GBrowse Details

Vigan.06G199300.01

Basic Information:
Name: Vigan.06G199300.01
Multiple alignment
Variant Information
Position: Chr06:33552609..33555939 (+ strand)
Length: 3331
Functional Information:
Description: Similar to 70 kDa heat shock cognate protein 1. [Q5QHT4, Vigna radiata]
InterPro: Heat shock protein 70 family (IPR013126)
Heat shock protein 70, conserved site (IPR018181)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:18.68,71.04,430.38,383.05,603.98,154.58,178.91,117.77
Arabidopsis thaliana homolog: AT1G09080.1, AT1G16030.1, AT1G56410.1, AT3G09440.1, AT3G12580.1, AT4G24280.1, AT5G02490.1, AT5G02500.1, AT5G09590.1, AT5G28540.1, AT5G42020.1, AT5G49910.1
Automatic updates:
Name: NM_001317272 NCBI(nuccore)
Organism: Vigna radiata
Description: Vigna radiata heat shock cognate 70 kDa protein 2 (LOC106756126), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001360321 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max heat shock 70 (LOC100816111), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:33552609..33553058 (+ strand)
Length: 450
Type: five_prime_UTR
Position: Chr06:33553059..33553272 (+ strand)
Length: 214
Type: CDS
Position: Chr06:33553846..33555581 (+ strand)
Length: 1736
Type: CDS
Position: Chr06:33555582..33555939 (+ strand)
Length: 358
Type: three_prime_UTR

>Vigan.06G199300.01 class=Sequence position=Chr06:33552609..33555939 (+ strand)
TAAAGATGTT ATTGTCCCAG CCAATAGCGC GGGAGAATCA CAAAGACAAT CTATCCAATA CGTGAAAAAG GCGACGGCGA
CTCGTCAACG GTTATAAGAA TCTTAGTTTA AGCGTGTTTG GATACAACGC GTGCCAAGCC ACCGTGGATT CGAAATCGGA
AAATTCTGGA ACCACCTAGA GGACGTAGGA GATACCCCAC ACACCCCACG CAATACCTCG CTTTTTCCCA ACTCCAATTT
CACTAGTAAA CAAAATATCC AACCGTCCAA AGTTTCTGAT CCAACGGTAC GCAACCAACC GAACCTTCCA GAATTTTAAG
GGGTTCTTTA AAACACACCA CTTGCTTCTT CCTCCCCAAT TCAGTTCAAG AAATTGCCGG AAGTTTTTAA TTCCTTTTTC
TACAATTCGA GTTCTAATTC CGTTAGGGTA AACAGTTGTG AGCAGAAAAT ATGGCCGGTA AAGGCGAGGG TCCTGCGATC
GGAATCGATT TGGGAACCAC CTATTCTTGT GTCGGTGTTT GGCAGCACGA TCGTGTTGAA ATCATAGCCA ATGATCAGGG
TAATAGAACT ACCCCATCCT ACGTGGCTTT CACTGACTCA GAACGGTTGA TCGGCGATGC GGCCAAGAAC CAGGTCGCTA
TGAACCCAAC CAACACCGTT TTCGGTAAGC ACTCTCAAAT CATCCTGTAA TACCTTGCTT ATCCGCAGTT GTCGTCACTT
TAATTGATTT CTTAGTCAAC TTGTCCAGAT TTATGTCGAT CTAGGTCAAG TTCTAATTCT CTCTAATATA ACTGCTGTTA
GTCAGTATTA TTGTCATGAT TCTTTCGTTT TTATTTACAT AAAGAAAATT AAGAGAAGTG AAGTTATGTA GTTATTGTTT
TGTGTTTCTA AGAGTTTACT TCACAAAAAA TAAGCCGTGT AAAAGAATCC TTGGCGATGC AATTGGATTG TTAGTCGATT
TTTGTAGCTG CGTTTTAGCG ATGTAAGGTT TATTAAACAA TCACATAATT TAACTGGTTT GATTTTGCAT GGTTAGTTTG
AAGCACTTAA TTGAACTGTT TAGATTTTGC ATGATAAGTT GAAGCACTTG ATTGAGCTGT TTTGTGTTTC CATGAAAGTT
TTGGTTAAAT GATTACTTGA TTGAATTACC CGTGCAAAAG CGTCCTCAAT TGTCAGACAA TTATTTTTTT TTCTTTTTCG
AATCATCTGC TGATTGTGTT GATTTGTTTT GGCGCAGATG CTAAGCGTTT GATTGGTAGA CGTCTTAGTG ATGCTTCTGT
ACAGAGTGAC ATAAAATTGT GGCCGTTCAA AGTGGTTTCT GGTGCCGGTG ACAAACCTAT GATTGTGGTA AATTACAAGG
GGGAGGAAAA GCAGTTTTCC GCCGAAGAAA TATCTTCCAT GGTTCTAATC AAGATGAAAG AGATTGCGGA GGCCTTTCTC
GGATCCACAG TGAAGAATGC CGTGGTTACT GTCCCCGCGT ACTTCAATGA CTCACAGCGT CAAGCTACCA AGGACGCTGG
GGTCATTTCA GGGCTCAATG TTATGCGTAT TATCAATGAA CCTACTGCGG CTGCCATTGC TTACGGGCTT GACAAAAAGG
CCACTACCTC TGGGGAGAAG AACGTTCTCA TATTTGACCT TGGTGGTGGG ACTTTCGATG TGTCTCTTCT CACCATTGAG
GAAGGAATTT TCGAGGTGAA AGCCACCGCT GGAGATACTC ACTTGGGAGG TGAAGATTTT GATAACAGAA TGGTGAACCA
TTTTGTTCAG GAGTTCAAGA GGAAGAACAA GAAGGATATT AGTGGAAATG CGCGAGCATT GAGGAGGTTG AGAACTGCAT
GTGAGAGGGC GAAGAGGACT CTTTCTTCCA CCGCTCAAAC CACCATCGAG ATTGATTCCT TGTATGAGGG CATTGACTTC
TACACAACCA TCACCCGTGC CAGATTTGAA GAGCTGAACA TGGATCTCTT CAGGAAATGC ATGGAGCCCG TGGAGAAGTG
TTTGCGAGAT GCGAAGATGG ATAAGAGCAC AGTCCATGAT GTTGTTCTTG TCGGTGGTTC CACCAGGATA CCCAAGGTTC
AACAGTTATT GCAGGATTTC TTCAATGGGA AGGAGCTCTG CAAGAGCATC AACCCCGATG AAGCTGTTGC GTATGGTGCT
GCAGTGCAGG CTGCTATTCT CAGTGGCGAG GGTAATGAGA AAGTTCAGGA TCTTCTCCTG TTGGATGTTA GCCCTCTCTC
CCTTGGTTTG GAGACAGCAG GAGGTGTCAT GACTGTGTTG ATTCCCAGAA ACACAACCAT TCCCACCAAG AAGGAGCAGG
TGTTTTCAAC ATACTCCGAC AACCAGCCCG GTGTGTTGAT TCAGGTCTAT GAAGGTGAAC GTACGAGGAC TCGCGATAAC
AATTTGCTCG GAAAATTCGA GCTCTCTGGA ATTCCTCCTG CCCCGAGAGG TGTTCCCCAG ATCAATGTCT GCTTTGATAT
GGATGCCAAT GGTATATTGA ACGTGTCTGC AGAGGACAAG ACCACTGGAC AAAAGAATAA GATAACAATT ACCAACGACA
AGGGTAGGCT TTCCAAAGAA GAGATTGAAA AGATGGTGCA GGAAGCTGAG AAATACAAGG CTGAGGACGA GGAGCATAAG
AAAAAGGTGG AAGCCAAAAA TTCTTTGGAA AATTATGCCT ATAACATGAG GAACACAATT AAAGATGAAA AGATTGCTTC
CAAGTTGCCT GCTGATGATA AGAAGAAAAT AGAAGATGCT ATTGATCAAG CCATTCAATG GCTGGATGGG AACCAACTTG
GTGAGGCTGA TGAATTTGAG GACAAGATGA AGGAGTTGGA GAGCATATGC AATCCCATCA TCGCTAAGAT GTACCAAGGT
GCTGGTGGTG ATGCTGGTGC AGGCATGGAT GAGGATGGTC CTGCTCCTGC CAGTGGAAGC GGTGCTGGAC CCAAAATTGA
GGAAGTCGAT TAAGCAGAAC AATTGTCGTG GATTGTTCTT GATTTTGCCA AGACCCTTAG ATAATGATAT CTGTTGTCAG
ACTGTTTTAA TTGGAATTAT TTACTTTACT TTTCATTTTT TTTTCATTAA TGTACTTTTT CCTGTTTTAA TGTACACAAT
GATATGAAGT TTGCTCATTT ATAGTGTAGT TTTTCAATTA TGATTGCTGG CCACACGAAA CTGAGAACAT TAAGTGGTTG
AAAAATGGCT TGCAGCTGTG ATTATTTGAC TTGGAAGCGT ATACTAGCAC TGTATCAGTC CATAAAAAAA CTAGCTACTG
TATCAAATAG CAAAACAACC TTTACTTACC TTTTCAAGCT GTTTGTATGA C

>Vigan.06G199300.01
TAAAGATGTT ATTGTCCCAG CCAATAGCGC GGGAGAATCA CAAAGACAAT CTATCCAATA CGTGAAAAAG GCGACGGCGA
CTCGTCAACG GTTATAAGAA TCTTAGTTTA AGCGTGTTTG GATACAACGC GTGCCAAGCC ACCGTGGATT CGAAATCGGA
AAATTCTGGA ACCACCTAGA GGACGTAGGA GATACCCCAC ACACCCCACG CAATACCTCG CTTTTTCCCA ACTCCAATTT
CACTAGTAAA CAAAATATCC AACCGTCCAA AGTTTCTGAT CCAACGGTAC GCAACCAACC GAACCTTCCA GAATTTTAAG
GGGTTCTTTA AAACACACCA CTTGCTTCTT CCTCCCCAAT TCAGTTCAAG AAATTGCCGG AAGTTTTTAA TTCCTTTTTC
TACAATTCGA GTTCTAATTC CGTTAGGGTA AACAGTTGTG AGCAGAAAAT ATGGCCGGTA AAGGCGAGGG TCCTGCGATC
GGAATCGATT TGGGAACCAC CTATTCTTGT GTCGGTGTTT GGCAGCACGA TCGTGTTGAA ATCATAGCCA ATGATCAGGG
TAATAGAACT ACCCCATCCT ACGTGGCTTT CACTGACTCA GAACGGTTGA TCGGCGATGC GGCCAAGAAC CAGGTCGCTA
TGAACCCAAC CAACACCGTT TTCGATGCTA AGCGTTTGAT TGGTAGACGT CTTAGTGATG CTTCTGTACA GAGTGACATA
AAATTGTGGC CGTTCAAAGT GGTTTCTGGT GCCGGTGACA AACCTATGAT TGTGGTAAAT TACAAGGGGG AGGAAAAGCA
GTTTTCCGCC GAAGAAATAT CTTCCATGGT TCTAATCAAG ATGAAAGAGA TTGCGGAGGC CTTTCTCGGA TCCACAGTGA
AGAATGCCGT GGTTACTGTC CCCGCGTACT TCAATGACTC ACAGCGTCAA GCTACCAAGG ACGCTGGGGT CATTTCAGGG
CTCAATGTTA TGCGTATTAT CAATGAACCT ACTGCGGCTG CCATTGCTTA CGGGCTTGAC AAAAAGGCCA CTACCTCTGG
GGAGAAGAAC GTTCTCATAT TTGACCTTGG TGGTGGGACT TTCGATGTGT CTCTTCTCAC CATTGAGGAA GGAATTTTCG
AGGTGAAAGC CACCGCTGGA GATACTCACT TGGGAGGTGA AGATTTTGAT AACAGAATGG TGAACCATTT TGTTCAGGAG
TTCAAGAGGA AGAACAAGAA GGATATTAGT GGAAATGCGC GAGCATTGAG GAGGTTGAGA ACTGCATGTG AGAGGGCGAA
GAGGACTCTT TCTTCCACCG CTCAAACCAC CATCGAGATT GATTCCTTGT ATGAGGGCAT TGACTTCTAC ACAACCATCA
CCCGTGCCAG ATTTGAAGAG CTGAACATGG ATCTCTTCAG GAAATGCATG GAGCCCGTGG AGAAGTGTTT GCGAGATGCG
AAGATGGATA AGAGCACAGT CCATGATGTT GTTCTTGTCG GTGGTTCCAC CAGGATACCC AAGGTTCAAC AGTTATTGCA
GGATTTCTTC AATGGGAAGG AGCTCTGCAA GAGCATCAAC CCCGATGAAG CTGTTGCGTA TGGTGCTGCA GTGCAGGCTG
CTATTCTCAG TGGCGAGGGT AATGAGAAAG TTCAGGATCT TCTCCTGTTG GATGTTAGCC CTCTCTCCCT TGGTTTGGAG
ACAGCAGGAG GTGTCATGAC TGTGTTGATT CCCAGAAACA CAACCATTCC CACCAAGAAG GAGCAGGTGT TTTCAACATA
CTCCGACAAC CAGCCCGGTG TGTTGATTCA GGTCTATGAA GGTGAACGTA CGAGGACTCG CGATAACAAT TTGCTCGGAA
AATTCGAGCT CTCTGGAATT CCTCCTGCCC CGAGAGGTGT TCCCCAGATC AATGTCTGCT TTGATATGGA TGCCAATGGT
ATATTGAACG TGTCTGCAGA GGACAAGACC ACTGGACAAA AGAATAAGAT AACAATTACC AACGACAAGG GTAGGCTTTC
CAAAGAAGAG ATTGAAAAGA TGGTGCAGGA AGCTGAGAAA TACAAGGCTG AGGACGAGGA GCATAAGAAA AAGGTGGAAG
CCAAAAATTC TTTGGAAAAT TATGCCTATA ACATGAGGAA CACAATTAAA GATGAAAAGA TTGCTTCCAA GTTGCCTGCT
GATGATAAGA AGAAAATAGA AGATGCTATT GATCAAGCCA TTCAATGGCT GGATGGGAAC CAACTTGGTG AGGCTGATGA
ATTTGAGGAC AAGATGAAGG AGTTGGAGAG CATATGCAAT CCCATCATCG CTAAGATGTA CCAAGGTGCT GGTGGTGATG
CTGGTGCAGG CATGGATGAG GATGGTCCTG CTCCTGCCAG TGGAAGCGGT GCTGGACCCA AAATTGAGGA AGTCGATTAA
GCAGAACAAT TGTCGTGGAT TGTTCTTGAT TTTGCCAAGA CCCTTAGATA ATGATATCTG TTGTCAGACT GTTTTAATTG
GAATTATTTA CTTTACTTTT CATTTTTTTT TCATTAATGT ACTTTTTCCT GTTTTAATGT ACACAATGAT ATGAAGTTTG
CTCATTTATA GTGTAGTTTT TCAATTATGA TTGCTGGCCA CACGAAACTG AGAACATTAA GTGGTTGAAA AATGGCTTGC
AGCTGTGATT ATTTGACTTG GAAGCGTATA CTAGCACTGT ATCAGTCCAT AAAAAAACTA GCTACTGTAT CAAATAGCAA
AACAACCTTT ACTTACCTTT TCAAGCTGTT TGTATGAC

>Vigan.06G199300.01
ATGGCCGGTA AAGGCGAGGG TCCTGCGATC GGAATCGATT TGGGAACCAC CTATTCTTGT GTCGGTGTTT GGCAGCACGA
TCGTGTTGAA ATCATAGCCA ATGATCAGGG TAATAGAACT ACCCCATCCT ACGTGGCTTT CACTGACTCA GAACGGTTGA
TCGGCGATGC GGCCAAGAAC CAGGTCGCTA TGAACCCAAC CAACACCGTT TTCGATGCTA AGCGTTTGAT TGGTAGACGT
CTTAGTGATG CTTCTGTACA GAGTGACATA AAATTGTGGC CGTTCAAAGT GGTTTCTGGT GCCGGTGACA AACCTATGAT
TGTGGTAAAT TACAAGGGGG AGGAAAAGCA GTTTTCCGCC GAAGAAATAT CTTCCATGGT TCTAATCAAG ATGAAAGAGA
TTGCGGAGGC CTTTCTCGGA TCCACAGTGA AGAATGCCGT GGTTACTGTC CCCGCGTACT TCAATGACTC ACAGCGTCAA
GCTACCAAGG ACGCTGGGGT CATTTCAGGG CTCAATGTTA TGCGTATTAT CAATGAACCT ACTGCGGCTG CCATTGCTTA
CGGGCTTGAC AAAAAGGCCA CTACCTCTGG GGAGAAGAAC GTTCTCATAT TTGACCTTGG TGGTGGGACT TTCGATGTGT
CTCTTCTCAC CATTGAGGAA GGAATTTTCG AGGTGAAAGC CACCGCTGGA GATACTCACT TGGGAGGTGA AGATTTTGAT
AACAGAATGG TGAACCATTT TGTTCAGGAG TTCAAGAGGA AGAACAAGAA GGATATTAGT GGAAATGCGC GAGCATTGAG
GAGGTTGAGA ACTGCATGTG AGAGGGCGAA GAGGACTCTT TCTTCCACCG CTCAAACCAC CATCGAGATT GATTCCTTGT
ATGAGGGCAT TGACTTCTAC ACAACCATCA CCCGTGCCAG ATTTGAAGAG CTGAACATGG ATCTCTTCAG GAAATGCATG
GAGCCCGTGG AGAAGTGTTT GCGAGATGCG AAGATGGATA AGAGCACAGT CCATGATGTT GTTCTTGTCG GTGGTTCCAC
CAGGATACCC AAGGTTCAAC AGTTATTGCA GGATTTCTTC AATGGGAAGG AGCTCTGCAA GAGCATCAAC CCCGATGAAG
CTGTTGCGTA TGGTGCTGCA GTGCAGGCTG CTATTCTCAG TGGCGAGGGT AATGAGAAAG TTCAGGATCT TCTCCTGTTG
GATGTTAGCC CTCTCTCCCT TGGTTTGGAG ACAGCAGGAG GTGTCATGAC TGTGTTGATT CCCAGAAACA CAACCATTCC
CACCAAGAAG GAGCAGGTGT TTTCAACATA CTCCGACAAC CAGCCCGGTG TGTTGATTCA GGTCTATGAA GGTGAACGTA
CGAGGACTCG CGATAACAAT TTGCTCGGAA AATTCGAGCT CTCTGGAATT CCTCCTGCCC CGAGAGGTGT TCCCCAGATC
AATGTCTGCT TTGATATGGA TGCCAATGGT ATATTGAACG TGTCTGCAGA GGACAAGACC ACTGGACAAA AGAATAAGAT
AACAATTACC AACGACAAGG GTAGGCTTTC CAAAGAAGAG ATTGAAAAGA TGGTGCAGGA AGCTGAGAAA TACAAGGCTG
AGGACGAGGA GCATAAGAAA AAGGTGGAAG CCAAAAATTC TTTGGAAAAT TATGCCTATA ACATGAGGAA CACAATTAAA
GATGAAAAGA TTGCTTCCAA GTTGCCTGCT GATGATAAGA AGAAAATAGA AGATGCTATT GATCAAGCCA TTCAATGGCT
GGATGGGAAC CAACTTGGTG AGGCTGATGA ATTTGAGGAC AAGATGAAGG AGTTGGAGAG CATATGCAAT CCCATCATCG
CTAAGATGTA CCAAGGTGCT GGTGGTGATG CTGGTGCAGG CATGGATGAG GATGGTCCTG CTCCTGCCAG TGGAAGCGGT
GCTGGACCCA AAATTGAGGA AGTCGATTAA 

>Vigan.06G199300.01
MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPTNTV FDAKRLIGRR
LSDASVQSDI KLWPFKVVSG AGDKPMIVVN YKGEEKQFSA EEISSMVLIK MKEIAEAFLG STVKNAVVTV PAYFNDSQRQ
ATKDAGVISG LNVMRIINEP TAAAIAYGLD KKATTSGEKN VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD
NRMVNHFVQE FKRKNKKDIS GNARALRRLR TACERAKRTL SSTAQTTIEI DSLYEGIDFY TTITRARFEE LNMDLFRKCM
EPVEKCLRDA KMDKSTVHDV VLVGGSTRIP KVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
DVSPLSLGLE TAGGVMTVLI PRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERTRTRDNN LLGKFELSGI PPAPRGVPQI
NVCFDMDANG ILNVSAEDKT TGQKNKITIT NDKGRLSKEE IEKMVQEAEK YKAEDEEHKK KVEAKNSLEN YAYNMRNTIK
DEKIASKLPA DDKKKIEDAI DQAIQWLDGN QLGEADEFED KMKELESICN PIIAKMYQGA GGDAGAGMDE DGPAPASGSG
AGPKIEEVD*