GBrowse Details

Vigan.07G012300.01

Basic Information:
Name: Vigan.07G012300.01
Multiple alignment
Variant Information
Position: Chr07:822042..825711 (+ strand)
Length: 3670
Functional Information:
Description: Similar to Uncharacterized protein. [I1MSH9, Glycine max]
GO: Biological Process: signal peptide processing (GO:0006465)
Cellular Component: membrane (GO:0016020)
Molecular Function: peptidase activity (GO:0008233)
InterPro: Peptidase S26B, eukaryotic signal peptidase (IPR001733)
Peptidase S24/S26A/S26B/S26C (IPR015927)
Peptidase S24/S26A/S26B (IPR019759)
Peptidase S24/S26, beta-ribbon domain (IPR028360)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:26.21,34.99,66.83,51.18,72.44,199.23 ,56.62,64.95
Arabidopsis thaliana homolog: AT1G52600.1
Structure :
Position: Chr07:822042..822159 (+ strand)
Length: 118
Type: five_prime_UTR
Position: Chr07:822160..822238 (+ strand)
Length: 79
Type: CDS
Position: Chr07:822803..822915 (+ strand)
Length: 113
Type: CDS
Position: Chr07:823118..823189 (+ strand)
Length: 72
Type: CDS
Position: Chr07:823423..823458 (+ strand)
Length: 36
Type: CDS
Position: Chr07:824201..824246 (+ strand)
Length: 46
Type: CDS
Position: Chr07:824548..824635 (+ strand)
Length: 88
Type: CDS
Position: Chr07:825035..825092 (+ strand)
Length: 58
Type: CDS
Position: Chr07:825307..825357 (+ strand)
Length: 51
Type: CDS
Position: Chr07:825358..825711 (+ strand)
Length: 354
Type: three_prime_UTR

>Vigan.07G012300.01 class=Sequence position=Chr07:822042..825711 (+ strand)
GAAAACAAAA GGAAGAGTTA CGCCTTGATG TTATAGTGAA GTTGGGACTT GGGAGCAGCC ACCATAGACT TGTGCATTCT
GCATTGAAGC GTAGAGAAGA AGAGAAGAAG CAACAGCAAT GGGTTGGATC GGAGAGACTA TGGATTCCAT CAAATCTCTT
CAGATCCGGC AGGTTCTCAC TCAGGCTGTT AGCCTCGGTT CGTTCTTCTT CTCCTCTCTC TCTTTTTCCG TTTCAATTTT
TCATTCATTT TACTCTTATC TTATTTGCCT ACACTCCCAA ACTATTCCAA TTTCAATTTC TCCGATCAAA TTCTTCACTC
CCCACTTTTT TTAGGGTTTT GATCAACTCC GGTTGCCAAT TTTTTCACTG TTAGCGTTTG CAAAGCATTA CGCTAGCATG
GATATCTTCG CTTTTCGCTT GAGAGGTTTA TCTTTAGCGG CTCTCACTCT CACTGTCACA CTCTTTATAG ACGAGGATCA
ATATGATTTA TGGTAATCCG ATTATGCAAA CAACATAGGG TTATTGTGTC CACACCTTAA AACCATTGTG TTTGTCTTCC
GTACTTCTTT TCATTCCTCT ATCCTACTCA AGTGTTTCTA TATGCTTGTG CTGCTGACAG TAATTCAACA TTTGGTTGAT
AACTCTGTAT AGGCTATGCT GTTTTATCAT AAGTACTGTC GACGGTATGG TTTTCTTGGT CTATCCGTAG GATTTTTTAT
TTATTTATTT ATTTACCAAA GTATTTTATG TTTTGACTCA GGCATGATTG TTACGTCTGC GTTGATAATA TGGAAGGCAT
TGATGTGCAT TACTGGCAGT GAATCTCCTG TTGTCGTTGT TCTTTCTGGA AGCATGGAAC CAGGATTCAA GCGGGTGAGT
CAGTCTTGTG CATGAATGCT TAACTGTTTC TGTTGTTGTT TTTGTTCTTT TTCAGTAAAT AGTATTTTTG TGTTTCTTGT
ACACATAATT CGGGATATAT TTCAGTGAGA GCGGAGTTGT GTATATATGC AAACTATTCT TGTCAACATA ATTTTTCCGC
TACTTTGTGG TTTTAACAAA TGCGGCTAAT GTGCAGGGAG ACATCTTATT CCTGCACATG AGTAAAGATC CAATTCGGGC
GGGGGAGATT GTTGTGTTTA ATGTGGATGT AAGTTTTCTC TTCGGTTGTT TCTTTATATT TTGCTTAGCT TATTTGTATT
TATCAGAATC AATCTATAAA AAAATTATAT CTGAACCATT TGTATGACTT TACTCAGAAT AATAGTTTGT TTATTCTTGT
TAATTATATT CATTTTTTGA TTCTCTGTTT TCTGCTCACT ACTTTCCTAT CATTATTGAC GTAAATTAGA TTATTTATTG
ACACGTATTT TTTGTATTTA GGGACGTGAG ATTCCAATTG TTCATCGTGT AATTAAGGTA AGCACCTCTG GTACACCTAA
ATTGTCTTTT AGATGGAAAG TTAGGGAAAA TCGGTTCACA GCATTGTATG GGGGATCCAC TTCATAAGTG TGTTGCTGAA
GTGGTGCCTA TTCAAACTGA AACTACATAA AGTACATAAA CTGTTCTTAT TTAGTTTAAT GTCAATGCAA ACCAAATCCT
AACCTGGGTT TTATCAAAAT ATGTGCCATC AGTTTTTGGT TCCTAATTTA TCTTTATCTT AATCTTGAAG GACAAGGAAC
ATCAATCTAG GGTGCCATTA GAATTTTCCT CCTTCACTCT CTGCTTCTCC TTTGTTGGTT GAACTACTTA GTTATTTTCG
TTGACAACAT TGTGAAAACT GGAAAGGTTC CTGAATCTCA GGGTAATGGA TATGAATATG ATAGATTACT TATCGTTCCT
TGCAAAAGGA AACATCCTTG CTTAAAGTAT GTTTATCAAT TTATATTCAC TGACAACACT AAAAATGGAG AGCATCAAGA
ATATCTGGAT AATTCATAAG ATTGATTAGT TGGATTTATC CTTCTTTCCA GCAATAAACT TGAATCCCTC AAGTGCACAT
ACATGCATAC ATGCACGAAC ACTTAAATAT TCACTTGTGT AAATTCTATA TGTTTTCTAC ATTACACATT CTCTGGTTTA
GAATTCTCTA TGCATTCTGA AATATTGTGA TGATTATGGT TGCCATATTT TAGAGTCTCA ATACTTCATC ATTCTGTAGG
TACACGAAAG GGAGGATACT GGGGAGGTTG ATGTTCTCAC AAAAGGTAAT GCCTAGTTCA TGACTTGATA ACTTCATGGA
AATGTTGGCT ATATTTGATT TTTTGGTCCT CCATTTTAGA GAAATACTAG TGATGCTTGC AACACAAATT TTCTAACATA
TTATTATTGA ACGCATTTAC CAATAAAAGA AATGGACCCA TTCTCTATTT AGTTAGAAAT GCATGAAGTG TTTTAGTTCA
GTGTATTGTT AGCATCTCTC TTGTACGACA CGTTTTAGTT ATCCATTTTA GTTAGTGGCT ATGTTAATGT AGTGCTTCCT
TTGATTTATT TTGCTGTCTT TGGCAGGAGA CAACAATTAT GGGGATGACA GGCTATTGTA TGCTCATGGT CAGCTTTGGC
TGCAAAGGCA CCACATAATG GGTAGAGCTG TCGGGTATGG CATTTTTTTA GTTACACTTG CTCCACTTAT TGTAGAACTG
TTTTCTAAAC CTGTTTTGTT ACACCCAGTA CTACCTGTTG TGGCAAGCAC ACAGTTATTT ACAATATTGA GGTTATATGC
TTTAAGTCTT CAACTGTAAT AAGAGAGAGA TGTTTGACAT TAAAGTAGTA GGCATTTTTT GGCAACATGC TAAATGCCAC
TACTAGAGCA TAGTATCTGA CAATGTGCGC AATTTCTAAC ACCCAATGGG CTCTTGAATA TGAGCATCAT GCCAAATGTT
AATCCTACTT TATCCCAAAA TGATACCAAC AGTTTGACAT TTAATAGTAT GAAGCATTTC ATTGGCAAGT AGTTTTCCGG
TACTAAAAAA ATTGCTTGTA TTGTCAATGG CAGGTTCTTA CCTTACGTGG GCTGGGTGAC CATTATTATG ACTGAAAAGC
CTATTATCAA GGTTTGTTTG CTGTGCCAAT CTATTGTGTT CATGTAGCTC GTGTAGGTTG TTGACGGTTC GAAACCTAAT
AGTTTTCTTG TGGTGCTGAT TTATTGCAAA GCAACGGATG ATATTTTACT CTGCAATGCG ATAAAATGAC CATTTTCGAG
ATGCATGACA TATATTTTAA GTTGCATCAA GTATGAAGTA TTCTAAAGCT GTCTCATCTT TGCAGTATAT TCTCATTGGT
GCTTTGGGGT TGCTCGTGAT AACTTCAAAA GATTAAATGA ATATTCCAAA ATCAAACTGC GGCCTAAACT CCGATGGTAG
TATGAGCAGA TGTCATGCTT TTCTTGAAGG TGTCATTTTG TACCATTCAT AGTATGGGGA CTATATAATG TTAAGAATTA
ATGAAAAATA GTTGAATTTT GATATTTACC TTGATGAGTT GGCATCTGAT TGAACTCCAT CGCCTCCTTT ATATTCTATT
TTAGTGCAGT TTAAGATTAA GCCTATAAAT ATGCTGTTTC TTATCCTCAA TGCCACCTGC GGTCTTTGTC CATTAAAAAC
TTGCTTAGTT CTTTGTGAAA AACTTTAGCT TGCCCATGCT TTACTAATCT AATATATAGT TTTATTCAAA 

>Vigan.07G012300.01
GAAAACAAAA GGAAGAGTTA CGCCTTGATG TTATAGTGAA GTTGGGACTT GGGAGCAGCC ACCATAGACT TGTGCATTCT
GCATTGAAGC GTAGAGAAGA AGAGAAGAAG CAACAGCAAT GGGTTGGATC GGAGAGACTA TGGATTCCAT CAAATCTCTT
CAGATCCGGC AGGTTCTCAC TCAGGCTGTT AGCCTCGGCA TGATTGTTAC GTCTGCGTTG ATAATATGGA AGGCATTGAT
GTGCATTACT GGCAGTGAAT CTCCTGTTGT CGTTGTTCTT TCTGGAAGCA TGGAACCAGG ATTCAAGCGG GGAGACATCT
TATTCCTGCA CATGAGTAAA GATCCAATTC GGGCGGGGGA GATTGTTGTG TTTAATGTGG ATGGACGTGA GATTCCAATT
GTTCATCGTG TAATTAAGGT ACACGAAAGG GAGGATACTG GGGAGGTTGA TGTTCTCACA AAAGGAGACA ACAATTATGG
GGATGACAGG CTATTGTATG CTCATGGTCA GCTTTGGCTG CAAAGGCACC ACATAATGGG TAGAGCTGTC GGGTTCTTAC
CTTACGTGGG CTGGGTGACC ATTATTATGA CTGAAAAGCC TATTATCAAG TATATTCTCA TTGGTGCTTT GGGGTTGCTC
GTGATAACTT CAAAAGATTA AATGAATATT CCAAAATCAA ACTGCGGCCT AAACTCCGAT GGTAGTATGA GCAGATGTCA
TGCTTTTCTT GAAGGTGTCA TTTTGTACCA TTCATAGTAT GGGGACTATA TAATGTTAAG AATTAATGAA AAATAGTTGA
ATTTTGATAT TTACCTTGAT GAGTTGGCAT CTGATTGAAC TCCATCGCCT CCTTTATATT CTATTTTAGT GCAGTTTAAG
ATTAAGCCTA TAAATATGCT GTTTCTTATC CTCAATGCCA CCTGCGGTCT TTGTCCATTA AAAACTTGCT TAGTTCTTTG
TGAAAAACTT TAGCTTGCCC ATGCTTTACT AATCTAATAT ATAGTTTTAT TCAAA

>Vigan.07G012300.01
ATGGGTTGGA TCGGAGAGAC TATGGATTCC ATCAAATCTC TTCAGATCCG GCAGGTTCTC ACTCAGGCTG TTAGCCTCGG
CATGATTGTT ACGTCTGCGT TGATAATATG GAAGGCATTG ATGTGCATTA CTGGCAGTGA ATCTCCTGTT GTCGTTGTTC
TTTCTGGAAG CATGGAACCA GGATTCAAGC GGGGAGACAT CTTATTCCTG CACATGAGTA AAGATCCAAT TCGGGCGGGG
GAGATTGTTG TGTTTAATGT GGATGGACGT GAGATTCCAA TTGTTCATCG TGTAATTAAG GTACACGAAA GGGAGGATAC
TGGGGAGGTT GATGTTCTCA CAAAAGGAGA CAACAATTAT GGGGATGACA GGCTATTGTA TGCTCATGGT CAGCTTTGGC
TGCAAAGGCA CCACATAATG GGTAGAGCTG TCGGGTTCTT ACCTTACGTG GGCTGGGTGA CCATTATTAT GACTGAAAAG
CCTATTATCA AGTATATTCT CATTGGTGCT TTGGGGTTGC TCGTGATAAC TTCAAAAGAT TAA

>Vigan.07G012300.01
MGWIGETMDS IKSLQIRQVL TQAVSLGMIV TSALIIWKAL MCITGSESPV VVVLSGSMEP GFKRGDILFL HMSKDPIRAG
EIVVFNVDGR EIPIVHRVIK VHEREDTGEV DVLTKGDNNY GDDRLLYAHG QLWLQRHHIM GRAVGFLPYV GWVTIIMTEK
PIIKYILIGA LGLLVITSKD *