GBrowse Details

Vigan.06G098700.01

Basic Information:
Name: Vigan.06G098700.01
Multiple alignment
Variant Information
Position: Chr06:18179658..18181554 (+ strand)
Length: 1897
Functional Information:
Description: Similar to Gb|AAF02153.1. [Q9FIV1, Arabidopsis thaliana]
InterPro: Protein of unknown function DUF538 (IPR007493)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.30,1.59,11.16,43.00,24.85,115.72,1 7.97,55.87
Arabidopsis thaliana homolog: AT5G54530.1
Structure :
Position: Chr06:18179658..18179840 (+ strand)
Length: 183
Type: five_prime_UTR
Position: Chr06:18179841..18180279 (+ strand)
Length: 439
Type: CDS
Position: Chr06:18181201..18181253 (+ strand)
Length: 53
Type: CDS
Position: Chr06:18181254..18181554 (+ strand)
Length: 301
Type: three_prime_UTR

>Vigan.06G098700.01 class=Sequence position=Chr06:18179658..18181554 (+ strand)
CAACTAGAAT CAAACCACAA AAGCCATCAA ACACAACACA ACACAACCAA GGGCGGGATT GTCATTCCAC ACCCTCTAAC
CTTTTCTTAA ACAGTCTCTA CATTTTCCAG CCTCATCAAA AGAACCACCT TAACTTAAGC CCCCTCATGT TCTTTTCTCT
TTTTGGTCTA AGCAAGCAGC ACCATGGGAG CACCAATCTT TAACACTCCC TCCTTCACAC TCTTTGTTTT TCTCTCTCTC
CAACTTTATC TCTCTTTGTC GTCCTCTCCC TCCATCCATG ACCTTCTCCG TTCCAAAGGA CTACCCCCTG GTCTCTTGCC
AGAAGAGGTA AAGTCCTACA CTTTCTCCCA AAATGGCCAC TTGGAAGTGT TCCTAGACGC ACCTTGCTTG ACCAAGTACG
AGAACAGAGT CCTCTTTGAG CAAGTCGTCA CTGCCAACCT CACCTATGGT AGCCTCATAG GAGTTGAGGG TCTCCAACAA
GAAGAACTCT TTGTCTGGCT CCCTGTCAAG GACATAATCG TAAACGACCC TTCTTCAGGG TTGATACTCT TTGACATTGG
CCTTGCCCAC AAACAACTCT CTCTCTCCCT CTTTGAAGAT CCACCTCACT GCAAGCCCGA AGGTAAACTC AATTACTCTC
AATTCGATCA CCTCTTTTTT TCCTAACCGA GATCTGTCAC TACCCTTTTC AAACTAAACT CCATCCACAA CATATGCACA
ATCTTGCTTC ACCCTACATA CAATTGACTT CTTTCATCGT ATCAATATAC TGTTTATCCC TTCTGATTCC TTTGGCTTTT
TGTTTTCATT GAGGTTTATG TTATTTTTGT CTGATAAACA GCTGTTCTCA CAGCTACATT TTCACAAACT GAATACTTTC
CGAGGTACAA TTGTATTTAG TTTTTTATAA GAAACAAATT TTGTTTCTCT AATGGTATTC TAATACAGCA GTACTTAGGT
AAAATTCAGG AACTAAACTA ACTTTTCTTT CGGTATTTAA GAAACTACTT TGCATAAGTT TCAGTAGTTT AAATAGAATT
TGTTTTGTTA TTCAGGAGAA AGGTGGTTTT TAAAGGATTA ATTTGGAAAT TTGTTCTTAA TTTTTTAGTG GCTTTGGATT
TTCATTTGCT TTCTCTGGGT TTGTCTCTCC TCGTGTCTTC ACATCCCAAT GACCACACTA ACATCAAAAA AGAGTCTCAG
ACAAGAACAT CCTACTCAAC CTTTTCCATT TCACATGCCA CAGACAAAAA CAATTAAGAG GAACTTTCCT ATGTTCAAAG
AGGAAAAAAG TACAATATTC TACACTATAT GTCAGTTCCT GAGCCTCCTG CATCATCACA GTAACATTTT TAGGCCGGAT
ATGCAGTGCA AGGTTCAAGG GGGTGGGGTT AATTACCGAT TTCATTATCT TATCTGCTTT GTTGTTTCTA GTTGGGTTTT
TTTGTCATTA TTTTTAACTT TGCATGTATT TCCAAGGCTT AAAAAGATTG TTTTTTTTTT ATATGCAAAA TTGGTGGTTG
AGGCTGATTG TATGGTTGTG CAGGTGGGTT GAGGAATCAT GTGAGGAAGG AAAAAGGTTT GGAGGTCCTG AGGTAGAAAA
AGATGCCACC CTGTGTTTCA GGCTTCACTT GTTGTCTTTT TCTATGTCAT GTTTATATAA TTTTAGCCTT GCAATGCAAC
TATAGTTAAT GAGTAGGTGC TTGAAGCGTA GAGGTTGAGC ATGTAAAAAT GTGAAGAGAG AGAGAGAGAG AAAAAAAAAC
TAAGGAATCT GATGTCGTAA TCAAATTTAC AAGTTGTAAT TTTCTTCTAA CTTTTGTGCA TTATATTCAC CGGTTATTGC
AATGTTGTTC TGTTTTTAGA TTAAAAGAAA AGAAGATATG ATAAGTTTCA AAGCAAA

>Vigan.06G098700.01
CAACTAGAAT CAAACCACAA AAGCCATCAA ACACAACACA ACACAACCAA GGGCGGGATT GTCATTCCAC ACCCTCTAAC
CTTTTCTTAA ACAGTCTCTA CATTTTCCAG CCTCATCAAA AGAACCACCT TAACTTAAGC CCCCTCATGT TCTTTTCTCT
TTTTGGTCTA AGCAAGCAGC ACCATGGGAG CACCAATCTT TAACACTCCC TCCTTCACAC TCTTTGTTTT TCTCTCTCTC
CAACTTTATC TCTCTTTGTC GTCCTCTCCC TCCATCCATG ACCTTCTCCG TTCCAAAGGA CTACCCCCTG GTCTCTTGCC
AGAAGAGGTA AAGTCCTACA CTTTCTCCCA AAATGGCCAC TTGGAAGTGT TCCTAGACGC ACCTTGCTTG ACCAAGTACG
AGAACAGAGT CCTCTTTGAG CAAGTCGTCA CTGCCAACCT CACCTATGGT AGCCTCATAG GAGTTGAGGG TCTCCAACAA
GAAGAACTCT TTGTCTGGCT CCCTGTCAAG GACATAATCG TAAACGACCC TTCTTCAGGG TTGATACTCT TTGACATTGG
CCTTGCCCAC AAACAACTCT CTCTCTCCCT CTTTGAAGAT CCACCTCACT GCAAGCCCGA AGGTGGGTTG AGGAATCATG
TGAGGAAGGA AAAAGGTTTG GAGGTCCTGA GGTAGAAAAA GATGCCACCC TGTGTTTCAG GCTTCACTTG TTGTCTTTTT
CTATGTCATG TTTATATAAT TTTAGCCTTG CAATGCAACT ATAGTTAATG AGTAGGTGCT TGAAGCGTAG AGGTTGAGCA
TGTAAAAATG TGAAGAGAGA GAGAGAGAGA AAAAAAAACT AAGGAATCTG ATGTCGTAAT CAAATTTACA AGTTGTAATT
TTCTTCTAAC TTTTGTGCAT TATATTCACC GGTTATTGCA ATGTTGTTCT GTTTTTAGAT TAAAAGAAAA GAAGATATGA
TAAGTTTCAA AGCAAA

>Vigan.06G098700.01
ATGGGAGCAC CAATCTTTAA CACTCCCTCC TTCACACTCT TTGTTTTTCT CTCTCTCCAA CTTTATCTCT CTTTGTCGTC
CTCTCCCTCC ATCCATGACC TTCTCCGTTC CAAAGGACTA CCCCCTGGTC TCTTGCCAGA AGAGGTAAAG TCCTACACTT
TCTCCCAAAA TGGCCACTTG GAAGTGTTCC TAGACGCACC TTGCTTGACC AAGTACGAGA ACAGAGTCCT CTTTGAGCAA
GTCGTCACTG CCAACCTCAC CTATGGTAGC CTCATAGGAG TTGAGGGTCT CCAACAAGAA GAACTCTTTG TCTGGCTCCC
TGTCAAGGAC ATAATCGTAA ACGACCCTTC TTCAGGGTTG ATACTCTTTG ACATTGGCCT TGCCCACAAA CAACTCTCTC
TCTCCCTCTT TGAAGATCCA CCTCACTGCA AGCCCGAAGG TGGGTTGAGG AATCATGTGA GGAAGGAAAA AGGTTTGGAG
GTCCTGAGGT AG

>Vigan.06G098700.01
MGAPIFNTPS FTLFVFLSLQ LYLSLSSSPS IHDLLRSKGL PPGLLPEEVK SYTFSQNGHL EVFLDAPCLT KYENRVLFEQ
VVTANLTYGS LIGVEGLQQE ELFVWLPVKD IIVNDPSSGL ILFDIGLAHK QLSLSLFEDP PHCKPEGGLR NHVRKEKGLE
VLR*