GBrowse Details

Vigan.06G155400.01

Basic Information:
Name: Vigan.06G155400.01
Multiple alignment
Variant Information
Position: Chr06:28753020..28759299 (+ strand)
Length: 6280
Functional Information:
Description: Similar to axial regulator YABBY 2-like isoform X2. [XP_004487439.1, Cicer arietinum]
InterPro: YABBY protein (IPR006780)
High mobility group box domain (IPR009071)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:7.60,1.16,31.31,29.80,0.00,44.85,0.0 0,8.47
Arabidopsis thaliana homolog: AT1G08465.1
Automatic updates:
Name: NM_001357806 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max transcription factor YABBY9 (GMYABBY9), transcript variant 2, mRNA.
PubMed ID: 28866235 NCBI(pubmed)
18927222 NCBI(pubmed)
Status: Known Variant
Name: NM_001357823 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max transcription factor YABBY11 (GMYABBY11), transcript variant 1, mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:28753020..28753158 (+ strand)
Length: 139
Type: five_prime_UTR
Position: Chr06:28753159..28753230 (+ strand)
Length: 72
Type: CDS
Position: Chr06:28755465..28755584 (+ strand)
Length: 120
Type: CDS
Position: Chr06:28755789..28755918 (+ strand)
Length: 130
Type: CDS
Position: Chr06:28756904..28756952 (+ strand)
Length: 49
Type: CDS
Position: Chr06:28757491..28757566 (+ strand)
Length: 76
Type: CDS
Position: Chr06:28758861..28758965 (+ strand)
Length: 105
Type: CDS
Position: Chr06:28758966..28759299 (+ strand)
Length: 334
Type: three_prime_UTR

>Vigan.06G155400.01 class=Sequence position=Chr06:28753020..28759299 (+ strand)
TTCTCTTCCT TCCGCGTCTT CTGTAAATCG TTGATGATCA TGTTCACTTT TCTTTCAGCC AAGTGATTCT CTCCCCCGTG
ATCTGCCTAT AAATCCACCA AGCACACACT CAAAGGACAC AGTCACATAT AGATTAAAAA TGTCAATGGA AATGATGGCA
ACGGAACGTG TTTGTTATGT TCACTGCAAC TTCTGCAACA CCATTCTAGC GGTACAGAAC TCTCTTTCTC TTTCTCTCTC
TATATCTATC TACCTATCTA TGTCTCTCTT TCTCTCTCTT TCTTTCTTCT CTTTGGTTAT TTCTTTCCAT ACTCTTCTGA
GCTTTCTGTT GCGCCACGCC CTTCACCAGC TAATTTGGCA AGTCTGGTTT TTTCTAATTT CTTTAATCGA TCGAGATCGT
GAGATGATAC AACAGCCAGG AATAAAGAAA AAGCGCTTCT GGGTACCCAT CAAAAAGCGA AATTCAGTTC AGACCTAATC
AGAATGCATG TCTGTGTATA TATATATATA TATATATATA TATATATATA TATATATCCA CATATTTATA TATATTACAT
AAATGGATGA AAACTTAACT GTTGGAAAGC ATGCAACAGA AGTATCCCAA TTTATACATA AGGGTAACTT AATTCCCGGG
GAAACACTCC AATCTATCAC TTAAAGTGAA TTAATTCGGT AAATGGGGTG GTTTTTTGTA CCAAGGATTC CACTGCTATG
TAATATTTTA TGAGAAAGTG TAACTGGGTT TTGCTCCCTA ACCTCTACCT TGATACGAGT GGTGCTAGTT TGGTCAGCGG
CAAGAGATAT ATATGTATAT ATATATATAT ATTTATATTA TATATGCAGC CAAAGTAATA GCAGAAAGTT ATGAAATTAA
ATAATTGAAA CCCCTACCCA TACCTAACAA CACAATTGTG AGAAATAAAG GAATTTTGTG AGTCAGAAGT GGAAGAAATT
TTGAGATGCT TAAAAAATGC TTACACAGGC TCAGCCTTGA GATCTATATA CTAGGGTTAT TAACAGGTAT TAGGGTTCCC
CTCTTTTGTT CAACTTTGTA ATAAATAATA ATTTTTTTTG GCAGAAGAGT AAACAGCAAC TAGTATATGA GTATATGATT
TCGTTTGGTA TATGGTATTT TTTATTCTTT GTTGGTCTGT GTACTTGTGT GCTAAATTAA CACGGTTCAG AAAATTAAAT
CTGAACACAA CAAATCCATG TGATGGTACG CAGTGCAGTT TCTCTCTCCT CAGTCTTTGA TTTGATCCTT AATTGCCTTT
CTGTGGCGAT GAGGGTGAAG CATCATATCG TCTTTTATGA TATCGTATAT TTCATCAAGT TTTTTCACGG TTTTTCACGG
TTTCAGCCTT GTTGCTTCCC TTAAGTACAG AGGCAGTGTC CTCTCTTTCT TTCTACAAGA ACTTGTGGGG ATTCTGATAA
ATTCATATTT CACCACCAGA ACAAGCTATA TCACATCATA TCATATGCCC CCTCTCTCCT TTTCTTAAAT CTTTCTTGTT
ACTTTCTTTT GTGTCTCTCC TTTCATCATA GCATGTTGAA ATTATAATTA CCCCTTTTGA GAAAGCATTC TCCTTTCTTC
TCTCCTTCTC AAATGAGATC TTACCATACC TAAAGGGCTA ATCTGCTTCA TGATGATACA TCACTCTCTT CTGGTAGTGG
TTAACGGTGG TGTAGCCCTT CAAGGCCTTG ATGGTTTCCG TTCCAGTCAA GTCCTTTTCA CCCTCTCTCT TTCCACCACA
CTATGTGCAA CAATTTCTAT CTTTTATCAT CTTGCCTTGT AGTGTCAGCA AAAAGTGATG CGCACCCACA ACAAGGGGAC
ATTGTGAGAG ATTGAGAGTA CTGAATTTTA AATCGCCCCA TGTCAGGTTC AGAGCGTTTG CTGCTATTAT ATGGATGTAT
TGAATGTGCC ACACCACACC ACACTCTCCC TAGCTGGACA CTGCACACAC ACCCTTAAAA GTATACCTCT CTCAGAATGA
ATGAGAAAAA ATTACTGCAT TCGCTTCCCT CTCTAGCTTA TTTATCATCT TCTTATAACC TCTTTCTTCT GGCAGCTGTG
CATTTTGTCT TTTTCTCTGT TCATTTTTCA TTGCAGTGCT GCATGGTGTG CTTTGGAAGC ACTTTTCTTG GGAATGTGAA
AGCTTCACTT ATCCTATACA TGTATTGTTA ACCTCTTTTG ACAATGTGAA CACCCGTATA TGTATGTATG TATACATACA
CACATATCTA TTCATATAAT ATATATATAT ATATATATAT ATGTAAGTGC GTCCATTGGT GATCAAAATT GTGCAGCTTT
AAGTTCTTGG TTTTCATTCG TGAATGCATG TTTTACTGTA TGCATACAAG TGAAGAGGAT GTTCTTATAC TCACTTTTCT
ACTGTATATC GTGTTTATTA TGTATTTGAA AATGGGGTGT TGCAGGTTAG TGTTCCATAC AACAGTTTGC TAACCATAGT
GACGGTTAGA TGTGGACATT GCGCTAATTT GCTATCAGTT AACATGGGAG CATCCCTTCA ACCATTTCCT CCTCAAGACC
CTCAGGTGTG TGTATATATA TATATATGCA TATACATTTC AGACTGTATT GGTCAATTCC CTCTTTCTGA CTCCATGGGC
AACCATAAAT GAGATAACAT AATTTCTTTA TACTCAGAGA AAAAAAAGAA GAAAAAAGCC TGCAGCTCTT TGAATGAATA
ACTGTGTGAT CCTTTACTAA TTCTTCTGTG TAATCTGTTG CTAATGAAGT CACAGAAACA GCACCTAAGC TTTGAAGAAC
CCAGCAGCAA GGAACTGGGA TCCTCATCTT CAAAATGTAA CAAAATAGCG CCATTTGAGG CAGTAGAGCA TGAACAACCA
AGGATTCCTC CCATTCGTCG TGAGTATACA TTCTCACATT TCATGATTAA TTTTCCCTCC TTTTGGTATC TGCTTTTGGA
TCGTATCCTA ATTCGCCTAA ATCTGAATGA ACAAAAAAGC AACATGTATA ACTAGACCAG CTACCTGATG AGGAGCTTTT
TAATATCAGT GACAAGTTTT AATTAAGGAT GAAAAAGACT CAAACTACTC TCTCCATAGC AGCAGAAGCT AATTTAATAC
AAGCAGCAGC AGAGCAGAAC GACCTTATCA TTGAGGGCCA CTAGTCATAA AAACAAGTTT TTCCAGTTTT TTCAGAGAGT
CGGCGTCCAT CTGAGTAACC AGTTTTTATG TGCCCAATTG GGGCATCTTG TTTTCTCCAT CAATTTTAAT GGCCCCCTCT
AAGATGGTGA CCTTACATAA CAAAAAATTG ACCCATCCTT AATTCATTGC TGTCATGCCA TGCCCTAAAA CAAGAACAAG
GACTTGTGTA TTTTATATCA CACACATATA CACATTTGAA CGCAATTATC CACGTGTAAT TCATTTTACA GTCACAGATT
CCTTTCACCA TTATATAATA ACAGCTCATC ATGGTAATTA TATTGATACT TGCAAGAAAA AGGTAGTAAG AGGTAGCAGT
ACTTAAGTTA TGTAGTGGTC GATCTTCTCT CGCTGTGAGT GAACTGTACA AAGCAATGAC GACAAAAACT GTTTCAGAAA
TAAGAAAGAA AACCCAATGG ACTCTTGGAT AAACAACGGA AATTTCAATG CTATTTGAAT GCTAGAGCAT ATAATTGAAT
GGTCCTCCAC AACCCAGTTC CACAGCTTCA GTCTGTCCAG GGAATTTGGC CTTTCGTGTG AAAAATTCCA TATCTCAACC
AGTTTTTCTG TTGGGGAATC TCTGATGTCA ATTTTTTAGG TTATTGATGA TTCATTCTAC TTAATTTTTC TCTTACATCG
TTATTCAATA TTCCTAATTA ATTCATCTCA TGATTGTTCA ACAGCTACAG AGAAGAGACA TCGTGTGCCT TCTGCTTATA
ATCGATTCAT TAAGTAAGTA GTTTTCGCCC TTTGTTATTT TAAAATCAAC CTCCTTGCTT CTCCCTAATT ACTGTGATAT
ATTATGTAGG ATTTGATTAA GGACTGAAAT TATCATCATC ACCATTATTA GAGATAATTA TACGCATTTC GTTAAAGTTA
ATGTCAATTA TATTTATACT TTCCTGACTT TTACTTTTTT TTTCAGATTA TATAAAAATA AAAGTGATGA CATGCATAAT
AATTTAAATT TTTTAAGAGT CAATAAAGTA TTATATTGGA TAATTTGTCA TTGATTAATA ACATTTACCA TTACATTATT
TATTCTAAAA AGTAGTATAT ATATAAAGAT AATAGTAAAG GGTGTAATTA CTAAAGAAAG AAACAAGCAT TATTAATTTC
AAGCGAAATG ATTAAAATTT TATTTTGTAT TCAAAGAATA AAGATGATCC AACAATCCAA GTAAATAAGT TTCTTAATTC
TAAAGTACAG TAGAGATGAT TCCATTGAGT AAAAACAAAT AGCAAGTCTT TTCAAGTGTC TGATTTTGCA GGGAGGAAAT
CCAAAGGATT AAGGCTAGTA ATCCAGATAT CAGCCACAGG GAGGCTTTCA GCTCCGCAGC CAAAAACGTG AGTTTAACCT
TAATTACTAC ATTAATCAGT ATATATCATT CTCTGATCCA TACAACTGCG TGCTGCACTT TTCTACATTT TTCATGTTTT
TTGGAGCCAC TTCTGTCAAT TTACAGACAC TCTTGTCTCT TCTATAAACT TCTTGCTCAA GGTCACAATC CAATATTATT
CCTACGGTTA TTTCAAACAT CTTTCCAAAG TAATCATCAT CTAGCTTGAG GGTATATGTG GGAAATCACA TTCTTTAATT
GGTTTACAAC CCAGGAACAT GCTATTTTAT GTTATAGCCG TGTGTGTATA TATATATATA TATATATATA TATATATATA
TATATATATA TATATATATA TATATATATA TATATATATA TATATATATA TATATATATA TATATATATA TATTTATTGG
TCATATACAA CATGAGATGT TGATAGAAAA ACAATACATA CAACATCAGA TTATCCAATC TTGTAAAGAC AAAGTTTACA
AAAGCGGATG CATTAGAAAT GGGATGTGAA TCAACATTTG TTGAGGAATA TGTTTAAGCA TTTGAGTGGG CAACTATGTT
CATTATCATA AAACCGTATC AAATCTCCCT TTTAAAAAGC CTACAACCAG TCAAATTAGG TCAAGTTTGA TAGGCCATAG
CCACTTTCAC GTGATCACTT TGTTAACCCT AACACATGCT GTAACCAGTG TCACTTGTCT AATTCGTCTA CATGTGATTC
CATCACTCTC CTATGTACTA CACTGTGCTG CTTTTGAACT CTCTTATTTT TCCTATGTAC CATAGCATGT TTTTCACCGC
ATTTTATTTG GACGCCACAC ACAGTCCAAG TTGATTGAAA AACCAGACCT GATCGATCAC CCTTCTTCAA AATGACCATG
CCTGTTCAAA ATTATGCATG TTAATTTGTA CAAGAACAGC ACAAGCATCA CAGACATTAG AGTTTCCAGA AAAAACTCTC
ACTTTATCCA TCACAACTAA TGCCATTGAA AGATATATAT ACAGAAAAAA TAACTAATAA AATGGATCTG AAAGAGTTGT
AAAGTGAGTT ACTATAATAA CATGGTCATG CTAGCCATTT TAAAGACTAA TAAGTGAAAA TCTGTTCAAA GTTTTGAAGT
TAACTTTGGA GTTTATTAGT TATATTACCT GCCAGTTCCT GCAAGAATCT TGACTATATA TGGCATAAAC AGCAGTTCAT
TGTTATATAT AAATATATAT GTTTGTGAGT CCATGAAATT TGTCTTTATG AAGAGTGCTT GATGTTTATA TGTGTATGCA
GTGGGCACAT TTCCCTCACA TTCACTTTGG GTTAAAGCTG GATGGTAACA GTCAAGGAAA GTTGGAGCAG GGAGAAGGAG
GTGAAAAGAC CAATGGATTC TACTGATATA AATGGAAGCC TGTGAGTATG AGCTTGTTTT TTTCATGCTT GACCTAAATC
AGTGAAAATG AGGTTGATCA AATTTCCCAA TCGTACAACT GGATGGGAGA CTCCTGCAAA TTAACCTCAC CCTCTCTCAC
CAATGTTTAA TAGTACATGT ATTGCCCTTT TCTATATATA TAGATATATC GTTGTTATGA AATGATTGCC ATTCTTGTGA
TTGCATTTAT TGTGTTGAAT TTGAGCCCTT AAGTAAACAA CACGTTCCTC TATATATCAT AATGATGATG ATGCTTCTTC
AATCATCATA ATCTAAAGTG TTTGAGTGTG TTTAAATCTC 

>Vigan.06G155400.01
TTCTCTTCCT TCCGCGTCTT CTGTAAATCG TTGATGATCA TGTTCACTTT TCTTTCAGCC AAGTGATTCT CTCCCCCGTG
ATCTGCCTAT AAATCCACCA AGCACACACT CAAAGGACAC AGTCACATAT AGATTAAAAA TGTCAATGGA AATGATGGCA
ACGGAACGTG TTTGTTATGT TCACTGCAAC TTCTGCAACA CCATTCTAGC GGTTAGTGTT CCATACAACA GTTTGCTAAC
CATAGTGACG GTTAGATGTG GACATTGCGC TAATTTGCTA TCAGTTAACA TGGGAGCATC CCTTCAACCA TTTCCTCCTC
AAGACCCTCA GTCACAGAAA CAGCACCTAA GCTTTGAAGA ACCCAGCAGC AAGGAACTGG GATCCTCATC TTCAAAATGT
AACAAAATAG CGCCATTTGA GGCAGTAGAG CATGAACAAC CAAGGATTCC TCCCATTCGT CCTACAGAGA AGAGACATCG
TGTGCCTTCT GCTTATAATC GATTCATTAA GGAGGAAATC CAAAGGATTA AGGCTAGTAA TCCAGATATC AGCCACAGGG
AGGCTTTCAG CTCCGCAGCC AAAAACTGGG CACATTTCCC TCACATTCAC TTTGGGTTAA AGCTGGATGG TAACAGTCAA
GGAAAGTTGG AGCAGGGAGA AGGAGGTGAA AAGACCAATG GATTCTACTG ATATAAATGG AAGCCTGTGA GTATGAGCTT
GTTTTTTTCA TGCTTGACCT AAATCAGTGA AAATGAGGTT GATCAAATTT CCCAATCGTA CAACTGGATG GGAGACTCCT
GCAAATTAAC CTCACCCTCT CTCACCAATG TTTAATAGTA CATGTATTGC CCTTTTCTAT ATATATAGAT ATATCGTTGT
TATGAAATGA TTGCCATTCT TGTGATTGCA TTTATTGTGT TGAATTTGAG CCCTTAAGTA AACAACACGT TCCTCTATAT
ATCATAATGA TGATGATGCT TCTTCAATCA TCATAATCTA AAGTGTTTGA GTGTGTTTAA ATCTC

>Vigan.06G155400.01
ATGTCAATGG AAATGATGGC AACGGAACGT GTTTGTTATG TTCACTGCAA CTTCTGCAAC ACCATTCTAG CGGTTAGTGT
TCCATACAAC AGTTTGCTAA CCATAGTGAC GGTTAGATGT GGACATTGCG CTAATTTGCT ATCAGTTAAC ATGGGAGCAT
CCCTTCAACC ATTTCCTCCT CAAGACCCTC AGTCACAGAA ACAGCACCTA AGCTTTGAAG AACCCAGCAG CAAGGAACTG
GGATCCTCAT CTTCAAAATG TAACAAAATA GCGCCATTTG AGGCAGTAGA GCATGAACAA CCAAGGATTC CTCCCATTCG
TCCTACAGAG AAGAGACATC GTGTGCCTTC TGCTTATAAT CGATTCATTA AGGAGGAAAT CCAAAGGATT AAGGCTAGTA
ATCCAGATAT CAGCCACAGG GAGGCTTTCA GCTCCGCAGC CAAAAACTGG GCACATTTCC CTCACATTCA CTTTGGGTTA
AAGCTGGATG GTAACAGTCA AGGAAAGTTG GAGCAGGGAG AAGGAGGTGA AAAGACCAAT GGATTCTACT GA

>Vigan.06G155400.01
MSMEMMATER VCYVHCNFCN TILAVSVPYN SLLTIVTVRC GHCANLLSVN MGASLQPFPP QDPQSQKQHL SFEEPSSKEL
GSSSSKCNKI APFEAVEHEQ PRIPPIRPTE KRHRVPSAYN RFIKEEIQRI KASNPDISHR EAFSSAAKNW AHFPHIHFGL
KLDGNSQGKL EQGEGGEKTN GFY*