GBrowse Details

Vigan.05G222300.01

Basic Information:
Name: Vigan.05G222300.01
Multiple alignment
Variant Information
Position: Chr05:23809602..23815505 (+ strand)
Length: 5904
Functional Information:
Description: Similar to Flavonoid 3'5'-hydroxylase. [D9N1C2, Glycine max]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: iron ion binding (GO:0005506)
Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705)
Molecular Function: heme binding (GO:0020037)
InterPro: Cytochrome P450 (IPR001128)
Cytochrome P450, E-class, group I (IPR002401)
Cytochrome P450, conserved site (IPR017972)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.29,4.98,25.99,0.14,0.00,114.11,0.48,1.72
Automatic updates:
Name: LC010617 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max W1 mRNA for flavonoid 3'5'-hydroxylase, complete cds, cultivar: Bay.
PubMed ID: -
Status: Known Variant
Name: LC010618 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max W1 mRNA for flavonoid 3'5'-hydroxylase, complete cds, strain: E023-H-12.
PubMed ID: -
Status: Known Variant
Name: LC010619 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max W1 mRNA for flavonoid 3'5'-hydroxylase, complete cds, strain: L63-2373.
PubMed ID: -
Status: Known Variant
Name: NM_001249703 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max flavonoid 3', 5'-hydroxylase (W1), mRNA.
PubMed ID: 20663233 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr05:23809602..23809714 (+ strand)
Length: 113
Type: five_prime_UTR
Position: Chr05:23809715..23810074 (+ strand)
Length: 360
Type: CDS
Position: Chr05:23811188..23811739 (+ strand)
Length: 552
Type: CDS
Position: Chr05:23814698..23815330 (+ strand)
Length: 633
Type: CDS
Position: Chr05:23815331..23815505 (+ strand)
Length: 175
Type: three_prime_UTR

>Vigan.05G222300.01 class=Sequence position=Chr05:23809602..23815505 (+ strand)
TGCCCTGCCA AACTCCACAC GACACCACAC CAAACATCAT CCTATGTTAT GTATATATGT CCCCCGGAGC TATCAAATTC
TCCACACTTA GTTCATAGCC AGTTCGTTAG ATTATGTTTG TCACCATGGA CACCTTGTTC CTTGTGAAGG AAATTTCTGC
GTCAATTTTT ATTTTCTTGG TGACCCTTTT GTCCATTCGC ACACTCTTCA AACGCCGTGG CCGGAAGCTG CCGCCGGGGC
CAAGAGGGTG GCCTGTGGTT GGTGAACTTC CTCTTATGGG AAGCATGCCC CATGTGACAT TGGCTAATAT GGCAAAGAAA
TATGGATCGG TTATGTACCT AAAAATGGGT AGTAACAACA TGGTTGTGGC TTCTACTCCT GCCGCTGCTC GTGCCTTCCT
TAAAACCCTT GACCAAAACT TCTCCAATCG GCCTCCAAAT GCTGGTGCAA CCCACTTGGC TTATGATGCA CAGGTAGGGA
TATGAACACC ACCTGCTTCT TCAATTTTAT CTATGCTTCT ATTTCCTTTT CATATATTGA AAATTTAACT ATGATTCGAA
ATCATATATA TGTGTATATA TATATATATA TATATATATA TATATATATA TGAAAAAGGT CAAGTAACTT ATAGAAATTA
AAACCTATAA ACATATTATC TTAATTTGAT TTAAAATAAT GTTGAACTTT TTTATTGAGT TAACTTAAAT TTTGTTGAAT
TTTCTTAATG AATTTTTTCT TGATAAACCT ATCACACATA TTTCAAACAA GTTTAATGTG AGCAAGATTT TTTAGATTAG
GAAACTAGTT TCTCTTTAAT TGAGAAATTA ATTACAGTAA ATTTGACCCA TATCAATGAT ACAAGTCTAT AAGACAATTA
TTTAAAGCTT AATTATGTAT TTAGAGGTAG GTTCTACTTT GTTTGTATAA AAAGAATATT TTTGTGGATT CTTCAAAACG
TGGGCTTAAT TGGATATTAT ATATAATTAA TTCCTCTATC CTCCATTTTC TTTTTAATAA TGTACACACA CTTGGAGTAA
GTTTGTTAGT TAGTACACAT AATAATGTTT TATGAATAAG AGCCTTTAAT CACATGTACG ATATATATTA TGAAAGATTA
TTTAAGAGTA AATTATAAAT ATAATTTATG TGATTTCTTG TTCAGAATAT ATTTATATCT CTTGGTTTTT TTTAGTATAG
TAGCAATCTC TCATGTTATT ACCAAGGTGT GGAAGTATAA TATTTTTAAA ACTTAAAAAA AAAAAAAAAA AAAGGTGCCG
TGGTGACGAT GTAATATTTT AAAAAATGAA TGCTTCTTGG AAATGTTAAA AAAGTTGGGA TTTGGACGTA ATTTGAGAAA
AGGTGAGGAG ACGTTAATGG AAGGTACTCT AGTATTATAT GTCAGATAAA TGAAATTGTT TTAAATACAG GGTTATGAGT
TCTGCTATTT GTATTTATGA AAGTACATTA TAATATGTAT TTTTCTTAAA AGAATCACTT TCAAATTAAG AAAAAAAAAA
AAAAAAGAGC TGATTGATAA GTTTGATCTA AATAAATATG CATGAACAAA ACACTGTGTG AAACAGGACA TGGTGTTTGC
TGAATATGGA TCAAGGTGGA AATTGCTGAG GAAACTAAGC AACTTGCACA TGCTTGGAGG AAGGGCTCTT GATGAGTGGG
GAAAGGTTCG AGAAGAAGAG ATGGGGCAGA TGCTGGGTAG CATGTACGAG TGTAGCAAGA GGGGTGAAGC TGTGGTGGTG
CCTGAGATGC TCACTTACTC TATGGCCAAC ATGATAGGCC AAGTCATACT CAGTCGTCGA GTGTTCGAGT CCAAGGGTTC
TGACTCAAAC CAGTTCAAGG ACATGGTGGT CGAGCTCATG ACTGTTGCAG GCTACTTCAA CATTGGCGAT TTCATACCCT
TCTTGGCCAA ATTGGACCTT CAAGGTATAG AGCGTGAGAT GAAGCACTTG CACAACAAGT TTGATGTGTT GCTCACAAAC
ATGATTCAGA ACCATGTGGC TTCTAAGCAT AAGAGAAAGA ATAAACCCGA TTTCTTGGAC ATGGTCATGG CTCATTATGG
TGAAGACGAC GCTCATGGGG ACAAACTCTC ACTCATCAAC GTCAAGGCAC TGCTACTCGT ACGTATCACT CTTTTTCTTA
ACTTTGACCA TTTCTTCCCC ACCCTTCAAT CAAAATAATT ATAAAATCTT ATATTAATTC TAACTCATCT TATATGCCTT
AAGTTATTCT TTTATTTAGT CCTCGTCCAT TTCTCAAACA CATCTTTCCA TGATCAAACA TCAATATTCT GTTCATTGAT
ACCTAATAAT ATTATAACTC ATTTTAACTT CTTTTTTTTT TTAAAAATAA CTGTCTCTGT TTATATATTA TAAATTAATT
TTATTTTTAA TTTTTGTATA ATCTTTAACA TATCTCTTTT ATATAGAAAC ACGAACATCT CACATGTGAG TATTGGGTAA
CAACATCTCT TACACAAGTC AATCAAGAGT AATCCAATAA TAAAAATAAA TTTAATAAAC CTCTTTAAGA TAAACTTTAT
TTATATATTA AAAAATACAT TTAAATATAA TATTATCATA AAATTAATTT GTAAAATGAG ATGACTTCAT TTACATAATA
TAAATAAAAA TTAGTTATAT CCTAATTCAT ATAAAATTTT GACACATCAT TCAACTGTGT TTATAAATTA AATATTGATA
TAATTAAAAC ATAAAAATAT AATCACGTGA TTGAAGTACC AAAAGTAGTT TCTTTCGTCA TTACCACCAT GGATATGAGT
TGTATATATC CACGATGTAA TGTGTAATGT GTCAAGTTGA AGACCACACC TTAAGCCACT AACCATACTA AAACATGTGT
TTGGGACATT CTTAGTTGTG TCTTATTCAC ATTTTCAATA CTTAGACAAA ACTTTAACAG GCGTAGCGCC TTTTGAAATA
TCACGTTAGT AAATGAAATT TACTTAAAGT CAGAGAAAAC TTTAGGTTAT ATTTTTTAGT TAATAAATCA TTCTAACAAA
GTTCGAACAA TAATAGTGAA GAGTGGATTA GGAAGAATAT CTTGTAACTT AAGTTTTTAA TTATTAATTT TATTCTTATT
AGTTATAAGT TTCTATTAAG TTGAGGGAAA TAAAGAAAAA TAAATATAAT ATTTGGAGGT TTTTTAAAAC ACACCCCCCT
CTATTCTGTA TACATATAGT GAATTATTAG CCCTACCCAT AATAATTAAT GAGTAATTAC CAAAATTTTG TCTCACTGAC
AGGTATAATT TGTCGGTGTG ATGAATTGAT GCCAAAGCTC ACTTTTTTAA AGAGAGCTAC AAGTACACTT TGAATTTTTT
TTAATAAAGA AAGTGGTTTT CCTGTTAGAA TACATAAAGT ACATTATTAT TATTATTTCT TTTGTTTAAT TAGTAATTTA
ATTGAGTCTT TATTTTCTTT TTAAAAAATC AATATTCCGT TGAATTCACG TTTACACTAC GGAAAGATTA TGTCTCAAAA
TTTAGGTTAT TTTTTATTTT GAAATTTTTC TGATATTTTT CTTTTTTCAT CTCTTACCTT CCTCCAAGTT GTTTGGGGTT
TAAAATTTAA CTACAAGTTA TTGTATTTAA TTTATTTGAA AATTTTCTTT GATAGGTTAG CTAACTTTAC ACACACACAC
ACACACACAC ATATATATAT ATATATATAT ATATATATAT ATTAAAATAA ATAAAAGATA TAAATATACA AATCAAATTA
GTAATTAAGT TTTTTTATCA ATAGTTTCAA ATCGTCAATA ACAAAGTGTA TTAGAAAGAA AAAGAAAAAC ATTACAGCTG
AATCTAAATT TTAGATCGAA TAATAAAGGA CAACCTAAGG CCGTACGTAC ATGTTGTATG TGAACTGAAG TTAACCACGA
TCGAGTGTTA TCTGTGAACT GATTCGCAAG ATCAAGTTTA ATTGCTCCGA CACGATACAG CGCTTATCTT CATTTGGAAT
TGGGACCACG GAAAAGGGTG TTCCAAGATC GTAGGACAAT ATCATTGTTT ATAATAAATA AATGTATGTA CGAAGTTGGA
TAAGATCTTT TTATTAGATT TAATCAAATC TAATTTATTT TTTTTATTTG AACTGAGATA TATTAACTAA ATTTTTTGTT
TTGTAAAATT TTAAATTTCA ATTTTCTTTG AAATCTTTAG AATACTATTT AGAGAACAAA TTTTAAATAG TTTAGTATTA
AAAATATACA TTTTTTATCA GCAAAATAAT ATCATGAATC TAAAAACTGA GTAACACAAA AATAATATAA TTTAAAAACA
TTAAATAATA CTTATGCTAT TATATTATTT AATAATAATA TTATAAGTAA TATCATTAAA TAATATATAT TAACGTCGTT
TTGAGGAAAG ATATATAGAG TCTTCTTTTA AAAAATATAA AATCACATTA ATTTATTTTT TAAAAATAAT ATTTAATTTA
ACAAAAAAAT ATAAAAACTA AAATGAATTT AAATTGAAAA ATTAAATTAC TAATTAAGTT TATAAATAAA ATTTAAAATA
TTATTAAAAT AATTTGGAAT ATTTTTATGT GAAAATATTT ATTTTCCAAA TCATTTATAC TCTTAGAAAT ATTATTGCTT
TGCAATCTTT GTCACAAAAA TTTGAGTTTT TTCAAAAATA AAAAAGTACT TTCAAATGAT CTTAGTATTT TTAACTGAGT
ATATTAATTT TTATTTTTTC GTATTGACTA CTTAAAATCT TTTTTCTGGC CAGTAATATT AATCAATGAG AGTGTCTTTC
TTATCTAATG ATAAAAGTAA GATACAACAT TAGTGAGCAT AGATCAAGCT TATATAAAAA ATCTTTAATC TAAAATTTTA
AAATAAAAAA TTGTGTCTTC TCTTCTATTT TACTTCTCAC CTTACTCTGA TGTTAGTTTT AAACTGATCC CAACATCTAA
CACCTTTTAA AATAAGTGTA GAATCTTATA CTGATGAGAA GATGAGATTA AACTTTAATT AGAGAAATTG ATTATTAAGT
TGAAATTGAA TTAAGTGTGT TATGGTGTTG TAACTGGTAT CTGATGGTCT GCACAGAACC TATTCACAGC GGGAACTGAC
ACGTCTTCAA GCATCATAGA GTGGTCCTTA GCAGAGATGC TGAAGAACCC GAGCATCATG AAGAAGGCTC ACGAGGAAAT
GGACAAAGTG ATAGGCAGGG AGCGCCGCCT CAAAGAATCC GACATCCCAA ACCTTCCCTA CTTCCAAGCC ATATGCAAAG
AGACCTACAG AAAGCACCCT TCAACTCCTC TCAACCTCCC TCGAATCTCC AAACAACCAT GCCAAGTTAA CGGCTTCTAC
ATCCCCGAGA ACACTCGCTT GAGTGTCAAC ATCTGGGCCA TTGGGAGAGA CCCCCAAGTG TGGGACAAAC CCCTCGAGTT
TAAGCCAGAG AGGTTCTTGA GTGGCAGGAA CAAAATGATC GACCCACGTG GCAATGACTT CGAGTTAATA CCCTTCGGCG
CCGGGCGAAG GATCTGCGCC GGCACCAGAA TGGGGATTGT CTTAGTGCAC TACATTTTGG GAACCTTGGT TCATTCCTTT
GATTGGAAGG TGCCACGTGA AGCGGGGGAA TTGAACATGG AGGAGACCTT TGGTCTTGCC TTGCAGAAAA AGGTTCCTCT
TGCTGCTTTG GTTACTCCTA GGTTGACTCC TAATGCTTAC ATTCCTTAGA TTACCTTTCT TATAAGCTTT CTTCTCCAAT
GCTTCTGTGG TAGCTGATTA TCTATATAGC TACTGAATAA GTGTTTGTGT TAGCACAACC AGTTGCTGTT TCTAAATATC
TTCTGATTCA GGCTTATCTA ATTTGTTTTC GGTTAATTAT GTTTTATGTT ATTCGTAGGC GACT

>Vigan.05G222300.01
TGCCCTGCCA AACTCCACAC GACACCACAC CAAACATCAT CCTATGTTAT GTATATATGT CCCCCGGAGC TATCAAATTC
TCCACACTTA GTTCATAGCC AGTTCGTTAG ATTATGTTTG TCACCATGGA CACCTTGTTC CTTGTGAAGG AAATTTCTGC
GTCAATTTTT ATTTTCTTGG TGACCCTTTT GTCCATTCGC ACACTCTTCA AACGCCGTGG CCGGAAGCTG CCGCCGGGGC
CAAGAGGGTG GCCTGTGGTT GGTGAACTTC CTCTTATGGG AAGCATGCCC CATGTGACAT TGGCTAATAT GGCAAAGAAA
TATGGATCGG TTATGTACCT AAAAATGGGT AGTAACAACA TGGTTGTGGC TTCTACTCCT GCCGCTGCTC GTGCCTTCCT
TAAAACCCTT GACCAAAACT TCTCCAATCG GCCTCCAAAT GCTGGTGCAA CCCACTTGGC TTATGATGCA CAGGACATGG
TGTTTGCTGA ATATGGATCA AGGTGGAAAT TGCTGAGGAA ACTAAGCAAC TTGCACATGC TTGGAGGAAG GGCTCTTGAT
GAGTGGGGAA AGGTTCGAGA AGAAGAGATG GGGCAGATGC TGGGTAGCAT GTACGAGTGT AGCAAGAGGG GTGAAGCTGT
GGTGGTGCCT GAGATGCTCA CTTACTCTAT GGCCAACATG ATAGGCCAAG TCATACTCAG TCGTCGAGTG TTCGAGTCCA
AGGGTTCTGA CTCAAACCAG TTCAAGGACA TGGTGGTCGA GCTCATGACT GTTGCAGGCT ACTTCAACAT TGGCGATTTC
ATACCCTTCT TGGCCAAATT GGACCTTCAA GGTATAGAGC GTGAGATGAA GCACTTGCAC AACAAGTTTG ATGTGTTGCT
CACAAACATG ATTCAGAACC ATGTGGCTTC TAAGCATAAG AGAAAGAATA AACCCGATTT CTTGGACATG GTCATGGCTC
ATTATGGTGA AGACGACGCT CATGGGGACA AACTCTCACT CATCAACGTC AAGGCACTGC TACTCAACCT ATTCACAGCG
GGAACTGACA CGTCTTCAAG CATCATAGAG TGGTCCTTAG CAGAGATGCT GAAGAACCCG AGCATCATGA AGAAGGCTCA
CGAGGAAATG GACAAAGTGA TAGGCAGGGA GCGCCGCCTC AAAGAATCCG ACATCCCAAA CCTTCCCTAC TTCCAAGCCA
TATGCAAAGA GACCTACAGA AAGCACCCTT CAACTCCTCT CAACCTCCCT CGAATCTCCA AACAACCATG CCAAGTTAAC
GGCTTCTACA TCCCCGAGAA CACTCGCTTG AGTGTCAACA TCTGGGCCAT TGGGAGAGAC CCCCAAGTGT GGGACAAACC
CCTCGAGTTT AAGCCAGAGA GGTTCTTGAG TGGCAGGAAC AAAATGATCG ACCCACGTGG CAATGACTTC GAGTTAATAC
CCTTCGGCGC CGGGCGAAGG ATCTGCGCCG GCACCAGAAT GGGGATTGTC TTAGTGCACT ACATTTTGGG AACCTTGGTT
CATTCCTTTG ATTGGAAGGT GCCACGTGAA GCGGGGGAAT TGAACATGGA GGAGACCTTT GGTCTTGCCT TGCAGAAAAA
GGTTCCTCTT GCTGCTTTGG TTACTCCTAG GTTGACTCCT AATGCTTACA TTCCTTAGAT TACCTTTCTT ATAAGCTTTC
TTCTCCAATG CTTCTGTGGT AGCTGATTAT CTATATAGCT ACTGAATAAG TGTTTGTGTT AGCACAACCA GTTGCTGTTT
CTAAATATCT TCTGATTCAG GCTTATCTAA TTTGTTTTCG GTTAATTATG TTTTATGTTA TTCGTAGGCG ACT

>Vigan.05G222300.01
ATGTTTGTCA CCATGGACAC CTTGTTCCTT GTGAAGGAAA TTTCTGCGTC AATTTTTATT TTCTTGGTGA CCCTTTTGTC
CATTCGCACA CTCTTCAAAC GCCGTGGCCG GAAGCTGCCG CCGGGGCCAA GAGGGTGGCC TGTGGTTGGT GAACTTCCTC
TTATGGGAAG CATGCCCCAT GTGACATTGG CTAATATGGC AAAGAAATAT GGATCGGTTA TGTACCTAAA AATGGGTAGT
AACAACATGG TTGTGGCTTC TACTCCTGCC GCTGCTCGTG CCTTCCTTAA AACCCTTGAC CAAAACTTCT CCAATCGGCC
TCCAAATGCT GGTGCAACCC ACTTGGCTTA TGATGCACAG GACATGGTGT TTGCTGAATA TGGATCAAGG TGGAAATTGC
TGAGGAAACT AAGCAACTTG CACATGCTTG GAGGAAGGGC TCTTGATGAG TGGGGAAAGG TTCGAGAAGA AGAGATGGGG
CAGATGCTGG GTAGCATGTA CGAGTGTAGC AAGAGGGGTG AAGCTGTGGT GGTGCCTGAG ATGCTCACTT ACTCTATGGC
CAACATGATA GGCCAAGTCA TACTCAGTCG TCGAGTGTTC GAGTCCAAGG GTTCTGACTC AAACCAGTTC AAGGACATGG
TGGTCGAGCT CATGACTGTT GCAGGCTACT TCAACATTGG CGATTTCATA CCCTTCTTGG CCAAATTGGA CCTTCAAGGT
ATAGAGCGTG AGATGAAGCA CTTGCACAAC AAGTTTGATG TGTTGCTCAC AAACATGATT CAGAACCATG TGGCTTCTAA
GCATAAGAGA AAGAATAAAC CCGATTTCTT GGACATGGTC ATGGCTCATT ATGGTGAAGA CGACGCTCAT GGGGACAAAC
TCTCACTCAT CAACGTCAAG GCACTGCTAC TCAACCTATT CACAGCGGGA ACTGACACGT CTTCAAGCAT CATAGAGTGG
TCCTTAGCAG AGATGCTGAA GAACCCGAGC ATCATGAAGA AGGCTCACGA GGAAATGGAC AAAGTGATAG GCAGGGAGCG
CCGCCTCAAA GAATCCGACA TCCCAAACCT TCCCTACTTC CAAGCCATAT GCAAAGAGAC CTACAGAAAG CACCCTTCAA
CTCCTCTCAA CCTCCCTCGA ATCTCCAAAC AACCATGCCA AGTTAACGGC TTCTACATCC CCGAGAACAC TCGCTTGAGT
GTCAACATCT GGGCCATTGG GAGAGACCCC CAAGTGTGGG ACAAACCCCT CGAGTTTAAG CCAGAGAGGT TCTTGAGTGG
CAGGAACAAA ATGATCGACC CACGTGGCAA TGACTTCGAG TTAATACCCT TCGGCGCCGG GCGAAGGATC TGCGCCGGCA
CCAGAATGGG GATTGTCTTA GTGCACTACA TTTTGGGAAC CTTGGTTCAT TCCTTTGATT GGAAGGTGCC ACGTGAAGCG
GGGGAATTGA ACATGGAGGA GACCTTTGGT CTTGCCTTGC AGAAAAAGGT TCCTCTTGCT GCTTTGGTTA CTCCTAGGTT
GACTCCTAAT GCTTACATTC CTTAG

>Vigan.05G222300.01
MFVTMDTLFL VKEISASIFI FLVTLLSIRT LFKRRGRKLP PGPRGWPVVG ELPLMGSMPH VTLANMAKKY GSVMYLKMGS
NNMVVASTPA AARAFLKTLD QNFSNRPPNA GATHLAYDAQ DMVFAEYGSR WKLLRKLSNL HMLGGRALDE WGKVREEEMG
QMLGSMYECS KRGEAVVVPE MLTYSMANMI GQVILSRRVF ESKGSDSNQF KDMVVELMTV AGYFNIGDFI PFLAKLDLQG
IEREMKHLHN KFDVLLTNMI QNHVASKHKR KNKPDFLDMV MAHYGEDDAH GDKLSLINVK ALLLNLFTAG TDTSSSIIEW
SLAEMLKNPS IMKKAHEEMD KVIGRERRLK ESDIPNLPYF QAICKETYRK HPSTPLNLPR ISKQPCQVNG FYIPENTRLS
VNIWAIGRDP QVWDKPLEFK PERFLSGRNK MIDPRGNDFE LIPFGAGRRI CAGTRMGIVL VHYILGTLVH SFDWKVPREA
GELNMEETFG LALQKKVPLA ALVTPRLTPN AYIP*