GBrowse Details

Vigan.06G077600.01

Basic Information:
Name: Vigan.06G077600.01
Multiple alignment
Variant Information
Position: Chr06:12764280..12766955 (- strand)
Length: 2676
Functional Information:
Description: Similar to Uncharacterized protein. [I1MI86, Glycine max]
GO: Molecular Function: DNA binding (GO:0003677)
Molecular Function: chromatin binding (GO:0003682)
InterPro: SANT/Myb domain (IPR001005)
Myb domain, plants (IPR006447)
Homeodomain-like (IPR009057)
Myb domain (IPR017930)
MYB-CC type transcription factor, LHEQLE-containing domain (IPR025756)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1.90,1.05,11.08,10.49,0.75,2.97,3.68 ,9.60
Automatic updates:
Name: NM_001363727 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max MYB-CC domain-containing transcription factor PHR26 (GMPHR26), mRNA.
PubMed ID: 28992334 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr06:12764280..12764404 (- strand)
Length: 125
Type: three_prime_UTR
Position: Chr06:12764405..12765070 (- strand)
Length: 666
Type: CDS
Position: Chr06:12765610..12765652 (- strand)
Length: 43
Type: CDS
Position: Chr06:12765945..12766011 (- strand)
Length: 67
Type: CDS
Position: Chr06:12766119..12766185 (- strand)
Length: 67
Type: CDS
Position: Chr06:12766325..12766401 (- strand)
Length: 77
Type: CDS
Position: Chr06:12766610..12766787 (- strand)
Length: 178
Type: CDS
Position: Chr06:12766788..12766955 (- strand)
Length: 168
Type: five_prime_UTR

>Vigan.06G077600.01 class=Sequence position=Chr06:12764280..12766955 (- strand)
TAGCTCTTCC CTTATTCTCT ACACTATAGA AGAGGTGTGT ATGCAGCAGC TATAGCCAAA GGCTTTCACA TCTTCATTTC
CTCTTCAATC AAAACGCACC ATATTCATCG AATTTGTTCT TCAATTTCTT TGTATTCTTC TCAGTTTTCT TCTCTCATCA
GAGAAATAAT GGATAGAATG TTCCCTCCCA AGAAGCCTTC TACTATGAAT TCCAATGACA GACCCATGTG TGTTCAAGGA
GACTCAGGCC TTGTTCTCAC CACAGACCCT AAACCACGTC TTCGTTGGAC TGTTGAACTC CATGAACGCT TTGTTGATGC
TGTTGCTCAG CTTGGAGGAC CTGACAGTAC TCTTTTTAAC ACCCCTTTTT CTTTTTCTTA ATTTTTTAAA GTGCCTCATA
GATTAGAAAG AACATCAATT CATAATATAT AAACGTTTGA AAATCAGACA CAAGTTTTTT ATTACATGGA ACATCAGAAA
TTGTCCTGAT ACATGCATGG AGATGCTGGT GTTGCTTCGC TCATAGACTC TCTTTTGTGT TGTGTGATTT TCAGAGGCCA
CTCCTAAGAC AATCATGAGG GTTATGGGTG TGAAGGGTCT CACCCTTTAT CATCTCAAGA GCCACCTTCA GGTTTGAACA
CTAGCCATAT TCAATTTTGC TTTTTTATTT TTCATTTTGG AACATTTTTG TGACACTGGA TTTCTCTGGC TATCTTGTTG
CCTCTCTTTT TTCCTTTTTC CCTTTTCCTT TTCTTCTCTG AAATTCGTAG AAATTCAGAC TTGGAAAACA GCCCCACAAG
GATTTCAATG AACACTCTAT CAAGGATGGC ATGAGAGGTT GTTAATTACT TAATTAATTT CTATTTTCTA GTTCATCACT
TTCCTTAATC TCTTAATTTG TTTACACTTC ATGAAGTTTA TTATACTTAT TCATATCACT GCAGCTTCTG CTTTAGAACT
TCAACGAAAT ATTGGCTCCT CTTCTGCCAT GATTGGTCGC AACATGAACG AGTATGCATA TTTCACTTCT GTTAAATCCT
TAACACAATA AAAAAAACTT GAAGAGAATT AGTTTTCCAT CATCTTCTCT ATTATTTCAA TTTACTGAAA TACCTTTTTC
GTTTATTAAT ACATTTATCT GTGTGTCTGA TTTAACTTAT TCTTCGAAAA AAGAACTGAT TTTTGTTTAT TGTAGAAGAA
AAAACATTTG TTATATCTAA ACTCAGATTG TTTCTACAAA TATCTATGAC ATGCACTGAG TTTTTCTTTT GATTTTCTTT
AACTTGTTGG ATGCAATATG TAGGATGCAA ATGGAAGTGC AGAGAAGACT GCACGAACAA CTAGAGGTAA ACATTACACT
TTAAAGTCCA TATGTAATCA TGTGCTTGAA AAATCCAAGG ATTTAAACAC AGTTAGGTTT TACTTTTCAG TTAAACAGAC
TAGTTTGAAA TACAAAGATG AAACATATAC ATGAGAAAAA CATTAAACCT TGAAATAAAC TCATGTTTCT GGTTTTCTTT
ACATATATGG GACAAATCTA TCCAAATATT ACGAAAATGG AAAAGTCGGA AAAATATTAC TAATTATAAA CTAAATCGTG
ACTCATGACG ACTTTAAAAA CAAAGTTATA AAGACTTCAC ACAAATTTCT GTGTAAGTAA AATCGTCAGT TTTATTTTTC
AAAAATTAAT ATTAATACTG AAATTGTCTT GCTTCGCTTT TTTATAAATT CATGAAGAAT GGAATCCTGA TAATTTTGAA
GTCGTGGTGA GTGCACATGA CTTAGTTCAT GATAGATCTG ATATAAAAAA AAAATCCTTG TGTCTGATTA GGCTTGTGAC
ATCATGTTTA ACATGGGTTT AGGTGTATTA ATGATGATTT GTCAGGTTCA GAAAAACCTT CAGCTGAGGA TTGAGGCACA
AGGAAAATAC ATGCAAAGTA TATTGGAGAA GGCTTATCAC ACACTTGCTC ATGAAAACAT GGGCACAGGC ATGAAGGGTG
TGGGATCAGC AGGTCAAGGA AGCACTGAGA TGGGTGTGAT GAAAGAATTC TGTTCTCTGA ATTACCCTTC TTTTCAAGAT
CTGAACTTAT ACGGTGGTGG TGGTGGTAGT GAAGAACTTG AAGGGTTTAT GGCATCGAAT AGTGAGAGTG TGTTTGAGGG
AAAGAAGAGA GTTTGCCCCT ACAGTGGAAG TGGGAAGAGT CCATTGATTT GGAATGATGA TCTCAGGCTT CAAGATTTGG
GAACAGCTTC ATCATGCATT AGCCCTGAAG AGGACCCTTT CAAAGGGGAT CACAAGGTTC AGATTTCACC ACCATCAATG
GATAGTGACC CCATGTCAGA GATCTATGAC ACAAAGCCAT TGTTGCTGCA TGGAGAAAGT GTATGTGTAG GTACCAATCA
CAATAAATTT GAAGCTTCTA TGAAGCTAGA AAGACCTTCA CCACAAAGAT CACCCCTTCA ACCAGAAAGG AATAGTCCTA
TGATCAATGC TAGTTCCATG GCACAAGGTA CAATTAATTT TCTTTTGGAT CATAATCATA ATTATTATTA GTCTACAAAT
TTCACCTTTC ACTTTCTCTA CATGCATTTA TTTTAGTTTC TATATATATA CATGCATTTT AATTCTTTTT AGTTCTCATA
TGTACAATTT TAATATTTTG GATTAATTAT ATTTTA

>Vigan.06G077600.01
TAGCTCTTCC CTTATTCTCT ACACTATAGA AGAGGTGTGT ATGCAGCAGC TATAGCCAAA GGCTTTCACA TCTTCATTTC
CTCTTCAATC AAAACGCACC ATATTCATCG AATTTGTTCT TCAATTTCTT TGTATTCTTC TCAGTTTTCT TCTCTCATCA
GAGAAATAAT GGATAGAATG TTCCCTCCCA AGAAGCCTTC TACTATGAAT TCCAATGACA GACCCATGTG TGTTCAAGGA
GACTCAGGCC TTGTTCTCAC CACAGACCCT AAACCACGTC TTCGTTGGAC TGTTGAACTC CATGAACGCT TTGTTGATGC
TGTTGCTCAG CTTGGAGGAC CTGACAAGGC CACTCCTAAG ACAATCATGA GGGTTATGGG TGTGAAGGGT CTCACCCTTT
ATCATCTCAA GAGCCACCTT CAGAAATTCA GACTTGGAAA ACAGCCCCAC AAGGATTTCA ATGAACACTC TATCAAGGAT
GGCATGAGAG CTTCTGCTTT AGAACTTCAA CGAAATATTG GCTCCTCTTC TGCCATGATT GGTCGCAACA TGAACGAGAT
GCAAATGGAA GTGCAGAGAA GACTGCACGA ACAACTAGAG GTTCAGAAAA ACCTTCAGCT GAGGATTGAG GCACAAGGAA
AATACATGCA AAGTATATTG GAGAAGGCTT ATCACACACT TGCTCATGAA AACATGGGCA CAGGCATGAA GGGTGTGGGA
TCAGCAGGTC AAGGAAGCAC TGAGATGGGT GTGATGAAAG AATTCTGTTC TCTGAATTAC CCTTCTTTTC AAGATCTGAA
CTTATACGGT GGTGGTGGTG GTAGTGAAGA ACTTGAAGGG TTTATGGCAT CGAATAGTGA GAGTGTGTTT GAGGGAAAGA
AGAGAGTTTG CCCCTACAGT GGAAGTGGGA AGAGTCCATT GATTTGGAAT GATGATCTCA GGCTTCAAGA TTTGGGAACA
GCTTCATCAT GCATTAGCCC TGAAGAGGAC CCTTTCAAAG GGGATCACAA GGTTCAGATT TCACCACCAT CAATGGATAG
TGACCCCATG TCAGAGATCT ATGACACAAA GCCATTGTTG CTGCATGGAG AAAGTGTATG TGTAGGTACC AATCACAATA
AATTTGAAGC TTCTATGAAG CTAGAAAGAC CTTCACCACA AAGATCACCC CTTCAACCAG AAAGGAATAG TCCTATGATC
AATGCTAGTT CCATGGCACA AGGTACAATT AATTTTCTTT TGGATCATAA TCATAATTAT TATTAGTCTA CAAATTTCAC
CTTTCACTTT CTCTACATGC ATTTATTTTA GTTTCTATAT ATATACATGC ATTTTAATTC TTTTTAGTTC TCATATGTAC
AATTTTAATA TTTTGGATTA ATTATATTTT A

>Vigan.06G077600.01
ATGGATAGAA TGTTCCCTCC CAAGAAGCCT TCTACTATGA ATTCCAATGA CAGACCCATG TGTGTTCAAG GAGACTCAGG
CCTTGTTCTC ACCACAGACC CTAAACCACG TCTTCGTTGG ACTGTTGAAC TCCATGAACG CTTTGTTGAT GCTGTTGCTC
AGCTTGGAGG ACCTGACAAG GCCACTCCTA AGACAATCAT GAGGGTTATG GGTGTGAAGG GTCTCACCCT TTATCATCTC
AAGAGCCACC TTCAGAAATT CAGACTTGGA AAACAGCCCC ACAAGGATTT CAATGAACAC TCTATCAAGG ATGGCATGAG
AGCTTCTGCT TTAGAACTTC AACGAAATAT TGGCTCCTCT TCTGCCATGA TTGGTCGCAA CATGAACGAG ATGCAAATGG
AAGTGCAGAG AAGACTGCAC GAACAACTAG AGGTTCAGAA AAACCTTCAG CTGAGGATTG AGGCACAAGG AAAATACATG
CAAAGTATAT TGGAGAAGGC TTATCACACA CTTGCTCATG AAAACATGGG CACAGGCATG AAGGGTGTGG GATCAGCAGG
TCAAGGAAGC ACTGAGATGG GTGTGATGAA AGAATTCTGT TCTCTGAATT ACCCTTCTTT TCAAGATCTG AACTTATACG
GTGGTGGTGG TGGTAGTGAA GAACTTGAAG GGTTTATGGC ATCGAATAGT GAGAGTGTGT TTGAGGGAAA GAAGAGAGTT
TGCCCCTACA GTGGAAGTGG GAAGAGTCCA TTGATTTGGA ATGATGATCT CAGGCTTCAA GATTTGGGAA CAGCTTCATC
ATGCATTAGC CCTGAAGAGG ACCCTTTCAA AGGGGATCAC AAGGTTCAGA TTTCACCACC ATCAATGGAT AGTGACCCCA
TGTCAGAGAT CTATGACACA AAGCCATTGT TGCTGCATGG AGAAAGTGTA TGTGTAGGTA CCAATCACAA TAAATTTGAA
GCTTCTATGA AGCTAGAAAG ACCTTCACCA CAAAGATCAC CCCTTCAACC AGAAAGGAAT AGTCCTATGA TCAATGCTAG
TTCCATGGCA CAAGGTACAA TTAATTTTCT TTTGGATCAT AATCATAATT ATTATTAG

>Vigan.06G077600.01
MDRMFPPKKP STMNSNDRPM CVQGDSGLVL TTDPKPRLRW TVELHERFVD AVAQLGGPDK ATPKTIMRVM GVKGLTLYHL
KSHLQKFRLG KQPHKDFNEH SIKDGMRASA LELQRNIGSS SAMIGRNMNE MQMEVQRRLH EQLEVQKNLQ LRIEAQGKYM
QSILEKAYHT LAHENMGTGM KGVGSAGQGS TEMGVMKEFC SLNYPSFQDL NLYGGGGGSE ELEGFMASNS ESVFEGKKRV
CPYSGSGKSP LIWNDDLRLQ DLGTASSCIS PEEDPFKGDH KVQISPPSMD SDPMSEIYDT KPLLLHGESV CVGTNHNKFE
ASMKLERPSP QRSPLQPERN SPMINASSMA QGTINFLLDH NHNYY*