GBrowse Details

Vigan.07G065600.01

Basic Information:
Name: Vigan.07G065600.01
Multiple alignment
Variant Information
Position: Chr07:5017590..5022050 (- strand)
Length: 4461
Functional Information:
Description: Similar to Uncharacterized protein. [I1LTM3, Glycine max]
GO: Molecular Function: nucleotide binding (GO:0000166)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: ATPase activity (GO:0016887)
Molecular Function: nucleoside-triphosphatase activity (GO:0017111)
InterPro: ABC transporter-like (IPR003439)
AAA+ ATPase domain (IPR003593)
ABC transporter, conserved site (IPR017871)
P-loop containing nucleoside triphosphate hydrolase (IPR027417)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:50.79,95.06,21.82,21.87,12.95,18.67,6.07,19.39
Arabidopsis thaliana homolog: AT5G60790.1
Automatic updates:
Name: NM_001360255 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max ABC transporter family protein (LOC100785099), transcript variant 1, mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001360256 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max ABC transporter family protein (LOC100785099), transcript variant 2, mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:5017590..5017966 (- strand)
Length: 377
Type: three_prime_UTR
Position: Chr07:5017967..5019024 (- strand)
Length: 1058
Type: CDS
Position: Chr07:5019692..5019926 (- strand)
Length: 235
Type: CDS
Position: Chr07:5020019..5020229 (- strand)
Length: 211
Type: CDS
Position: Chr07:5020328..5020401 (- strand)
Length: 74
Type: CDS
Position: Chr07:5021498..5021707 (- strand)
Length: 210
Type: CDS
Position: Chr07:5021708..5022050 (- strand)
Length: 343
Type: five_prime_UTR

>Vigan.07G065600.01 class=Sequence position=Chr07:5017590..5022050 (- strand)
CGAGGATATA TTATTTGCAA GCAAAGGGTT AAGGCAAGTC CTTCCGGAGG GGACACGTGG AAGCGCACAC TTCTATACGT
ACCAAACCTC ACCTCCTACT CCTACTTCTT CCCCTGCACC CGAAGCTTTG AACCCTAAGC CTTCGCTTCA TCAGAATTTT
ACACTTTCAC GGTATACCAT CAATCCAACG GAGGACTTTG GATCTATCGT CTTCTGGCTC TTTCATCAAA GGTTTGCATT
TCCTTCCTCT GATTTTCGCC TTCGTATTCA TGCATAAATG TTTTCTTTTT TCTCTTTCGA AGTTCCTAGT TGATCGTTGC
TATTCGGAGA TTAGATATTG AAGATGGTGT CTGACGCAAG CAAGAAGAAG GCTGCACAGA AGAAGGCGGC GGCGGCGGCC
AAGAGAGGTG GCAAAGCGGT AACTGCTTCT TCCAAAACTT CGACCTCCGA GAAGCCAGCC GACAAGCTCG CCGACGGAAT
TGGGGATATT CAGATTTCCG ATCGAACCTG CACCGGCGTC CTCTGCTCTC ATCCTCTTTC TAGGGATATT AGGGTGAGTA
CAGTGTTACA CGTCCACCGG TTGGATACTC TGTTTTGTTG TTAACTTTGT TGATTACTAT CATAATGTGG AGTTTGAGTT
TGTGCATTTG GTGTTTCAGT TCTGTTGATT GAGGCTGAGT TTAGAATAAT TTGTGACGTT CTTCTTTTGA CTGTTGAGGA
AACCCGTTGA TTTAGATAAT GTAACTCTCG GTTGAAACGG TTAAATGTTC AAGAGTCTGG AACCAAGTAT CGGGTTTCTA
AATAATTCAA TGATTTATTT CCTGTTTTCT ATTAGAGGAT ACTAATACAT TTCCTTGCAC CTAAAGTTCT TGCGTAGTTA
CCTTGATGCC CTCAGTTACC TAAATACCTT GGTGCCCACG CATTTCGCTC CATGTAATAT ATTGATGATA TTTGTCTTAA
GTTATGCTGT TATGGATGGC AAAGATAACA TCCAATCATC GTAGTTTAGA TTTAACATTT TTTCAATTCT CTGGAGTCTC
AGTCATCAAT TGTTTTTTGC ACAATGTTTC CCTTTGGCTT TTAAGAAAAA ATGCCTTAAT ATTTATGATT GAAAGTTCTC
AGAAAGTGGG TTTTGGCCTA AGTCAACCCT ACAACACTAA TCTCCTTGTG AAAAACTTTT ACCTGCATAT ATATTGTAAT
TTGGTCATAT CTGTTGGTGA TGTACAATCT CATACAAAAC CATTCTGCCT TACTTTTTTG TACGCGTATA CTTCATTCTT
CCCTAGAAAT AGAAGAGCGG TAGGAGATAA TCAATGCAAA ACTTTAATTA TTAATACATG TTTTCTATAC CTCCAATTGA
GTTCTAAAAT GTAGTAGACA TTCCCAGTTT AGTGGGTCTT TTGACTTTTT TTTTCTTGCA TGAGTGCCTA GCCAAACAAC
TGAGTTGGTA GCATTGGTAT ACTACCATGT TGCCTTGGTC AAGAACTTGG TTCTCATTCA TGTAAGAAAA CACTCTCCAA
TAACGAATTT TTACAGGAAG GTTAACACTG TAATCTTATG TGCTAAAATA TTTGTGCCTT AGGTGTAGGT AGTTGCTTAC
ACCTTTACAA TGATCATTAT TGATTCACAT ATTTATGCTG TAATTACAGA TAGAATCTCT CTCAGTTACT TTCCATGGAC
ATGATTTGAT AGTTGACTCT GAATTAGAGC TAAATTATGG AAGGTATGTC ATCCGTATAA TTTTTTTCTG CTTTTTGTTA
GGATGCTGTT ATTCACAACT AATATTTTCA GTGTTTATGC TTACCGTATA TTCCTTTTCA GACGTTATGG TTTGCTCGGA
TTAAATGGTT GTGGAAAATC TACCCTCCTT ACGGCAATAG GTTGTCGAGA GCTACCTATT CCAGATCACA TGGATATTTA
TCACCTTACC AGAGAAATTG AAGCCTCTGA CATGTCTGCA TTGGAGGCTG TCATAAGCTG TGATGAGGAA AGGTTGAAAT
TGGAGAAAGA AGCTGAAGCT TTGGCAGCTC AGGTATGTTT AGTAGTATCA AATCTGTTTG CTCCACATTT TGTGTTTTCG
GATCTCTGGC TCACTCACTT AATTGTTGGT GGTCTTGGGT CCAGGATGAT GGGGGTGGTG AAACACTTGA ACGTGTTTAT
GAACGATTGG AAGCCTTAGA TGCATCAACT GCAGAAAAGC GTGCTGCTGA AATTTTATTT GGTCTTGGTT TCAACAAGCA
GATGCAGGCA AAGAAGACCC GTGATTTTTC TGGTGGATGG AGAATGAGGA TAGCTTTAGC TCGCGCTTTA TTTATGAACC
CGACCATTCT TTTACTTGAT GAACCAACCA ATCATCTCGG TATCCCTCCT TCCTTGAAAA ATGGTTTTTT TTGTGGCTGG
TGTGATAATT CTCTCTGCTG CATCATTTGT GATTTAAAGA GGAAGGGCCT TGCAGATTCT TTATCTATTT TATAAATTAT
GTCTATCAAA TAGTAGCCCT GAATTTGTTG AAGCCTCCTG GTTTACCCAT GGGTAGGCCT CTGAGTATAG TGTTCAGAGC
AATTTTCTTT GGTGCCTACT TTAGTGTATA GAAAAAGGAT TGCCGTAGCA TGATTGCTTC AGGGTAAGCT AATAGGTCAT
CAGATACTTT ATATCAACAT GGTTGATTTT GTGAATGTCA GATCCATTTG TTTTCACTCT TAAATGTCAA TCAAATTTCA
TTGATCTTTC TTAAATTCGA ATTACATTTT ACATTTTACT TGAGAAATTG TCAACCCTTT GCTTTCCATT ATCATTTTAT
TATGGTGGTT GTAATTCTGC TAATGCAAAT GATATAATAC AATCTTAACT ACATCCATCA TTGATGTTAT TTGTTATATT
TTCAAAGTAA ATTAAATTTA TTTGTTTTCT GTGTATTAGC CTGAGTTAGA TGTTCTTGCT CTTGATTTAG TTACATCTGT
CAGTAAGTTT CACCTTTGGT CCTGGAATAA TTGCTGATTC ATAGGTTCTT AAAAATATAT TTGCAGATTT GGAGGCTTGT
GTGTGGCTAG AAGAGAATTT GAAAAGGTTT GACCGCATTC TGGTTGTGGT TTCACACTCT CAGGATTTCC TTAATGGTGT
GTGCACAAAT ATCATCCACA TGCAAAACAA GAAGCTGAAG CTCTATACTG GGAATTATGA CCAATATGTT CAGACACGTG
CTGAGCTTGA AGAGAATCAG ATGAAGCAGT ACAAATGGGA GCAGGAGCAG ATTTCCTCCA TGAAGGAATA TATAGCTCGA
TTTGGTCATG GATCAGCCAA ACTTGCACGC CAAGCCCAGA GTAAAGAGAA AACTCTAGCA AAAATGGAGC GGGGTGGACT
CACAGAGAAG GTGGTAAGAG ACAAAATTTT GGTATTCCGC TTTGTTGACG TGGGAAAACT TCCACCCCCT GTCCTCCAAT
TTGTTGAGGT GACATTTGGT TACACTACTG ATAATCTGAT ATACAAGAAC CTTGACTTTG GGGTTGATTT AGACTCTAGG
ATTGCTCTGG TTGGACCCAA TGGTGCTGGG AAGAGTACGT TACTGAAGCT AATGACTGGC GATCTGGTAC CTGTGGATGG
CATGGTTCGA CGGCACAATC ACCTTCGAAT TGCACAATTT CACCAGCACT TGGCTGAAAA GCTAGACTTG GAATTGTCTG
CTCTACAGTT TATGATAAAA GAATACCCTG GAAATGAGGA GGAGAGGATG AGAGCAGCAA TTGGTAAATT TGGACTGTCG
GGTAAAGCGC AGGTGATGCC GATGAAGAAT TTATCTGACG GGCAGAGGAG CCGCGTGATA TTCGCATGGT TAGCTTATAG
ACAGCCTCAC TTGCTACTTC TGGATGAGCC AACTAACCAT TTAGATATTG AAACAATTGA CTCATTGGCT GAGGCACTGA
ATGAATGGGA CGGTGGCATG GTGCTTGTTA GTCATGATTT TAGGCTCATA AATCAAGTGG CCCACGAGAT ATGGGTGTGC
GCTGATCAAG CTGTGACCAG ATGGGAAGGT GACATCATGG ACTTTAAGGA GCACTTAAGA TCAAAGGCGG GTTTATCTGA
CTGAACTGAA CAAAATTGTT GATATCACTA CTGTCTAATT ACGTGTTTAT ATTACAACCT GAGGTTTGAG ATAGTTTATG
GTTCAGAAAT CATGGATGCT GACCACCATC ATAGGACGCT ACACCTACTA CTACATATTT CTACTAGTGC GCGGCTTATG
TTATGAATGG TATGTTCTGT CCTGGGTCTA TGTCATTCAT CATTTATGCC ACTACTTTCC CCCAACTTCC TCCTAATAAT
TCTTTACCTC CCAATTCCAT AGCAGCCATA AACGTGTTTC ATATACCTCT TCTCATTATG TACGCCAGTA ACTTCATACC
TTTGGATAAG CTGATTATTT ATTTAATAAC AAATTATTAT ATAAAACTAT ATATCTATAA G

>Vigan.07G065600.01
CGAGGATATA TTATTTGCAA GCAAAGGGTT AAGGCAAGTC CTTCCGGAGG GGACACGTGG AAGCGCACAC TTCTATACGT
ACCAAACCTC ACCTCCTACT CCTACTTCTT CCCCTGCACC CGAAGCTTTG AACCCTAAGC CTTCGCTTCA TCAGAATTTT
ACACTTTCAC GGTATACCAT CAATCCAACG GAGGACTTTG GATCTATCGT CTTCTGGCTC TTTCATCAAA GGTTTGCATT
TCCTTCCTCT GATTTTCGCC TTCGTATTCA TGCATAAATG TTTTCTTTTT TCTCTTTCGA AGTTCCTAGT TGATCGTTGC
TATTCGGAGA TTAGATATTG AAGATGGTGT CTGACGCAAG CAAGAAGAAG GCTGCACAGA AGAAGGCGGC GGCGGCGGCC
AAGAGAGGTG GCAAAGCGGT AACTGCTTCT TCCAAAACTT CGACCTCCGA GAAGCCAGCC GACAAGCTCG CCGACGGAAT
TGGGGATATT CAGATTTCCG ATCGAACCTG CACCGGCGTC CTCTGCTCTC ATCCTCTTTC TAGGGATATT AGGATAGAAT
CTCTCTCAGT TACTTTCCAT GGACATGATT TGATAGTTGA CTCTGAATTA GAGCTAAATT ATGGAAGACG TTATGGTTTG
CTCGGATTAA ATGGTTGTGG AAAATCTACC CTCCTTACGG CAATAGGTTG TCGAGAGCTA CCTATTCCAG ATCACATGGA
TATTTATCAC CTTACCAGAG AAATTGAAGC CTCTGACATG TCTGCATTGG AGGCTGTCAT AAGCTGTGAT GAGGAAAGGT
TGAAATTGGA GAAAGAAGCT GAAGCTTTGG CAGCTCAGGA TGATGGGGGT GGTGAAACAC TTGAACGTGT TTATGAACGA
TTGGAAGCCT TAGATGCATC AACTGCAGAA AAGCGTGCTG CTGAAATTTT ATTTGGTCTT GGTTTCAACA AGCAGATGCA
GGCAAAGAAG ACCCGTGATT TTTCTGGTGG ATGGAGAATG AGGATAGCTT TAGCTCGCGC TTTATTTATG AACCCGACCA
TTCTTTTACT TGATGAACCA ACCAATCATC TCGATTTGGA GGCTTGTGTG TGGCTAGAAG AGAATTTGAA AAGGTTTGAC
CGCATTCTGG TTGTGGTTTC ACACTCTCAG GATTTCCTTA ATGGTGTGTG CACAAATATC ATCCACATGC AAAACAAGAA
GCTGAAGCTC TATACTGGGA ATTATGACCA ATATGTTCAG ACACGTGCTG AGCTTGAAGA GAATCAGATG AAGCAGTACA
AATGGGAGCA GGAGCAGATT TCCTCCATGA AGGAATATAT AGCTCGATTT GGTCATGGAT CAGCCAAACT TGCACGCCAA
GCCCAGAGTA AAGAGAAAAC TCTAGCAAAA ATGGAGCGGG GTGGACTCAC AGAGAAGGTG GTAAGAGACA AAATTTTGGT
ATTCCGCTTT GTTGACGTGG GAAAACTTCC ACCCCCTGTC CTCCAATTTG TTGAGGTGAC ATTTGGTTAC ACTACTGATA
ATCTGATATA CAAGAACCTT GACTTTGGGG TTGATTTAGA CTCTAGGATT GCTCTGGTTG GACCCAATGG TGCTGGGAAG
AGTACGTTAC TGAAGCTAAT GACTGGCGAT CTGGTACCTG TGGATGGCAT GGTTCGACGG CACAATCACC TTCGAATTGC
ACAATTTCAC CAGCACTTGG CTGAAAAGCT AGACTTGGAA TTGTCTGCTC TACAGTTTAT GATAAAAGAA TACCCTGGAA
ATGAGGAGGA GAGGATGAGA GCAGCAATTG GTAAATTTGG ACTGTCGGGT AAAGCGCAGG TGATGCCGAT GAAGAATTTA
TCTGACGGGC AGAGGAGCCG CGTGATATTC GCATGGTTAG CTTATAGACA GCCTCACTTG CTACTTCTGG ATGAGCCAAC
TAACCATTTA GATATTGAAA CAATTGACTC ATTGGCTGAG GCACTGAATG AATGGGACGG TGGCATGGTG CTTGTTAGTC
ATGATTTTAG GCTCATAAAT CAAGTGGCCC ACGAGATATG GGTGTGCGCT GATCAAGCTG TGACCAGATG GGAAGGTGAC
ATCATGGACT TTAAGGAGCA CTTAAGATCA AAGGCGGGTT TATCTGACTG AACTGAACAA AATTGTTGAT ATCACTACTG
TCTAATTACG TGTTTATATT ACAACCTGAG GTTTGAGATA GTTTATGGTT CAGAAATCAT GGATGCTGAC CACCATCATA
GGACGCTACA CCTACTACTA CATATTTCTA CTAGTGCGCG GCTTATGTTA TGAATGGTAT GTTCTGTCCT GGGTCTATGT
CATTCATCAT TTATGCCACT ACTTTCCCCC AACTTCCTCC TAATAATTCT TTACCTCCCA ATTCCATAGC AGCCATAAAC
GTGTTTCATA TACCTCTTCT CATTATGTAC GCCAGTAACT TCATACCTTT GGATAAGCTG ATTATTTATT TAATAACAAA
TTATTATATA AAACTATATA TCTATAAG

>Vigan.07G065600.01
ATGGTGTCTG ACGCAAGCAA GAAGAAGGCT GCACAGAAGA AGGCGGCGGC GGCGGCCAAG AGAGGTGGCA AAGCGGTAAC
TGCTTCTTCC AAAACTTCGA CCTCCGAGAA GCCAGCCGAC AAGCTCGCCG ACGGAATTGG GGATATTCAG ATTTCCGATC
GAACCTGCAC CGGCGTCCTC TGCTCTCATC CTCTTTCTAG GGATATTAGG ATAGAATCTC TCTCAGTTAC TTTCCATGGA
CATGATTTGA TAGTTGACTC TGAATTAGAG CTAAATTATG GAAGACGTTA TGGTTTGCTC GGATTAAATG GTTGTGGAAA
ATCTACCCTC CTTACGGCAA TAGGTTGTCG AGAGCTACCT ATTCCAGATC ACATGGATAT TTATCACCTT ACCAGAGAAA
TTGAAGCCTC TGACATGTCT GCATTGGAGG CTGTCATAAG CTGTGATGAG GAAAGGTTGA AATTGGAGAA AGAAGCTGAA
GCTTTGGCAG CTCAGGATGA TGGGGGTGGT GAAACACTTG AACGTGTTTA TGAACGATTG GAAGCCTTAG ATGCATCAAC
TGCAGAAAAG CGTGCTGCTG AAATTTTATT TGGTCTTGGT TTCAACAAGC AGATGCAGGC AAAGAAGACC CGTGATTTTT
CTGGTGGATG GAGAATGAGG ATAGCTTTAG CTCGCGCTTT ATTTATGAAC CCGACCATTC TTTTACTTGA TGAACCAACC
AATCATCTCG ATTTGGAGGC TTGTGTGTGG CTAGAAGAGA ATTTGAAAAG GTTTGACCGC ATTCTGGTTG TGGTTTCACA
CTCTCAGGAT TTCCTTAATG GTGTGTGCAC AAATATCATC CACATGCAAA ACAAGAAGCT GAAGCTCTAT ACTGGGAATT
ATGACCAATA TGTTCAGACA CGTGCTGAGC TTGAAGAGAA TCAGATGAAG CAGTACAAAT GGGAGCAGGA GCAGATTTCC
TCCATGAAGG AATATATAGC TCGATTTGGT CATGGATCAG CCAAACTTGC ACGCCAAGCC CAGAGTAAAG AGAAAACTCT
AGCAAAAATG GAGCGGGGTG GACTCACAGA GAAGGTGGTA AGAGACAAAA TTTTGGTATT CCGCTTTGTT GACGTGGGAA
AACTTCCACC CCCTGTCCTC CAATTTGTTG AGGTGACATT TGGTTACACT ACTGATAATC TGATATACAA GAACCTTGAC
TTTGGGGTTG ATTTAGACTC TAGGATTGCT CTGGTTGGAC CCAATGGTGC TGGGAAGAGT ACGTTACTGA AGCTAATGAC
TGGCGATCTG GTACCTGTGG ATGGCATGGT TCGACGGCAC AATCACCTTC GAATTGCACA ATTTCACCAG CACTTGGCTG
AAAAGCTAGA CTTGGAATTG TCTGCTCTAC AGTTTATGAT AAAAGAATAC CCTGGAAATG AGGAGGAGAG GATGAGAGCA
GCAATTGGTA AATTTGGACT GTCGGGTAAA GCGCAGGTGA TGCCGATGAA GAATTTATCT GACGGGCAGA GGAGCCGCGT
GATATTCGCA TGGTTAGCTT ATAGACAGCC TCACTTGCTA CTTCTGGATG AGCCAACTAA CCATTTAGAT ATTGAAACAA
TTGACTCATT GGCTGAGGCA CTGAATGAAT GGGACGGTGG CATGGTGCTT GTTAGTCATG ATTTTAGGCT CATAAATCAA
GTGGCCCACG AGATATGGGT GTGCGCTGAT CAAGCTGTGA CCAGATGGGA AGGTGACATC ATGGACTTTA AGGAGCACTT
AAGATCAAAG GCGGGTTTAT CTGACTGA

>Vigan.07G065600.01
MVSDASKKKA AQKKAAAAAK RGGKAVTASS KTSTSEKPAD KLADGIGDIQ ISDRTCTGVL CSHPLSRDIR IESLSVTFHG
HDLIVDSELE LNYGRRYGLL GLNGCGKSTL LTAIGCRELP IPDHMDIYHL TREIEASDMS ALEAVISCDE ERLKLEKEAE
ALAAQDDGGG ETLERVYERL EALDASTAEK RAAEILFGLG FNKQMQAKKT RDFSGGWRMR IALARALFMN PTILLLDEPT
NHLDLEACVW LEENLKRFDR ILVVVSHSQD FLNGVCTNII HMQNKKLKLY TGNYDQYVQT RAELEENQMK QYKWEQEQIS
SMKEYIARFG HGSAKLARQA QSKEKTLAKM ERGGLTEKVV RDKILVFRFV DVGKLPPPVL QFVEVTFGYT TDNLIYKNLD
FGVDLDSRIA LVGPNGAGKS TLLKLMTGDL VPVDGMVRRH NHLRIAQFHQ HLAEKLDLEL SALQFMIKEY PGNEEERMRA
AIGKFGLSGK AQVMPMKNLS DGQRSRVIFA WLAYRQPHLL LLDEPTNHLD IETIDSLAEA LNEWDGGMVL VSHDFRLINQ
VAHEIWVCAD QAVTRWEGDI MDFKEHLRSK AGLSD*