ATTCAATAGT AAGCTTTAAG CACTTATTTA TTAGTGTTAT TAGTTGAGAT GATCACATGT AGTTTTATGC
CAAAGTTACT GCACATATTT GAACAAACTA CTTAGTCAGG AAGAAGAAAA AATTAAAATT ATTCTATAGA AATTCTTTCA
TGTAATTTCT TCAACTTTTT TATTTCACTC TTCTTTTTGT AAAAGTCTTT ATAAGTTTGG AAAACCAAAT AATGATAGAT
TTCATCAGGA TCCCTTCCAT AATCCAAAAA CACAGTACAA GAATAATAGT ACAGTAAATA GATTACATAG ACCTAACAGA
ATATCTTCAA ACAAATGTTT AGTTACAGAA GGAAAATATA TATAACTACT CTAAGAAATT AACACATCGG AGGGTATATT
TATTTTGAAT ACTTACAAAT CCTTCTTGCA GAATGATGCG AACACTTTCA AGATACAACA AATGTCTTGG TTCTACGGAT
GTTACTGCTG TAGCAGAAAT TAAAACACAG GTACTCTCTT ATACTTCTGT ATCCTACTGA CCTTCATGAA GGTTTCACTA
TCTTACAAGC TATTATTGTA GTCCACACAA AACTTTTGAT CAAATCCATT AAAAGGACTT GAACCTGAAA TGACCCTTTG
AAGAAAGGGT TTTTGATGTA ACACAATTGG GTTGTTTAAT TAATGCTACA ATGGTATACA AATTTCATTG TTTTTGTTAT
GGAATAGTGC ATTTTATTTT TGGCTTTTTA TTATCATAAA TAAACAATAT ATTGGTTATA GTACAAACAT TCAATTGCAA
ACTAGAAAAT AATAATTTAT TTTGTATAAA ATAAACTTCT CTACTTTTGG TTTTCTGCTC ATAAATCTCA AGTAACTCTA
TAAAGATCAA CACTAAGAAA GGAAGAAGTG GAAAATGGAT GAGAATGAGA ATGTGATTGA GTAGAGACAA ATGTGAGGGC
AGCAGAGAGT GAAGGCAGCA AAGAAAAAAT TTCCATATCT GATTTGTTTT CTTTCATTAT CAAATTTTAT CCTTTCTTTT
ATTTTATCCT TGTAATTTAA GTACTATTAT GAGTATTTTC TACATATCTG CAGTTAATTT TATCATCTGC TAACTCATTT
AGGGTTCCTG CTACAGTTCT TCTGTTGATT TAAGCAGCGC ATCATTTCCT TATTTAAGAT TCAGACAAAA TTTAAATCAC
TCTAGTTCTT AAGAAAGACA CTTATGTTTA TTTTTGCACT ACTTAAATAT TATTAGGGTA CAGCTTTAAA TGAATATTTT
TTTCTAATAT TCAAATTATA TACTATTTGT ATTGTATTCA ATTAATGAAA TCTAAATTTA AATATAAAAT ATTAATTTAT
GAACTAGGTT TGGAGTTTTA CTAGCGTGCT TCAAATATGT GATTAGTCTC ACAAAAATTG CATTTAAGTT CTCTTTGTGG
ATAAAATTGA ATCTATCACC AAATTCTGGC ATAGTTTGTA CTTCACATTT AGACTAGAAG ATTTGAGATG CAAAGAACTA
CAAGGAATTG ACAGTTCTAG TTTAGAAATT GAATGATCCT TTTCTTTGAC ATTTTTAGAT AATCTCTTGA CATTCTTGTG
TTGTTTTGTA ATGTCAGTAT TGTTCAAGGA CAATTACTCT CCAAAACTAA TCATTTATGC TGCATTATAT CCCTCAGTAG
ACATTTCTGA TGATTTTTTT GAAGATTTTT TGTATGTTGT AAAAAAGCTA ATCACAAAAT GTATAGTATT GCTCTAGCAT
GCAATTTTGT AGAAATTACT CCAACTGGAA CTCTGCAATT AGTGATTAGA TGTAATGTAA GAACCATGGA GTCAGGTACT
GTATGATCAA ACAATCCACT CCATTTTATC CACCCCATTT TCCCTTAAGC TTGAATGTTA CCTTTCTATT AGCACTCAAT
ACACTTCTCC ATTTTATCCA TCAATGACTT GAATCCTATC ACTTGGTCTT CTCATTTTTT TTGCATGATA CGTACTTGAT
GTGGTGTTCT CTGAAATTTT CACCATAATT ACATAAAACA AGGGCAACTC TTATGTCTTG ACATTCGGGT GCCATTATAG
ATAATCTATT AGGTAGTTTT GTTATCTTTG TTGCAAATAC TTATTTTGCT TGACTGCATT GTTTTTAAAA TGTCTTTCAT
TTGGTGCTTG CTTATCATCA TTTCTCTTTA GATTTAATGG AGATTACTAT AATGATATTT TTTTTCTTTA GAAGGAAGAT
TCTAAGATGG TGGACATTCT AAGAGAAGAA ATTTCAAAGT TAGAATCAAA GCAATTGTAT GTAATCTCTT GAGATTTTCT
TTTATATTAT GGTTATTTTG CATTCTCCTC TCTTTTTTGT GTTGATAGCA GTACAACTTA CCTGTGACTA TAGACAGTTA
TTGGGTAAGG ATCTGACAGG ATTGGGAATA AAAGAATTGC AAAATATAGA GCAGCAACTC AGTGAGGGGT TATTGTCTGT
AAAGGCAAAA AAGGTCACAT TTTTTTTATC CCTTTTCCAT TTCTCTATCT TGTTTTGTTT TTTCCTTTTC ATTGAATGTC
ATCAGTAAAA CATAGTTAAT GTTTTCAGCT CAGAGCAATG TTTAACCCTT AATATTTAAC CTTTCAGGAG GAATTACTTA
TGGAGCAGCT GGAGCAATCT AGAGTTCAGG TATCAGAATC AGATGTTTGG TTTATAAAGT TATAATAAAC CTCACAGACC
TAGGAGAATT GGCAAGGGAG TTTAAAATAG TTGAGAATAT GTGAAAATGG TTTATTAATA GGTCTGATGT AGTGATATGC
ACCCTTAAAG CATTTAATCA AATCATGCAC TCTATCAGTT TACATGGTAG TGAATATCTA GTAATTTGTA AACAATAAAC
CAATCCTTTC GGCTGGATAG TTGTTAACTT CAAACCCACC ACGGCCCATT CTTAAGAGGC CACACAAGAA CTCAAAAGTC
CCTATAAACA AAATTAACAA GTTGAACTAA GGCCCAACTA GGCCTAATTT CAATATTGTA AAAAAGATAC AAAAATCCTA
TTCTGAGCCT CCTTCCGTTT TCTTGATCTT CATGGATAGA CCTCCATCAA TAACATCGAA GTAACAGAAT TTCATATTTG
ATATTTATGA ACTGCACCAG ATCAGCCTGT TAGACATTTC ACATTGGTGT GCACATACAG TTGACAAGCA TGGTCCTCAT
ATTAAAAGGC TGAAGTATTT GATTTCAGTG CTTAGAAATT TGTGGGTTAA ATTGAAATGT GTATCCATTT CAGGATATAG
TGAACTTGGG AATATACTAT TTACTTAGTC ATAGTAAGGG CAAGAGAAAA ATGTTCCTTT TTTTCTGTAA TGGTAACTTG
TTTGGTCAAT TCTTTCCAGG AACAGCGGGT CATGTTGGAG AATGAAACTT TGCGCAGACA GGCAAATATT ATTCACTTTC
TCTATGTTGT GTACAATGTT GATCTTCCAG CATCTTATCT CACTAATAGC TTTATCTTTC TTCCTATATC ATGTTATAGA
TTGAGGAGCT TCGCTGTCTG TTTCCACAAA CAGAAACAAT GGTTCCATTT CAGTATCAAC GTCCTGAAAG AAAGAACACT
TTTGTAAATA CCGGTGCCAG ATGTCTCAAC TTGGCCAATA ACTGTGGAAA TGAGAAAGGA AGTTCAGACA CAGTATTTCA
TTTGGGGTAC TGTGTTTTTT CAATTACCAC GCCTTTAAAA TAAATTGAGT AGATCTTCAC AGCCTATGTT TTGTGTGAAA
CTAAAAACAA TACTTTTCTT GATTTTCAAG GATAAAATAC TTTCACTATG ATTTGGGTTG CAGACAGTCT CAAGCGGCTG
AAACCACACA TGTTGTTCAG TACTGTCATA CTGGTTTTCA ATATCACATA TATTTACAAA ACAAGTGTCT TGCATGAATA
CTGCATAGGG TGATTTTGTG GGATATATTT TGAATTCAAC AAGTTTTCTT GCATTAGTTT TTTGGATCCT TTTCTTAACC
TCTTTCTCAG TTTTTTACCT ATAGCATTTT CAGGCCTACC TAATTAGTTT GTTAGCTATA CACACTTTTT AGTGATTTGA
ATGCACTAAA ACACTAGAAT TCTGACTTTA CTGTTGTTCA TTTTCACAAA ACACTACCTA ATTATGAGGA TTTTCCTCCT
ATTTTATGTT CATTTTCTGA CTTTACTGTC TCATTCTTTA GGTTGCCTGC TGGTGTTCAA GAGGAAGGGC CCCAAGAAAG
AAATCTTTTC AAATAACTTT TCAGAGTTCT GATTTTCTTA TTTCAACAGG GAAAATAGAA TTTCAGACAT TTATTGCAGT
TGTAGTTATG TACAATATAG ATTAGGGAGA AAGGTTATGA CTAAAAGTGA CCCTCAAGTT ATAAATTGGA ATTTGGC

>Vigan.07G187600.01
GAGTAAGTGA AATGTTAAGA AAAAGAAAAA AAAATAGAAA TGGGACCCAC AACAGGTGCA GAGGAAAATC CAAAACAGGG
CAAAAAGGAA ACAGAAACAG TCTCTAAATG CACAGAGAAC AACACGGAGC CATGCAAAGT TGCCGTTTCC AGCAAGGCCA
ACCTCTCTGT TCAGTCGTTT GAGGTAAAAC GCTTTTCAGT GTCTTCACGA AGCCACCTTT TCTTCTTCTC TTCTCCTCTC
TTCGACCAAC TCAACAGGGT CTTTTTCTTT TCAACCTCAA ACTCTGTCTT TATAATCTCT GCTCGAGTTT GAGTTGGGCA
TGTCCAATGG GTCGAGGGAA GATCGAGATC AAAAGAATCG ACAATGCCAG CAGCAGGCAA GTCACCTTCT CCAAGCGCAG
AACAGGCTTG TTCAAAAAGG CTCAAGAACT CTCCATTCTC TGTGACTCCG AGGTTGCCGT CATAGTTTTT TCCAACACTG
GCAAGCTCTT TGAGTTTTCC AGTTCAGGAA TGATGCGAAC ACTTTCAAGA TACAACAAAT GTCTTGGTTC TACGGATGTT
ACTGCTGTAG CAGAAATTAA AACACAGAAG GAAGATTCTA AGATGGTGGA CATTCTAAGA GAAGAAATTT CAAAGTTAGA
ATCAAAGCAA TTACAGTTAT TGGGTAAGGA TCTGACAGGA TTGGGAATAA AAGAATTGCA AAATATAGAG CAGCAACTCA
GTGAGGGGTT ATTGTCTGTA AAGGCAAAAA AGGAGGAATT ACTTATGGAG CAGCTGGAGC AATCTAGAGT TCAGGAACAG
CGGGTCATGT TGGAGAATGA AACTTTGCGC AGACAGATTG AGGAGCTTCG CTGTCTGTTT CCACAAACAG AAACAATGGT
TCCATTTCAG TATCAACGTC CTGAAAGAAA GAACACTTTT GTAAATACCG GTGCCAGATG TCTCAACTTG GCCAATAACT
GTGGAAATGA GAAAGGAAGT TCAGACACAG TATTTCATTT GGGGTTGCCT GCTGGTGTTC AAGAGGAAGG GCCCCAAGAA
AGAAATCTTT TCAAATAACT TTTCAGAGTT CTGATTTTCT TATTTCAACA GGGAAAATAG AATTTCAGAC ATTTATTGCA
GTTGTAGTTA TGTACAATAT AGATTAGGGA GAAAGGTTAT GACTAAAAGT GACCCTCAAG TTATAAATTG GAATTTGGC

>Vigan.07G187600.01
ATGGGTCGAG GGAAGATCGA GATCAAAAGA ATCGACAATG CCAGCAGCAG GCAAGTCACC TTCTCCAAGC GCAGAACAGG
CTTGTTCAAA AAGGCTCAAG AACTCTCCAT TCTCTGTGAC TCCGAGGTTG CCGTCATAGT TTTTTCCAAC ACTGGCAAGC
TCTTTGAGTT TTCCAGTTCA GGAATGATGC GAACACTTTC AAGATACAAC AAATGTCTTG GTTCTACGGA TGTTACTGCT
GTAGCAGAAA TTAAAACACA GAAGGAAGAT TCTAAGATGG TGGACATTCT AAGAGAAGAA ATTTCAAAGT TAGAATCAAA
GCAATTACAG TTATTGGGTA AGGATCTGAC AGGATTGGGA ATAAAAGAAT TGCAAAATAT AGAGCAGCAA CTCAGTGAGG
GGTTATTGTC TGTAAAGGCA AAAAAGGAGG AATTACTTAT GGAGCAGCTG GAGCAATCTA GAGTTCAGGA ACAGCGGGTC
ATGTTGGAGA ATGAAACTTT GCGCAGACAG ATTGAGGAGC TTCGCTGTCT GTTTCCACAA ACAGAAACAA TGGTTCCATT
TCAGTATCAA CGTCCTGAAA GAAAGAACAC TTTTGTAAAT ACCGGTGCCA GATGTCTCAA CTTGGCCAAT AACTGTGGAA
ATGAGAAAGG AAGTTCAGAC ACAGTATTTC ATTTGGGGTT GCCTGCTGGT GTTCAAGAGG AAGGGCCCCA AGAAAGAAAT
CTTTTCAAAT AA

>Vigan.07G187600.01
MGRGKIEIKR IDNASSRQVT FSKRRTGLFK KAQELSILCD SEVAVIVFSN TGKLFEFSSS GMMRTLSRYN KCLGSTDVTA
VAEIKTQKED SKMVDILREE ISKLESKQLQ LLGKDLTGLG IKELQNIEQQ LSEGLLSVKA KKEELLMEQL EQSRVQEQRV
MLENETLRRQ IEELRCLFPQ TETMVPFQYQ RPERKNTFVN TGARCLNLAN NCGNEKGSSD TVFHLGLPAG VQEEGPQERN
LFK*