GBrowse Details

Vigan.07G160900.01

Basic Information:
Name: Vigan.07G160900.01
Multiple alignment
Variant Information
Position: Chr07:22320265..22323511 (+ strand)
Length: 3247
Functional Information:
Description: Similar to Dipeptide transport ATP-binding protein dppF. [XP_007048675.1, Theobroma cacao]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1.95,3.28,2.30,2.13,2.84,1.50,3.35,2 .34
Arabidopsis thaliana homolog: AT3G05570.1
Automatic updates:
Name: NM_001250986 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527051 (LOC100527051), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001250986 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527051 (LOC100527051), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:22320265..22322614 (+ strand)
Length: 2350
Type: five_prime_UTR
Position: Chr07:22322615..22322803 (+ strand)
Length: 189
Type: CDS
Position: Chr07:22322884..22322979 (+ strand)
Length: 96
Type: CDS
Position: Chr07:22322980..22323511 (+ strand)
Length: 532
Type: three_prime_UTR

>Vigan.07G160900.01 class=Sequence position=Chr07:22320265..22323511 (+ strand)
AACGCTTGCC TCTTTCTTCG AACCCTTCCC CAAATCCTAA GTACTGCATC TCATCGGATT CCCGTTTCTC GTCGGACCGC
CGTCGACTCC ATCGCGATCT TCCTTTTCGC CGGACCTCCG TCGACTCCGC CGCAGGTTTG GTTTGGTTTG GTTTGTATTA
TTTTTCCGTT TCGCTCAACT CCCATAACAG AAATATATTG CACTTTGGAA ATCACTACTC ATTTGCATCC CAGAATAATG
CTAAGACTGC CTTTGGATGA ACAAATGAAA ATTATTACTT GAAGATACTT TTCAATTGTC CCAATTTTAA CTAAATATAA
ACTCTGTATT AGTAGCTTTT TCATTGTTGG TTTATCGCCA ATATACAAAT GCAAAAGAAA AAAAAAACTT GGATGTGAAT
TGGAGGAGTA ATTGTATAAG TTTCTTTGTC ATATTCCTTA AACGTCAGTC TGTGACATTT GAAGAATCGA ACACCGACCC
TTCTATTGTC ACTTTGTTCC TCTTCCGTTG GTCATGTTCC AAATGTTCTG CTCAGTTGTC AAATCAATTA GGGCCATGTT
TTTCTAGTTA GTTCTGATTA TTAAAGCAAA TTGCAAGAGT AACAAGAGCG TTTCTCAAGT AAATTGCATA TTTTACCTTG
GCCTGGATCT GATTTCATGG TGGTCTAAGA ACCAGACCTT GGTTGCTCAC TCTTGCAGTA GCCAAATATC GTGGCACTTT
ACGGACATGT CATCGCTTTA CGAATGTCCG CAAACGGGTA AAAGACCGAA CCAGAAATAT ATTTTTTTAT CAAGAACCAA
AACTCGAATT TTTTTTTTAT CGAGGGCTAT GTGCAAAATT TGCAAATTTA TGAGGACCAA AAAGTTATTC AAGCCTTAAA
ATAATCTATA CATAAAGGTT TTGTTTTTTG TCTTTTCAAT TTCGACCCCT TTCTCGCCAT CTAAGTTTGT GGTTTGAGTC
TCAGGATCAA CTTCGATGTC TTCATTATTT CAGTGAATTT GGACTCTTAT TGAGTTTCTC TCTGGAAATC AAACTAACAA
TACACAGGGC TTTTCATTTT TAATTTTTTA CTTACTGCAT GCCTTACTCC AATGGGTTAT TCTCAGACCT GTTCTGCATT
ATTGGCACGG GGTTATTCTT CTGTCAGCAA TAAAATTTTA GTTGCTACCA TCAGTTGATG TGCTAACATG TACTGTTTAT
TTCTTCAGAA GGCTAACATA AGGATTTTAA GCATGGAAAT TTTAGGATTT TGGTTCCTTT AAATTTGATG TCAGTTTTAT
TCGGAAATCT TGGTCTGGTT TTGTATTTGA TCTGTTTGTA ACATTACATA ATGTTATTAC TTGTTTTTGG GTAATTTAAC
TGATAGCTTA GATTTCTTTA TTATTTCTTC TTTGGATGTT GTGATCTGTC TTGGTAAGAA AGTTTTTCAT GTATTTCTCT
TTTATTGTGT AGATTTGGTG TTTTCTGCAA GAGGCTGTTT GAAAATTGTG ATGATGTTCT TTGTTTCTTG CTTTATTTTT
TATCATTGTT CATTGCTTTT AGCAAGCCAA ACTTGTTCCT TTCAATAACT GCTTCCTCTT AAAGTTTAAA ATTTTAGGTG
AAGTGCATGA ATGATTTGTA CCTAATATGC CAATAGGACC AAAGAATTTA AATGGCCAAC CAAAATCACG AGGACATGTG
ACGTGGTACA AAGCAATGAT GGACCAAAGG TTTGAAGCAT AAATTAGAAA GGGTAGGAAG CTAAAAAAAG CTACAGACGA
GGGAAAACAG TCACAGTTGG TTAGCTAGGG TGGGAAAGGG ATCTGTGTGT AAGACTCGCT ATAGGGAGGT AAGGATTGTG
TACGTGAGTT TGGTGTTTTT GCATTTAGTT ATTTTCCTTT CGCTGTAAAC TGGGGTAGGG GTGGTAGCAA GGATTAAACT
TTTGGCCACT TGGTTGTAGA GACTTTGATA CATGTCAAGA ATCAACAACT ATTAGTCAGT GTTTGCTTCA AATTTCAATA
AATCGTTGTA AAAAGCCATT GTTCGTATGA GTTTATGTGT TTGGTTTTAT CTGGTTATCT TTCTGCAGGG AATGACTAGC
AGTCATTCTA AATGACTTAG TGATAACATT CTCTCTTATG TTTTCTAGAG TATTATTCAT AGAATTTCAA ATGGTGTACC
ATTGCCTTTT AGTTCTCCAT AAATTTAAGG TTCCTCACTA GAATGAATTA AATCGAATTT GTTATTGCAT TTTAATATTT
TGCTTGATGA TGATAGCGCA GCGTATGTGT GGGATAATAA TGATTTCCTA AATTTCCTGA TGATGATTTT GTTGGTGTGT
AAATTGTTTC AGCTATAAGG CTTGGAGAGC ATGGACACTC AGAAAAGCCA ACCAGAAAAC CAGTCCTCTT CCGCAACAAC
TCCTCCGGTT GTAACTTCAT GTCGAAAGAA GAAGAATGAA GAAGCTGCTT TCTTGGAAGA TTTGAAGGAA CATATTGACG
AGTTTTTAAG TGCTTCTGTG GATGAACACA AAAGTTGCTT TAAGAAAACA ATTCAAAAGG TTGGTACCTG AATTTATTGA
TAAAAATCTT TCCAACCTTT CTCATTTGCT GATAAAGAGT GGTTTTTGAT CAATTTCAGA TGTTTGGTTT GTCAAAGGCT
GTTACAGAAG GGCACTCCAA TACCTCCAAA GAAGTAGAAA GTTCTCTACC TCTTAGGACA ACTGTACAGG ACTAGATTTT
ACCTGAAGCA TGTTGTTATA ATACTCTCGT ATAAATAGTT GTTTGTGAAT ACTCCATTCA TGGGTTGTTT TTGTGAGCAC
TGTTTAACCA AAGGAGTATT CACAGTACAT TTTTTCTAAC ACATCCTATT ATTGACTACT TGGAAAATGT AATTCATAAT
TATGAAATTA GGAAAGACGT TTGTTAAATA AAAAGTGAAC CAACGAAAAA GTTGGGATTT CTAATAACTT GTAGCTGACT
TGGAATATTT TGCACCAAAA CTTGCAGACA TTTGTTTTGA AGTCAACGTA ACTGTCTTGT TTGCCACTGC ACCAAATCTT
GAAAACAATG TTTCTGTAAG CAGATGACGA TGCTCTGTTG CACTGAGGAA CACACATGGA GCATATTTGT TCACTTGAAA
CCTTAATTTC AAGAATGAAT AGAAAGAAAG AAATGACTCA AACAATGTGT GGTGTCTGAA ACCCCAATGC TTATGGCAGG
GTGTTTCTTT TGCCACCTTA TTAATTTCCT GAGTTATCAT CAGCCAT

>Vigan.07G160900.01
AACGCTTGCC TCTTTCTTCG AACCCTTCCC CAAATCCTAA GTACTGCATC TCATCGGATT CCCGTTTCTC GTCGGACCGC
CGTCGACTCC ATCGCGATCT TCCTTTTCGC CGGACCTCCG TCGACTCCGC CGCAGGTTTG GTTTGGTTTG GTTTGTATTA
TTTTTCCGTT TCGCTCAACT CCCATAACAG AAATATATTG CACTTTGGAA ATCACTACTC ATTTGCATCC CAGAATAATG
CTAAGACTGC CTTTGGATGA ACAAATGAAA ATTATTACTT GAAGATACTT TTCAATTGTC CCAATTTTAA CTAAATATAA
ACTCTGTATT AGTAGCTTTT TCATTGTTGG TTTATCGCCA ATATACAAAT GCAAAAGAAA AAAAAAACTT GGATGTGAAT
TGGAGGAGTA ATTGTATAAG TTTCTTTGTC ATATTCCTTA AACGTCAGTC TGTGACATTT GAAGAATCGA ACACCGACCC
TTCTATTGTC ACTTTGTTCC TCTTCCGTTG GTCATGTTCC AAATGTTCTG CTCAGTTGTC AAATCAATTA GGGCCATGTT
TTTCTAGTTA GTTCTGATTA TTAAAGCAAA TTGCAAGAGT AACAAGAGCG TTTCTCAAGT AAATTGCATA TTTTACCTTG
GCCTGGATCT GATTTCATGG TGGTCTAAGA ACCAGACCTT GGTTGCTCAC TCTTGCAGTA GCCAAATATC GTGGCACTTT
ACGGACATGT CATCGCTTTA CGAATGTCCG CAAACGGGTA AAAGACCGAA CCAGAAATAT ATTTTTTTAT CAAGAACCAA
AACTCGAATT TTTTTTTTAT CGAGGGCTAT GTGCAAAATT TGCAAATTTA TGAGGACCAA AAAGTTATTC AAGCCTTAAA
ATAATCTATA CATAAAGGTT TTGTTTTTTG TCTTTTCAAT TTCGACCCCT TTCTCGCCAT CTAAGTTTGT GGTTTGAGTC
TCAGGATCAA CTTCGATGTC TTCATTATTT CAGTGAATTT GGACTCTTAT TGAGTTTCTC TCTGGAAATC AAACTAACAA
TACACAGGGC TTTTCATTTT TAATTTTTTA CTTACTGCAT GCCTTACTCC AATGGGTTAT TCTCAGACCT GTTCTGCATT
ATTGGCACGG GGTTATTCTT CTGTCAGCAA TAAAATTTTA GTTGCTACCA TCAGTTGATG TGCTAACATG TACTGTTTAT
TTCTTCAGAA GGCTAACATA AGGATTTTAA GCATGGAAAT TTTAGGATTT TGGTTCCTTT AAATTTGATG TCAGTTTTAT
TCGGAAATCT TGGTCTGGTT TTGTATTTGA TCTGTTTGTA ACATTACATA ATGTTATTAC TTGTTTTTGG GTAATTTAAC
TGATAGCTTA GATTTCTTTA TTATTTCTTC TTTGGATGTT GTGATCTGTC TTGGTAAGAA AGTTTTTCAT GTATTTCTCT
TTTATTGTGT AGATTTGGTG TTTTCTGCAA GAGGCTGTTT GAAAATTGTG ATGATGTTCT TTGTTTCTTG CTTTATTTTT
TATCATTGTT CATTGCTTTT AGCAAGCCAA ACTTGTTCCT TTCAATAACT GCTTCCTCTT AAAGTTTAAA ATTTTAGGTG
AAGTGCATGA ATGATTTGTA CCTAATATGC CAATAGGACC AAAGAATTTA AATGGCCAAC CAAAATCACG AGGACATGTG
ACGTGGTACA AAGCAATGAT GGACCAAAGG TTTGAAGCAT AAATTAGAAA GGGTAGGAAG CTAAAAAAAG CTACAGACGA
GGGAAAACAG TCACAGTTGG TTAGCTAGGG TGGGAAAGGG ATCTGTGTGT AAGACTCGCT ATAGGGAGGT AAGGATTGTG
TACGTGAGTT TGGTGTTTTT GCATTTAGTT ATTTTCCTTT CGCTGTAAAC TGGGGTAGGG GTGGTAGCAA GGATTAAACT
TTTGGCCACT TGGTTGTAGA GACTTTGATA CATGTCAAGA ATCAACAACT ATTAGTCAGT GTTTGCTTCA AATTTCAATA
AATCGTTGTA AAAAGCCATT GTTCGTATGA GTTTATGTGT TTGGTTTTAT CTGGTTATCT TTCTGCAGGG AATGACTAGC
AGTCATTCTA AATGACTTAG TGATAACATT CTCTCTTATG TTTTCTAGAG TATTATTCAT AGAATTTCAA ATGGTGTACC
ATTGCCTTTT AGTTCTCCAT AAATTTAAGG TTCCTCACTA GAATGAATTA AATCGAATTT GTTATTGCAT TTTAATATTT
TGCTTGATGA TGATAGCGCA GCGTATGTGT GGGATAATAA TGATTTCCTA AATTTCCTGA TGATGATTTT GTTGGTGTGT
AAATTGTTTC AGCTATAAGG CTTGGAGAGC ATGGACACTC AGAAAAGCCA ACCAGAAAAC CAGTCCTCTT CCGCAACAAC
TCCTCCGGTT GTAACTTCAT GTCGAAAGAA GAAGAATGAA GAAGCTGCTT TCTTGGAAGA TTTGAAGGAA CATATTGACG
AGTTTTTAAG TGCTTCTGTG GATGAACACA AAAGTTGCTT TAAGAAAACA ATTCAAAAGA TGTTTGGTTT GTCAAAGGCT
GTTACAGAAG GGCACTCCAA TACCTCCAAA GAAGTAGAAA GTTCTCTACC TCTTAGGACA ACTGTACAGG ACTAGATTTT
ACCTGAAGCA TGTTGTTATA ATACTCTCGT ATAAATAGTT GTTTGTGAAT ACTCCATTCA TGGGTTGTTT TTGTGAGCAC
TGTTTAACCA AAGGAGTATT CACAGTACAT TTTTTCTAAC ACATCCTATT ATTGACTACT TGGAAAATGT AATTCATAAT
TATGAAATTA GGAAAGACGT TTGTTAAATA AAAAGTGAAC CAACGAAAAA GTTGGGATTT CTAATAACTT GTAGCTGACT
TGGAATATTT TGCACCAAAA CTTGCAGACA TTTGTTTTGA AGTCAACGTA ACTGTCTTGT TTGCCACTGC ACCAAATCTT
GAAAACAATG TTTCTGTAAG CAGATGACGA TGCTCTGTTG CACTGAGGAA CACACATGGA GCATATTTGT TCACTTGAAA
CCTTAATTTC AAGAATGAAT AGAAAGAAAG AAATGACTCA AACAATGTGT GGTGTCTGAA ACCCCAATGC TTATGGCAGG
GTGTTTCTTT TGCCACCTTA TTAATTTCCT GAGTTATCAT CAGCCAT

>Vigan.07G160900.01
ATGGACACTC AGAAAAGCCA ACCAGAAAAC CAGTCCTCTT CCGCAACAAC TCCTCCGGTT GTAACTTCAT GTCGAAAGAA
GAAGAATGAA GAAGCTGCTT TCTTGGAAGA TTTGAAGGAA CATATTGACG AGTTTTTAAG TGCTTCTGTG GATGAACACA
AAAGTTGCTT TAAGAAAACA ATTCAAAAGA TGTTTGGTTT GTCAAAGGCT GTTACAGAAG GGCACTCCAA TACCTCCAAA
GAAGTAGAAA GTTCTCTACC TCTTAGGACA ACTGTACAGG ACTAG

>Vigan.07G160900.01
MDTQKSQPEN QSSSATTPPV VTSCRKKKNE EAAFLEDLKE HIDEFLSASV DEHKSCFKKT IQKMFGLSKA VTEGHSNTSK
EVESSLPLRT TVQD*