GBrowse Details

Vigan.07G185200.01

Basic Information:
Name: Vigan.07G185200.01
Multiple alignment
Variant Information
Position: Chr07:25596389..25599239 (- strand)
Length: 2851
Functional Information:
Description: Similar to Uncharacterized protein. [I1KFY6, Glycine max]
GO: Biological Process: lipid metabolic process (GO:0006629)
Molecular Function: hydrolase activity (GO:0016787)
Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788)
InterPro: Lipase, GDSL (IPR001087)
SGNH hydrolase-type esterase domain (IPR013831)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.04,2.40,12.24,3.15,0.02,3.14,0.08,3.35
Arabidopsis thaliana homolog: AT1G71691.2
Automatic updates:
Name: NM_001255416 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max putative GDSL esterase/lipase (LOC100779380), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:25596389..25596564 (- strand)
Length: 176
Type: three_prime_UTR
Position: Chr07:25596565..25596785 (- strand)
Length: 221
Type: CDS
Position: Chr07:25596958..25597207 (- strand)
Length: 250
Type: CDS
Position: Chr07:25597310..25597549 (- strand)
Length: 240
Type: CDS
Position: Chr07:25597666..25597787 (- strand)
Length: 122
Type: CDS
Position: Chr07:25598743..25599025 (- strand)
Length: 283
Type: CDS
Position: Chr07:25599026..25599239 (- strand)
Length: 214
Type: five_prime_UTR

>Vigan.07G185200.01 class=Sequence position=Chr07:25596389..25599239 (- strand)
CCAGTATTTG ATATGGCCTG CAACAATGTT GGGTGCTTCA GTATGTTTGT ATGTATAATT ACTGCAAGGT AGAGAGCAGG
TGAATGTATT GATTGCATTT CAACCACCGC CATTTACCAT CTTGTATTAA ATCCTCTTCC CTCTCTTTTC ATTACCATGT
CAACTTGTTT TTGTTCATTC TTACAGATAG ATAAATCAAC AAGCTCTTTG CTCCATGTGC CTCTCTTCAC TCTCTCACAC
TTTTATGGCT AAGTTTGGAC TGTCCACATT CTTGGTGCTT TTCATGGTGC TGAGTGATGC TGCGGTGAGA GGTCAAAATG
GGAATGGGAG AGAAATGGTG CCTGCCATGT TCATATTTGG TGACTCTCTC ATTGACAATG GCAACAACAA TAACCTTCCT
TCCTTAGCTA AGGCCAACTA TTACCCTTAT GGCATCGACT TCAATGGAGG CCCTACTGGT CGCTTCTCAA ATGGCTACAC
CATGGTTGAT GAAATAGGTA TACCCTCTCT CTTTTATCAA CTATTTTTCT CTTTTTCCTA GTACTTGTCT CATGACACAA
AGCCAACCTA GATTATGGGG TTAATTCGTT TGAGTCAAAG CACATAGAAT ATGCATCAGT TTCATTATTG CAACCTTTTC
TCTTGGCATA GAATGTTTTG GCAAGCATAG GAATTAAAAG CCAAAAGCTT GAGGTATGAG GCATAATTTG CTGCAAGGAA
AAGTATCACA TGACATTATT CTAGTGTGGT AAGGTTGAGT TAGAATTAAA CTTCATGTTA TGTACTTTAA TTTGACTAAT
TAGTCACCAA TTTCAGATTC CTTGTTTTAT GACTGATTGT CCAGACAGAT TTCGAAAGAT AAAGTAATGC AATTGAATTG
TTCATTTTCT TTTGCAATAT CTTTTTTGTC ACTTTTGCCA TGAATTTCTT ACTTAGGAAG CCTACCAAGG ATACCATCAA
TGAGGTGAAT AACTGCTATA CACCTAACGG CCTATCTCTT GGGTACAACT ATTAATTATA TGAAGTAATT GCTTGCTGTA
AATTTCTCAT TTTCTCTTTT CTCCTTCAGT GACCATTTTA CTTTTTATAT GTGGTTGGTG TGTGTGGCAA AAAGGGTAGA
TAAACCTCTG TCAAGGCATT TTCTTGCAGT AAATGATGCA TTAAAAAGGA TACGGAGGCT CCTACTACAC TTTTATCTAC
ACACCCATTG AACCTACACA AGTGTTTCTC ACTAGACTGT AGTGACCAAA TAGAAATTAC TTACAAGGCA ATATAGCTCC
CATATATGAA AAAAGTGTAG TGACCAAATG CTTTCTAAAA ATAAGGCCAT AAAGATATTC TTGTTAAGCA CTAACATTTG
TTTATCAGAC TCATTAATGA CCTTAACAGT TTATCCTGAA TAATATGTAT CATTTAATTG AATTTTAGAC TGATGTGTTC
GTATCAATGC AGCTGAACTG CTTGGACTTC CCTTGATTCC TGCATACTCA GAAGCCTCAG GGAATCAAGT GCTTCATGGA
GTAAACTATG CTTCAGCTGC TGCCGGAATT CTTGATGCCA CTGGCCGAAA CTTTGTGTGT AACATCCATT CATCTTTTAG
ATTTTGACCT GAACATTACA TAAAGCAACT TTGTTTTTCA TTTGAAGAAT TTATTGAGAG GCTGAATCAT AATGGATTCT
TTTTGAGCAG GTTGGGCGAA TACCATTTGA TCAGCAACTA AGGAACTTTG AGAACACATT AAATCAAATA ACTGGGAATC
TTGGAGCAGA CTATATGGCC ACAGCGCTTG CACAATGCCT ATTCTTCGTT GGAATGGGCA GCAATGACTA CCTTAACAAC
TACCTTATGC CTAATTACCC CACCAGAAAT CAGTACAATG GACAGCAATA TGCTGATCTC TTGGTTCAAA CATATAGCCA
GCAACTCACA GTAAGATTTC TTAGTTTCTC ATATACTATT AAGTTAAACT TACTTTTTTG TCCAAGTTAA TTTCGAGGAG
AAGTTAATTG TTCATGATTA CATGTGTTAT AGAGGCTTTA CAATCTTGGA GCAAGGAAAT TTGTGATTAC TGGACTGGGG
CAAATGGGTT GTATTCCAAG CATTCTGGCT CAAAGCATGA GTGGAACTTG CTCTGAAGAA GTGAATTTGC TAGTGCAACC
CTTCAATGAA AATTTGAAGA CCGTGTTGGG CAATTTCAAT GCTAATCTAC CTGGTGCCAG ATTCATATTC GTTGACTCTT
CCCGCATGTT CCAGGACATC CTTCTCAATG CTAGATCTTA CGGTATGTAT GAATCAAAAC ATACTACTTC ATTGCAGAAC
AAAATCACAC AAATATAACT GAGTGGTGTT CATTATTTTG CTCTTATATA TGGTCTAGTT TAGCACTTTG CAATGAACAT
TTTCAACATG TCTTTCATGA TGAGACTGAT AGTGCTTACT ATCTTTCTGT GAAGGGTTTA GTGTTGTAAA TAGAGGGTGC
TGTGGCATTG GAAGAAATAG AGGCCAAATA ACATGTCTTC CATTCCAAAC TCCATGCCCT AACAGAAATC AGTATGTGTT
CTGGGATGCA TTCCACCCAA CAGAAGCAGC CAACATTCTG ATGGGAAGAA TGGCTTTCAG TGGGAATTCC AATTTTGTCT
ATCCTATAAA CATAAGGCAG CTTGCTGAGC TATGAATTGA GCCTCTATAG TTTGAATCTT GCTGTGTCAC TGTCACTCAT
TACTATATGT GGAACAACAA ATTTAATGAT CAAGTTTATA TTTAGTAATT ACTATATGTG GAACGACAAA TTTGGTATAG
GGAATGTACT GCTATCTACA TTTACTATCA CAACTGTCAT ATGAATTCGT G

>Vigan.07G185200.01
CCAGTATTTG ATATGGCCTG CAACAATGTT GGGTGCTTCA GTATGTTTGT ATGTATAATT ACTGCAAGGT AGAGAGCAGG
TGAATGTATT GATTGCATTT CAACCACCGC CATTTACCAT CTTGTATTAA ATCCTCTTCC CTCTCTTTTC ATTACCATGT
CAACTTGTTT TTGTTCATTC TTACAGATAG ATAAATCAAC AAGCTCTTTG CTCCATGTGC CTCTCTTCAC TCTCTCACAC
TTTTATGGCT AAGTTTGGAC TGTCCACATT CTTGGTGCTT TTCATGGTGC TGAGTGATGC TGCGGTGAGA GGTCAAAATG
GGAATGGGAG AGAAATGGTG CCTGCCATGT TCATATTTGG TGACTCTCTC ATTGACAATG GCAACAACAA TAACCTTCCT
TCCTTAGCTA AGGCCAACTA TTACCCTTAT GGCATCGACT TCAATGGAGG CCCTACTGGT CGCTTCTCAA ATGGCTACAC
CATGGTTGAT GAAATAGCTG AACTGCTTGG ACTTCCCTTG ATTCCTGCAT ACTCAGAAGC CTCAGGGAAT CAAGTGCTTC
ATGGAGTAAA CTATGCTTCA GCTGCTGCCG GAATTCTTGA TGCCACTGGC CGAAACTTTG TTGGGCGAAT ACCATTTGAT
CAGCAACTAA GGAACTTTGA GAACACATTA AATCAAATAA CTGGGAATCT TGGAGCAGAC TATATGGCCA CAGCGCTTGC
ACAATGCCTA TTCTTCGTTG GAATGGGCAG CAATGACTAC CTTAACAACT ACCTTATGCC TAATTACCCC ACCAGAAATC
AGTACAATGG ACAGCAATAT GCTGATCTCT TGGTTCAAAC ATATAGCCAG CAACTCACAA GGCTTTACAA TCTTGGAGCA
AGGAAATTTG TGATTACTGG ACTGGGGCAA ATGGGTTGTA TTCCAAGCAT TCTGGCTCAA AGCATGAGTG GAACTTGCTC
TGAAGAAGTG AATTTGCTAG TGCAACCCTT CAATGAAAAT TTGAAGACCG TGTTGGGCAA TTTCAATGCT AATCTACCTG
GTGCCAGATT CATATTCGTT GACTCTTCCC GCATGTTCCA GGACATCCTT CTCAATGCTA GATCTTACGG GTTTAGTGTT
GTAAATAGAG GGTGCTGTGG CATTGGAAGA AATAGAGGCC AAATAACATG TCTTCCATTC CAAACTCCAT GCCCTAACAG
AAATCAGTAT GTGTTCTGGG ATGCATTCCA CCCAACAGAA GCAGCCAACA TTCTGATGGG AAGAATGGCT TTCAGTGGGA
ATTCCAATTT TGTCTATCCT ATAAACATAA GGCAGCTTGC TGAGCTATGA ATTGAGCCTC TATAGTTTGA ATCTTGCTGT
GTCACTGTCA CTCATTACTA TATGTGGAAC AACAAATTTA ATGATCAAGT TTATATTTAG TAATTACTAT ATGTGGAACG
ACAAATTTGG TATAGGGAAT GTACTGCTAT CTACATTTAC TATCACAACT GTCATATGAA TTCGTG

>Vigan.07G185200.01
ATGTGCCTCT CTTCACTCTC TCACACTTTT ATGGCTAAGT TTGGACTGTC CACATTCTTG GTGCTTTTCA TGGTGCTGAG
TGATGCTGCG GTGAGAGGTC AAAATGGGAA TGGGAGAGAA ATGGTGCCTG CCATGTTCAT ATTTGGTGAC TCTCTCATTG
ACAATGGCAA CAACAATAAC CTTCCTTCCT TAGCTAAGGC CAACTATTAC CCTTATGGCA TCGACTTCAA TGGAGGCCCT
ACTGGTCGCT TCTCAAATGG CTACACCATG GTTGATGAAA TAGCTGAACT GCTTGGACTT CCCTTGATTC CTGCATACTC
AGAAGCCTCA GGGAATCAAG TGCTTCATGG AGTAAACTAT GCTTCAGCTG CTGCCGGAAT TCTTGATGCC ACTGGCCGAA
ACTTTGTTGG GCGAATACCA TTTGATCAGC AACTAAGGAA CTTTGAGAAC ACATTAAATC AAATAACTGG GAATCTTGGA
GCAGACTATA TGGCCACAGC GCTTGCACAA TGCCTATTCT TCGTTGGAAT GGGCAGCAAT GACTACCTTA ACAACTACCT
TATGCCTAAT TACCCCACCA GAAATCAGTA CAATGGACAG CAATATGCTG ATCTCTTGGT TCAAACATAT AGCCAGCAAC
TCACAAGGCT TTACAATCTT GGAGCAAGGA AATTTGTGAT TACTGGACTG GGGCAAATGG GTTGTATTCC AAGCATTCTG
GCTCAAAGCA TGAGTGGAAC TTGCTCTGAA GAAGTGAATT TGCTAGTGCA ACCCTTCAAT GAAAATTTGA AGACCGTGTT
GGGCAATTTC AATGCTAATC TACCTGGTGC CAGATTCATA TTCGTTGACT CTTCCCGCAT GTTCCAGGAC ATCCTTCTCA
ATGCTAGATC TTACGGGTTT AGTGTTGTAA ATAGAGGGTG CTGTGGCATT GGAAGAAATA GAGGCCAAAT AACATGTCTT
CCATTCCAAA CTCCATGCCC TAACAGAAAT CAGTATGTGT TCTGGGATGC ATTCCACCCA ACAGAAGCAG CCAACATTCT
GATGGGAAGA ATGGCTTTCA GTGGGAATTC CAATTTTGTC TATCCTATAA ACATAAGGCA GCTTGCTGAG CTATGA

>Vigan.07G185200.01
MCLSSLSHTF MAKFGLSTFL VLFMVLSDAA VRGQNGNGRE MVPAMFIFGD SLIDNGNNNN LPSLAKANYY PYGIDFNGGP
TGRFSNGYTM VDEIAELLGL PLIPAYSEAS GNQVLHGVNY ASAAAGILDA TGRNFVGRIP FDQQLRNFEN TLNQITGNLG
ADYMATALAQ CLFFVGMGSN DYLNNYLMPN YPTRNQYNGQ QYADLLVQTY SQQLTRLYNL GARKFVITGL GQMGCIPSIL
AQSMSGTCSE EVNLLVQPFN ENLKTVLGNF NANLPGARFI FVDSSRMFQD ILLNARSYGF SVVNRGCCGI GRNRGQITCL
PFQTPCPNRN QYVFWDAFHP TEAANILMGR MAFSGNSNFV YPINIRQLAE L*