GBrowse Details

Vigan.07G085500.01

Basic Information:
Name: Vigan.07G085500.01
Multiple alignment
Variant Information
Position: Chr07:7200740..7201906 (+ strand)
Length: 1167
Functional Information:
Description: Similar to Melanoma inhibitory activity protein 3, putative. [XP_007045610.1, Theobroma cacao]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.03,0.15,0.04,0.11,0.37,0.19,2.75
Arabidopsis thaliana homolog: AT3G21710.2
Automatic updates:
Name: NM_001248642 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306218 (LOC100306218), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:7200740..7200878 (+ strand)
Length: 139
Type: five_prime_UTR
Position: Chr07:7200879..7201217 (+ strand)
Length: 339
Type: CDS
Position: Chr07:7201341..7201403 (+ strand)
Length: 63
Type: CDS
Position: Chr07:7201519..7201674 (+ strand)
Length: 156
Type: CDS
Position: Chr07:7201675..7201906 (+ strand)
Length: 232
Type: three_prime_UTR

>Vigan.07G085500.01 class=Sequence position=Chr07:7200740..7201906 (+ strand)
ATTTGTCTCT CTCTGCTGGT GGTGTGCACT GACATGTATC TCTATTCATA GAACATTATT CTAAGCTCAG TGTTATAAAT
CCCTCCAGAG AAGAAGTCTC TCGCAATCTG AAAGCAAAAC TCTCTCTCTA TCTCTCCTGA TGGAGCATTG TCTGAATCCT
TCTATGGGAA AAGCAGTGTC TGGAAGTGGC AATGAGGAAA GCGGGTGGAC TTCTTACTTG GAAGATTTTT CTAAGGGCAT
GGAGGAACAA AGTTACTGTT CCAGCTTGGG TGGCTCCTCT TTGGTCTCAG ATGCTGCTTC TTCTGCTGCA TGGAAACTCT
CACATCACAA TCACCTTCTG TCATACCCTT CTGTTAGAGT TACGGACTCA TCTAATAATA TCTCTAAGAA ACTTCGTTTC
AAGAAAACAA GAACCCAGCA GATATCAGAT GATGATCCTT TGGAAGACAC TGCCAGCTCC CCTGTCAATA GTCCCAAGGT
ACATCATCTG CAATATCATA TCATCTCTTT TTCTTTAAGT TCAATTTACA GTATATAATT GGTGTAAATT GTTTTTTCTT
TAACATTTTT TTATCATGTA ACTTTCCATC TCTTACAATA GGTAGGGGAC TTGAAGATTT CCAGCAAGAT TGACGATGAT
CAACTTGATG GTTCTACTTC TAGGGTAACC CTGCTAAATT TATGATGTTT GTGTAAGAAT GGAAGAAATA GTAAATATTA
CTTTTAAGTA CTTTTCTAAC CAAGTTATGT AGCTTATGAT GACGATGATG ATTGTGTAGG GTAAGGGTTT TCACTCAGAG
CATTACCCAA ACCTGCTGCA GGCTGATGAG TGTGACATGA ACTTCAATGA AAACAATGTT GAGTGCACCG CAGACTTGAA
GAAAAGGGGT CTATGCCTTG TTCCTTGGTC CATGTTGGTT AATTATTATG GGTGAATGCT ACTTTTGTCT ACTTTGTGTT
CTTCTATGTA GCTTGACTTC TCAGGTCACG TTGCTGTTAA CATAACATGA TCAGTGACAG TAAACCCCTG TATTATACCA
ATCATTGTTA ACATGATCAT AACCTGAGAC CATAATTTAT GTTTTGCTTG TTTCTTCATG AACACAGAAA CCAAGATCAT
GTTTGTGACA TTCTTCAAGG GAAGTAAGTA TATATATGTT CTCAAAA

>Vigan.07G085500.01
ATTTGTCTCT CTCTGCTGGT GGTGTGCACT GACATGTATC TCTATTCATA GAACATTATT CTAAGCTCAG TGTTATAAAT
CCCTCCAGAG AAGAAGTCTC TCGCAATCTG AAAGCAAAAC TCTCTCTCTA TCTCTCCTGA TGGAGCATTG TCTGAATCCT
TCTATGGGAA AAGCAGTGTC TGGAAGTGGC AATGAGGAAA GCGGGTGGAC TTCTTACTTG GAAGATTTTT CTAAGGGCAT
GGAGGAACAA AGTTACTGTT CCAGCTTGGG TGGCTCCTCT TTGGTCTCAG ATGCTGCTTC TTCTGCTGCA TGGAAACTCT
CACATCACAA TCACCTTCTG TCATACCCTT CTGTTAGAGT TACGGACTCA TCTAATAATA TCTCTAAGAA ACTTCGTTTC
AAGAAAACAA GAACCCAGCA GATATCAGAT GATGATCCTT TGGAAGACAC TGCCAGCTCC CCTGTCAATA GTCCCAAGGT
AGGGGACTTG AAGATTTCCA GCAAGATTGA CGATGATCAA CTTGATGGTT CTACTTCTAG GGGTAAGGGT TTTCACTCAG
AGCATTACCC AAACCTGCTG CAGGCTGATG AGTGTGACAT GAACTTCAAT GAAAACAATG TTGAGTGCAC CGCAGACTTG
AAGAAAAGGG GTCTATGCCT TGTTCCTTGG TCCATGTTGG TTAATTATTA TGGGTGAATG CTACTTTTGT CTACTTTGTG
TTCTTCTATG TAGCTTGACT TCTCAGGTCA CGTTGCTGTT AACATAACAT GATCAGTGAC AGTAAACCCC TGTATTATAC
CAATCATTGT TAACATGATC ATAACCTGAG ACCATAATTT ATGTTTTGCT TGTTTCTTCA TGAACACAGA AACCAAGATC
ATGTTTGTGA CATTCTTCAA GGGAAGTAAG TATATATATG TTCTCAAAA

>Vigan.07G085500.01
ATGGAGCATT GTCTGAATCC TTCTATGGGA AAAGCAGTGT CTGGAAGTGG CAATGAGGAA AGCGGGTGGA CTTCTTACTT
GGAAGATTTT TCTAAGGGCA TGGAGGAACA AAGTTACTGT TCCAGCTTGG GTGGCTCCTC TTTGGTCTCA GATGCTGCTT
CTTCTGCTGC ATGGAAACTC TCACATCACA ATCACCTTCT GTCATACCCT TCTGTTAGAG TTACGGACTC ATCTAATAAT
ATCTCTAAGA AACTTCGTTT CAAGAAAACA AGAACCCAGC AGATATCAGA TGATGATCCT TTGGAAGACA CTGCCAGCTC
CCCTGTCAAT AGTCCCAAGG TAGGGGACTT GAAGATTTCC AGCAAGATTG ACGATGATCA ACTTGATGGT TCTACTTCTA
GGGGTAAGGG TTTTCACTCA GAGCATTACC CAAACCTGCT GCAGGCTGAT GAGTGTGACA TGAACTTCAA TGAAAACAAT
GTTGAGTGCA CCGCAGACTT GAAGAAAAGG GGTCTATGCC TTGTTCCTTG GTCCATGTTG GTTAATTATT ATGGGTGA

>Vigan.07G085500.01
MEHCLNPSMG KAVSGSGNEE SGWTSYLEDF SKGMEEQSYC SSLGGSSLVS DAASSAAWKL SHHNHLLSYP SVRVTDSSNN
ISKKLRFKKT RTQQISDDDP LEDTASSPVN SPKVGDLKIS SKIDDDQLDG STSRGKGFHS EHYPNLLQAD ECDMNFNENN
VECTADLKKR GLCLVPWSML VNYYG*