GBrowse Details

Vigan.07G107200.01

Basic Information:
Name: Vigan.07G107200.01
Multiple alignment
Variant Information
Position: Chr07:9701004..9705536 (+ strand)
Length: 4533
Functional Information:
Description: Similar to uncharacterized protein. [C6TDJ6, Glycine max]
GO: Biological Process: protein phosphorylation (GO:0006468)
Molecular Function: protein kinase activity (GO:0004672)
Molecular Function: protein serine/threonine kinase activity (GO:0004674)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
InterPro: Protein kinase domain (IPR000719)
Serine/threonine-protein kinase, active site (IPR008271)
Protein kinase-like domain (IPR011009)
Concanavalin A-like lectin/glucanase, subgroup (IPR013320)
Protein kinase, ATP binding site (IPR017441)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.84,5.94,4.04,2.88,10.92,12.57,2.84 ,3.58
Arabidopsis thaliana homolog: AT3G58690.1
Automatic updates:
Name: NM_001255059 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max serine/threonine-protein kinase PBS1-like (LOC100804893), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001255059 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max serine/threonine-protein kinase (LOC100804893), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:9701004..9701228 (+ strand)
Length: 225
Type: five_prime_UTR
Position: Chr07:9701229..9701385 (+ strand)
Length: 157
Type: CDS
Position: Chr07:9702530..9702774 (+ strand)
Length: 245
Type: CDS
Position: Chr07:9703003..9703138 (+ strand)
Length: 136
Type: CDS
Position: Chr07:9704439..9704697 (+ strand)
Length: 259
Type: CDS
Position: Chr07:9704820..9704952 (+ strand)
Length: 133
Type: CDS
Position: Chr07:9705075..9705338 (+ strand)
Length: 264
Type: CDS
Position: Chr07:9705339..9705536 (+ strand)
Length: 198
Type: three_prime_UTR

>Vigan.07G107200.01 class=Sequence position=Chr07:9701004..9705536 (+ strand)
GCAAATTGCA AGAAGTTGAG GGACGAAGAT GCAAAAGAGA AATGTCAGTA TCAGCACTGT AGGCGGCAGA GTAAAAAGGG
CAGAGGGAGG GAGAGTGAGC CAAGTCAGAG TGTGTCTTGC AAGAAGCTCC GACGCAGCCT TTTAACCATT TTCGCTTCTT
CTCGCATTGC CACTATGCTT TAACCATTTC TAGGGTTAGG GTTTTTGCAT CTCAGAGAAA TCTAAATGGA CGAAGATTAT
GACTACAGAA GGAAGGCCAA GATTGCTCTC ATCGCCATTT TGGTCTTCGC TTCCCTCGCC GTCTTTGCCT TGTTCGTTGC
CTTTACTTAC TACTGCTACA TCCTCAACAA GGTCTCCAAC CGCCGCAAAA GCCTCAAAAA AGGTTTGGCT CTCTTTCGGA
AATGTGCTGA ACTTCAATGT TCGCTTTGTG TTCTTCTGCA AACGCCTGAG ATTATTCGAT GGAACTGTTG CTGACCATTC
TGTACTAACA TGCAGTTGAG TTTTACAGTT TTTGAAAAAA AGTTGATAAC ATTCATTTAG GTGTCATGTA GGAGAATTTA
TTATACAGTT TGAGTTTTTC AGTTTATGAA AAAAATTAAT AATCTTTAGG TGACGTGTGA GTTATTGTTG TTAATTCTTT
TATGCGAGTT TGAAAATTTA AAGACTTGAC ACATGAAGAC TTGTCAGGTG GTGGTTTGGG TCTGTCTAAT AATTTATTGT
CATGTGGAGA TTAGTTTTGA TTACGGTGTG GTTTCGTTTG ATTGAAGGGA TGTGTTAGAT TTAGCGCACC GATAGCAGGC
TATAGTATCT CATGTGCTGT TTTATTTTGT TTTGATTGAG ATTTTGCTCG TCTTATGTTT TCCCTCTCCA GGATTTGGGC
CTATTGGAAA TTCTGATAAA ATTGAGTTGT GATCCTTTTG TCAAAAAAAT TCCTTTCATG GATTCACAAA TAATTACGAA
ATGGTGCCGT ATTTTTATTC TGTTTTCAGT TCTCAACAAA GATGAATATT AACAAATTGA CAACGGTGAA AATACCATTT
TTTCCTATGC AACTGTTTGA AAATACTGAA CAAAGTGAAA ATAATATGAT TTTATTTTAA TTATCCGTGA AAGCAAGGAA
AGAAAATGGA AATTACCTAT TCAAGCCAAG TTCATCCGTA TATTTCCTTT GTATTTACAT TTAATTAGTT TAATTAATGA
TCACCTATCA ATCTCGACAC TTGGAAAAAT AGTAAGTATA AATATTAATA CTGCCAGTTC ATTGATATTC ATTTATATAT
TTTTTTCTAC CGGGTGTAAT TAATTCTCAT CTATATTGTT TTAGAGTATT CATTAGAAGG GAAAGGGAAG CACATTCAGT
GTTGTTATGT TCCACCTTTT TTTTTTCTAG ATTTTCAACT GAGTGGTTTG AAAGTAGCTT CTTTCTGTGT TTTCACTTTA
AAACTTTATA TCTTTACTTT TTTTCTACTT TACTTGAGTA AATTGAGGTC CCACTTACTG ACAGATTTTG CTTGGTTTTA
TATTAGTTGA AGACGCAAAC CTTAATGAGA ATAGTGACTT TGCAAATCTG CAAGTTATTG CCGAGAAAGG ACTTCAGGTG
TTCACTTTCA AGCAGCTGCA TTCTGCAACA GGGGGCTTCA GCAAGTCGAA TGTCATTGGT CATGGTGGAT TTGGACTTGT
TTACCGGGGA GTGCTCAATA ATGGCAGGAA AGTTGCCATT AAATTCATGG ATCAGGCAGG AAAGCAGGGG GAAGAAGAAT
TTAAAGTAGA GGTCAGTTAC TTCTTAGAAC ATTTTGACCA GCGCTGCTTC TTTTCTAGAG ACTATGGGAA AGGAATGCAT
TGTTCTTCAT ACTTATGCGT TTGATTTCCC TTGTAATCAA ATTAGTTAAA TTTTTAAATC ATACGCTTTT TGGCTGAATC
AATGAATTAA ATAGCTATAG ATGTCTTTTA AATACATTTT GATAATTGAA TTGAATTGGT TGCTTTCATG TCACTGTAGG
TGGAATTGCT AAGCCGGTTG CATTCACCAT ATCTACTGGC ATTGCTTGGG TACTGCTCTG ATAGTAATCA TAAATTGCTG
GTGTATGAAT TTATGGCTAA TGGTGGACTG CAGGAACATC TTTATCCTGT TAACAGTAAG TTATGAAATA TATATTTGCT
AGAAAGCTTT TATTCTTTGC TGATTTAAAA TGCTGCGAAT GGATGATTAC TAATAACTTT TCATACTTGA CAGACAGTAG
TCAAGACTCT AATCCTCATG ATGGGTGGGT CTGTAATATG TCTATGGAAT TTTGATGTAA CAATCTCGGG TTTTGCTATA
TACTTATTCT GTTTGCTCAA TAGAGGGGCC GGAACAAGAA AAACTTGTTG AAAACCTTTT TTTAGTTTGA ATGAGTAACA
CTCAGTTAGA AACATATATG ATGATAGACT AATCTGTTAA TCTTGCAGTA TTGAATATTT GATTAAAATT GATGATATTA
TTGAATGGAA ACAGCCTGCC AGCGTGTACC CAGTTTGACC ATTACATTTG GTACTCTGAT TAACGGATTC CTTACATACA
TTCCTCTGTT CTGTTGTGTA AAATTGAATG GCATGTCCAT ATAAGCAAAA AAAAGTTTTC ATAAAATTCT CTCTTGCATT
CTCTTTTCCG AACTTCTTCA CTCTGAAAGG GTTTTTCTTC CCTTGTAAAG TTTATGATGA CTATGGGTTG AAAGTGACAC
ATTGAACTAT GTTCCTCGCA TATTACACAA TATGGATAGT GGCCTTGAAG TGATAACCAT GTTATATCAA TCTGAATTTA
CATTATATGT TCGATTTGTT ACTGCTTTTT CTGATGTCTA CATTTTACAT AGATAGCTCG TAGGTGCGTA AGTAATTTGT
ATGCGATCTT TGAGGAAAAG TCTTAAGTTG GTCAGTTTCT GTATAATTGA CAATCTTGCT AGAGAAGAGA GATTTACCTC
CTGATTAATT TTGCACATCC TCCAATAAGT TGCAATACGT CCCTCTAAAT CTCTAGGTGT ATTGAACACT GTAAAAGGAA
ATTTTTGATG GGTCATGTAT GGCATAAAGT TTGTTTCAAA ATAATTTCTA TTTTTAGTTT GTCTATTTGA TCTATTATAA
GAACTTTGCC AGAACCTGGA GCAAAAATTC TGCATATTAT CTTTATTGAT ACCATGAAAA CAAAATTTTG CTATGATGTG
TTGGAGAATG TTATAATTGT TTGTTATTCC ATATTTTTAT TGATATTTTT TTACACATTT GAGATAAAAA AAATCTTGTT
GTTTTGTCTA CCCTTATTTT CTTTTAAAAT TTTCATCAGT GGGCTATTTA ATATAAAGTG TTCAAGAGTG CTGTGTCTGC
AGCCATGTTT GCTATTTTTT TTTGTTAGTT ATTTTGTATG TTTGAGTTGG TTTTGATCAA TTGATTTTCT TGTAGATTCT
ATTATTACAC CCATAAAGTT GGATTGGGAA ACTCGATTAA GAATAGCACT TGAAGCTGCT AGGGGGTTAG AATATCTTCA
TGAGCATGTC AGTCCCCCAG TTATTCACAG AGATTTTAAG AGCAGTAACA TCCTCTTGGA TAAGAAATTT CATGCCAAAG
TTTCTGATTT TGGATTGGCA AAGCTGGGAC CTGATAGAGC TGGTGGACAT GTTTCAACTC GAGTTTTGGG CACCCAAGGA
TATGTTGCTC CCGAGTAGAA ACCTCACCTT GTTTTGGTCA TTTTGTGTAA TCTTCATTCT TATTTCAAGA GTTTTCCTTT
GAATAATTCA TCTCATGAAA AACTAATTTT GTGTTTCTCA ATGTTTGTTT GTGCAGATAT GCACTAACAG GGCATTTAAC
CACAAAATCA GATGTGTACA GTTATGGTGT TGTACTTTTG GAGCTGCTCA CTGGCCGAGT GCCAGTAGAT ATGAAGAGAC
CTCCCGGAGA AGGTGTTCTT GTTTCTTGGG TGCGTTTGTT ACTTCTTTCC ACAAATCAAC TGCTTGGTGA TAGTTATTTA
ATCAATTCGT ATTTCCACCA ATCTTAGCAC TTCCTTTTTC TAACAAACTT GCATGTGCGA TATGTGTTTA GGCTCTGCCT
CTTTTGACCG ATAGGGAAAA GGTTGTAAAG ATTATGGATC CTTCATTGGA GGGACAGTAC TCTATGAAAG AGGTTGTCCA
GGTGGCTGCA ATTGCTGCAA TGTGTGTGCA ACCCGAGGCA GACTATCGTC CTCTCATGGC AGATGTTGTG CAGTCATTGG
TTCCACTGGT TAAGACTCAA AGGTCCCCTT CAAAGGTGGG AAGCTGCTCT AGTTTCCACT CTCCCAAGTT GTCCCCCGGC
CCAACATCTA CTTAGTGCAT GTAACATATA TTATCAACAT TTAAATGATG GATAGGTACA TGCTCACCTA ACTTGTATCT
GTATGCTTGG TATTAGTTGC CGTTTCTTTG TAATCTTGAA CAATGCGATA CATTTTGGTG AGGAAAAAAA TGGTGGGTTT
AATGCTAATG TTCAAATTGA TGAAAGATTA AGACTTGTTC ATCTCAGTTT GTG

>Vigan.07G107200.01
GCAAATTGCA AGAAGTTGAG GGACGAAGAT GCAAAAGAGA AATGTCAGTA TCAGCACTGT AGGCGGCAGA GTAAAAAGGG
CAGAGGGAGG GAGAGTGAGC CAAGTCAGAG TGTGTCTTGC AAGAAGCTCC GACGCAGCCT TTTAACCATT TTCGCTTCTT
CTCGCATTGC CACTATGCTT TAACCATTTC TAGGGTTAGG GTTTTTGCAT CTCAGAGAAA TCTAAATGGA CGAAGATTAT
GACTACAGAA GGAAGGCCAA GATTGCTCTC ATCGCCATTT TGGTCTTCGC TTCCCTCGCC GTCTTTGCCT TGTTCGTTGC
CTTTACTTAC TACTGCTACA TCCTCAACAA GGTCTCCAAC CGCCGCAAAA GCCTCAAAAA AGTTGAAGAC GCAAACCTTA
ATGAGAATAG TGACTTTGCA AATCTGCAAG TTATTGCCGA GAAAGGACTT CAGGTGTTCA CTTTCAAGCA GCTGCATTCT
GCAACAGGGG GCTTCAGCAA GTCGAATGTC ATTGGTCATG GTGGATTTGG ACTTGTTTAC CGGGGAGTGC TCAATAATGG
CAGGAAAGTT GCCATTAAAT TCATGGATCA GGCAGGAAAG CAGGGGGAAG AAGAATTTAA AGTAGAGGTG GAATTGCTAA
GCCGGTTGCA TTCACCATAT CTACTGGCAT TGCTTGGGTA CTGCTCTGAT AGTAATCATA AATTGCTGGT GTATGAATTT
ATGGCTAATG GTGGACTGCA GGAACATCTT TATCCTGTTA ACAATTCTAT TATTACACCC ATAAAGTTGG ATTGGGAAAC
TCGATTAAGA ATAGCACTTG AAGCTGCTAG GGGGTTAGAA TATCTTCATG AGCATGTCAG TCCCCCAGTT ATTCACAGAG
ATTTTAAGAG CAGTAACATC CTCTTGGATA AGAAATTTCA TGCCAAAGTT TCTGATTTTG GATTGGCAAA GCTGGGACCT
GATAGAGCTG GTGGACATGT TTCAACTCGA GTTTTGGGCA CCCAAGGATA TGTTGCTCCC GAATATGCAC TAACAGGGCA
TTTAACCACA AAATCAGATG TGTACAGTTA TGGTGTTGTA CTTTTGGAGC TGCTCACTGG CCGAGTGCCA GTAGATATGA
AGAGACCTCC CGGAGAAGGT GTTCTTGTTT CTTGGGCTCT GCCTCTTTTG ACCGATAGGG AAAAGGTTGT AAAGATTATG
GATCCTTCAT TGGAGGGACA GTACTCTATG AAAGAGGTTG TCCAGGTGGC TGCAATTGCT GCAATGTGTG TGCAACCCGA
GGCAGACTAT CGTCCTCTCA TGGCAGATGT TGTGCAGTCA TTGGTTCCAC TGGTTAAGAC TCAAAGGTCC CCTTCAAAGG
TGGGAAGCTG CTCTAGTTTC CACTCTCCCA AGTTGTCCCC CGGCCCAACA TCTACTTAGT GCATGTAACA TATATTATCA
ACATTTAAAT GATGGATAGG TACATGCTCA CCTAACTTGT ATCTGTATGC TTGGTATTAG TTGCCGTTTC TTTGTAATCT
TGAACAATGC GATACATTTT GGTGAGGAAA AAAATGGTGG GTTTAATGCT AATGTTCAAA TTGATGAAAG ATTAAGACTT
GTTCATCTCA GTTTGTG

>Vigan.07G107200.01
ATGGACGAAG ATTATGACTA CAGAAGGAAG GCCAAGATTG CTCTCATCGC CATTTTGGTC TTCGCTTCCC TCGCCGTCTT
TGCCTTGTTC GTTGCCTTTA CTTACTACTG CTACATCCTC AACAAGGTCT CCAACCGCCG CAAAAGCCTC AAAAAAGTTG
AAGACGCAAA CCTTAATGAG AATAGTGACT TTGCAAATCT GCAAGTTATT GCCGAGAAAG GACTTCAGGT GTTCACTTTC
AAGCAGCTGC ATTCTGCAAC AGGGGGCTTC AGCAAGTCGA ATGTCATTGG TCATGGTGGA TTTGGACTTG TTTACCGGGG
AGTGCTCAAT AATGGCAGGA AAGTTGCCAT TAAATTCATG GATCAGGCAG GAAAGCAGGG GGAAGAAGAA TTTAAAGTAG
AGGTGGAATT GCTAAGCCGG TTGCATTCAC CATATCTACT GGCATTGCTT GGGTACTGCT CTGATAGTAA TCATAAATTG
CTGGTGTATG AATTTATGGC TAATGGTGGA CTGCAGGAAC ATCTTTATCC TGTTAACAAT TCTATTATTA CACCCATAAA
GTTGGATTGG GAAACTCGAT TAAGAATAGC ACTTGAAGCT GCTAGGGGGT TAGAATATCT TCATGAGCAT GTCAGTCCCC
CAGTTATTCA CAGAGATTTT AAGAGCAGTA ACATCCTCTT GGATAAGAAA TTTCATGCCA AAGTTTCTGA TTTTGGATTG
GCAAAGCTGG GACCTGATAG AGCTGGTGGA CATGTTTCAA CTCGAGTTTT GGGCACCCAA GGATATGTTG CTCCCGAATA
TGCACTAACA GGGCATTTAA CCACAAAATC AGATGTGTAC AGTTATGGTG TTGTACTTTT GGAGCTGCTC ACTGGCCGAG
TGCCAGTAGA TATGAAGAGA CCTCCCGGAG AAGGTGTTCT TGTTTCTTGG GCTCTGCCTC TTTTGACCGA TAGGGAAAAG
GTTGTAAAGA TTATGGATCC TTCATTGGAG GGACAGTACT CTATGAAAGA GGTTGTCCAG GTGGCTGCAA TTGCTGCAAT
GTGTGTGCAA CCCGAGGCAG ACTATCGTCC TCTCATGGCA GATGTTGTGC AGTCATTGGT TCCACTGGTT AAGACTCAAA
GGTCCCCTTC AAAGGTGGGA AGCTGCTCTA GTTTCCACTC TCCCAAGTTG TCCCCCGGCC CAACATCTAC TTAG

>Vigan.07G107200.01
MDEDYDYRRK AKIALIAILV FASLAVFALF VAFTYYCYIL NKVSNRRKSL KKVEDANLNE NSDFANLQVI AEKGLQVFTF
KQLHSATGGF SKSNVIGHGG FGLVYRGVLN NGRKVAIKFM DQAGKQGEEE FKVEVELLSR LHSPYLLALL GYCSDSNHKL
LVYEFMANGG LQEHLYPVNN SIITPIKLDW ETRLRIALEA ARGLEYLHEH VSPPVIHRDF KSSNILLDKK FHAKVSDFGL
AKLGPDRAGG HVSTRVLGTQ GYVAPEYALT GHLTTKSDVY SYGVVLLELL TGRVPVDMKR PPGEGVLVSW ALPLLTDREK
VVKIMDPSLE GQYSMKEVVQ VAAIAAMCVQ PEADYRPLMA DVVQSLVPLV KTQRSPSKVG SCSSFHSPKL SPGPTST*