GBrowse Details

Vigan.05G129500.01

Basic Information:
Name: Vigan.05G129500.01
Multiple alignment
Variant Information
Position: Chr05:10487881..10491944 (- strand)
Length: 4064
Functional Information:
Description: Similar to Uncharacterized protein. [A0A022QC35, Mimulus guttatus]
GO: Molecular Function: acid-amino acid ligase activity (GO:0016881)
InterPro: Ubiquitin-conjugating enzyme, E2 (IPR000608)
Ubiquitin-conjugating enzyme/RWD-like (IPR016135)
Ubiquitin-conjugating enzyme, active site (IPR023313)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:497.29,194.51,293.66,426.49,335.94,6 39.78,443.36,245.93
Automatic updates:
Name: NM_001248040 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527105 (LOC100527105), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:10487881..10488324 (- strand)
Length: 444
Type: three_prime_UTR
Position: Chr05:10488325..10488468 (- strand)
Length: 144
Type: CDS
Position: Chr05:10489154..10489258 (- strand)
Length: 105
Type: CDS
Position: Chr05:10490721..10490848 (- strand)
Length: 128
Type: CDS
Position: Chr05:10491717..10491786 (- strand)
Length: 70
Type: CDS
Position: Chr05:10491787..10491944 (- strand)
Length: 158
Type: five_prime_UTR

>Vigan.05G129500.01 class=Sequence position=Chr05:10487881..10491944 (- strand)
TAATTATTGT CTCTTTCCTT ACTTAGTCAT ATCTGCAACT TGGTTTGGTT TTCTCTTCCA CCTTTGTTTC GTTCAAGAGG
GGCTTCTCTC TCTTTCTCTC TCTGCAACGC TTCCTTTTCT TCGTAGATCG AACGCGAATC TTCTTCTGTT CTTTTTCCAT
GGCCTCTAAG CGGATTCTGA AGGAGCTCAA GGACCTCCAG AAAGACCCTC CAACCTCTTG CAGTGCCGGT ACAATTTCTT
TCACCCAATT CCTCTTCTGT TTTCCCCCTT TTCGCGTTGT TTCCACGCCA AACTTTGATT AAGCTTCCTA TGTTGCTCGA
TCTGTGACTT TTGGAATTTA CAAGCATCTG GGTCGTTGTT TTCTTTTTTC TTTCTCTCTT TGTTTCATGG GTTTGTCTGG
ATTTTGTTAT AGTTACTAGA TGGTGGTTTA CGTGTGTGAA TGTAATAAAT TTACAATTTT TGAGGTGGTA GGATGAAATA
TTTTTTACAA GCTTCTCATC CCAGGGCGTG ACCTTAGAAG ATTATTCTCA AATACTATAT CTTGTGAGAT TTTTCTGCTA
GTCAGAAGCT TTTCTTGGTT AAGGGCCATA ATTAATAACG AACGATTCGT AAGTTTGTTG TTTCTAAAGT TTTTTATTAA
TAGGTCTCGA TTTTAAATTA AATCCCCTTT GTGTTCCTTC TACTGAAGCT AATTCTGCAT TTAAAGTGCA AACGCCGCGA
CTGTTATAAT CTCACGGGTC TCTATTGCCT TCTGTTAATG GAGATTCTCT CCAAAGTCTG AGACACTTGA GTTATGGATT
TGCAAGAACT ATCATAACTT GTAGATGGAG AGACTATTAT GATTATCTCT GCTTTGGTTG TTGAATGCAT TGGAAGATAA
CTCTCATTTT ATGATTATAT GTGACTGATG TATTGTTATC TGAGATTAAG AATGTATTTA TTAAACATGC AGATGTAAGT
TTGAAGTCTG TATGTATTTG AAAAATTTAT TTAAGCTCCA TTATTTAGTC TGTTACACAT TATACATTAT TTTCTGATTC
TATATTTCAA ATTTAATGTT AAGTTTATTG TTTTCTGATG ATTATTACCT TCCCAGGTCC CGTAGCAGAA GACATGTTTC
ATTGGCAAGC AACTATAATG GGACCCCCTG ACAGTCCTTA TGCTGGGGGT GTTTTTCTAG TCACTATTCA TTTTCCCCCT
GATTATCCAT TCAAGCCACC CAAGGTATTG CCTTAGTGTC CTGCTCAATA CAACTTCAAC AACTCTGCTT TTATTATATC
TATGCTAAGA GAATAGTGGA TTTTTTTCGT TTATGTTGAT ACATTTTATA TTTTTCCTGA ATTTTAGATT GTTCCTACCA
TTTGTTGAAT AAATTTTATG ATTTTTTTTA AAGATATTTT TGTTTTGATT TGAAACATGC AATGCACGCT TCCTTCGCTA
TGCTGTTAAA ATCTTTTCAC AATGTAACTT GGGTTGGGTG CCTTGACTGA GATGTTTATA CTAGTGACAT ATTGAATTTT
GGCAGTTACT GATATGTGTG CTAAATCACA GTCTGGTGGC ATTTTTGGGA GTTAGATGAG TCCATACCAT TTACTAATGA
AAATGCTGTT ATTTTATATG TAGTGGACTA TTCTAGTTTT TCGGTTGTGG AGTTTTATTT TATGCCTAGA AGTTTACAAT
ATGTGCTTGC TTGCTTTAGA AACAAATATT AGTTTTCCTG GATGGGGAGT TGCTTATTTG CTGTTTTCAC ATGCTGAAGT
TTCTAAAAGT TACCTGTAGT CTGTATAGAT GGAGCTACCT CGTTAAAACC AAAAATTTTC AATGAGTAAT AAAAAGTTTA
TAAACTAGCT AAATAATGAA TTCTGTAATT ATAAGCTGTG AAGTGAAGGT GCTAAGTTTG AAGTAGCCGC TATTTGGAGA
ATGCAACTAG GAGTCGTGGA TGCTGTTTTT TGTATAGCAT ATGAGGGGAC CGAAGGAGTT GACAAATTAA ATTTCAAGGG
GAAGATTTTG GGGTTAGAGC AGTTGGGGAG AGAGGTATTA GAAGATATGA CTGTGGAACT GGTGGTTACT CAATATCTAT
ACGACAGAAG AACCTGTTTT TCTTGGTTCA GAGAAACCAT TGACCACCAG AGATTTTCAG ATCCTTCATG TGATAGGGTG
TACTTTAGAG AGTAAAGTGT AAACAGTAAC TCAAGAGTTT ACATGTTCAT AAATTTCCAT TTGCTTGTAT TTTATAAAAA
TATCAACATT ATTATTTTTT ATTATCGATA ATCATAAAAT TCCTACTTTA TTCATCCGAT TCACCATGAG TGGTGATGTA
TGCAAATAAA TTTACTGTGG TTTCTGTCAC TGAGGGCTGG TATCGTTACT CTAACTTTAC CTTTAAATCA TTTAAAGGAA
GATTGTCTGG TTGCACCTTA AAGACAAAAC ATAATTAATT CTCTAATTCA GTGATCTGGA TTCAGTCTTT CTATTTGATA
TTTCAGAATT TAGATTTGAA TTATTTGCTT AGAAAGTATA TGTTAGCAAC TCTTCTGTTT TTTGGAAAAT GGAATTAGCT
TTTCCAATGA CTTACTTTTA TGTTCACCGT TACTACTCTT TAGACGTGAC CTCCAATTCA CATAAAGCTC CTTTTATTCA
ATGCTTTAAC CCTTCTTTTT CTGTATGTCT ACTTTATTTC TTGCAGGTTG CATTCAGGAC AAAAGTTTTT CACCCAAATA
TCAACAGCAA TGGTAGCATT TGTCTCGATA TCTTAAAGGA GCAGTGGAGC CCTGCCTTGA CAATATCTAA GGTTATGACT
GTACTAAACT TCTTAATGCT AATCTTCTAT GGCTTTACTT GTGATGGAAA GGTAGTTTTG CAATACAGTA ACAATGCTTA
TAATCACAAA TATTTCTGAG GCAAAGAATA TACAAGGAAT CGGTAGAGAA ATCCAACAGT TAATTTAGCA TCGTGCTACT
TGTGGTCTGT GTGATATGAG GATGTCTGTC GTAATCCAGA ATATTGATGG TTATGTATGG CATGGGGCGA GTGCCATACA
TAATCTATAA ATTGATGGTT AAAATTTCTT GGAAATTGTA AAATCATGAA TGAGACTCAT TAAATATGAA TTGGAATCCA
CTAAACTTTA TGATTTCTAA TAAATTTCAC CCAAAAATAG TAGGGTGGGC TCTTTCGTTT CTAAAGTTAT GAAAAGTATG
CTGGGTCTAT TTCACATTCT GGGGCCTGGA CTGCGTGCAA TACTTGTAGT ATACTATTTT ATTGCATGCA TCTGTTTCAC
CATATAAAAC CTAAGTTCTG GCTAGCAATA TTGTATATCA TTCAAGGAAC ACTTCTTAAT GTGGTCTTGT GAAACTTTTT
CTGGGAGAAA CATTGGAAGG CCTCCTATTG CAATGTTTTA TGTATATGGT TGCTGTTTCT CTTAGACTAT TGCTGTTTTT
TAAATGGGTG GGAAGGGTTT CTCTTTCCTT TTTCAGGTGC TGCTCTCCAT TTGCTCCCTA TTGACGGATC CAAACCCAGA
TGATCCCTTG GTGCCTGAAA TTGCTCATAT GTACAAGACA GACAGGTCCA AGTATGAGAC AACTGCTAGG AGCTGGACTC
AGAAGTATGC AATGGGCTAG TATGTTGCAA TGAGGCCTTA TATTAAGGAT AGGACATGTT CCTTCCATTT GTTAAAAGAC
ATTAATGTAT AATCTATCTT TCCATTCCCG CTGTTGACTT ATGTCGTGGA TAGGTCTCTT GTTGCCCACA TACATCTGTG
AAGACAATAG GGAGGATTTT TAGTGTGTTT GTATGAAACT TCTCCTGTGA GTGCTGGGAA ATATCAGTTG CTGATATTGT
TCACTTGTGC TCACAATTAT TTATCTTTGC ATACTATGAT GATTCCTAGT TCCTACAACT TACTTGGATT CCTTACCAAT
ACTTCACTTC TTTATGACAT TATAGTGATA GCTATATACC GAAACTATAT ATTTGTATTA TTGACTATGG AATCATCTTT
TGTTCTGTTT GGTGAAAAGT TGTTTCATGG ATACCCTTCT ATTAAATTAA CCAAGTTTTG TTTA

>Vigan.05G129500.01
TAATTATTGT CTCTTTCCTT ACTTAGTCAT ATCTGCAACT TGGTTTGGTT TTCTCTTCCA CCTTTGTTTC GTTCAAGAGG
GGCTTCTCTC TCTTTCTCTC TCTGCAACGC TTCCTTTTCT TCGTAGATCG AACGCGAATC TTCTTCTGTT CTTTTTCCAT
GGCCTCTAAG CGGATTCTGA AGGAGCTCAA GGACCTCCAG AAAGACCCTC CAACCTCTTG CAGTGCCGGT CCCGTAGCAG
AAGACATGTT TCATTGGCAA GCAACTATAA TGGGACCCCC TGACAGTCCT TATGCTGGGG GTGTTTTTCT AGTCACTATT
CATTTTCCCC CTGATTATCC ATTCAAGCCA CCCAAGGTTG CATTCAGGAC AAAAGTTTTT CACCCAAATA TCAACAGCAA
TGGTAGCATT TGTCTCGATA TCTTAAAGGA GCAGTGGAGC CCTGCCTTGA CAATATCTAA GGTGCTGCTC TCCATTTGCT
CCCTATTGAC GGATCCAAAC CCAGATGATC CCTTGGTGCC TGAAATTGCT CATATGTACA AGACAGACAG GTCCAAGTAT
GAGACAACTG CTAGGAGCTG GACTCAGAAG TATGCAATGG GCTAGTATGT TGCAATGAGG CCTTATATTA AGGATAGGAC
ATGTTCCTTC CATTTGTTAA AAGACATTAA TGTATAATCT ATCTTTCCAT TCCCGCTGTT GACTTATGTC GTGGATAGGT
CTCTTGTTGC CCACATACAT CTGTGAAGAC AATAGGGAGG ATTTTTAGTG TGTTTGTATG AAACTTCTCC TGTGAGTGCT
GGGAAATATC AGTTGCTGAT ATTGTTCACT TGTGCTCACA ATTATTTATC TTTGCATACT ATGATGATTC CTAGTTCCTA
CAACTTACTT GGATTCCTTA CCAATACTTC ACTTCTTTAT GACATTATAG TGATAGCTAT ATACCGAAAC TATATATTTG
TATTATTGAC TATGGAATCA TCTTTTGTTC TGTTTGGTGA AAAGTTGTTT CATGGATACC CTTCTATTAA ATTAACCAAG
TTTTGTTTA

>Vigan.05G129500.01
ATGGCCTCTA AGCGGATTCT GAAGGAGCTC AAGGACCTCC AGAAAGACCC TCCAACCTCT TGCAGTGCCG GTCCCGTAGC
AGAAGACATG TTTCATTGGC AAGCAACTAT AATGGGACCC CCTGACAGTC CTTATGCTGG GGGTGTTTTT CTAGTCACTA
TTCATTTTCC CCCTGATTAT CCATTCAAGC CACCCAAGGT TGCATTCAGG ACAAAAGTTT TTCACCCAAA TATCAACAGC
AATGGTAGCA TTTGTCTCGA TATCTTAAAG GAGCAGTGGA GCCCTGCCTT GACAATATCT AAGGTGCTGC TCTCCATTTG
CTCCCTATTG ACGGATCCAA ACCCAGATGA TCCCTTGGTG CCTGAAATTG CTCATATGTA CAAGACAGAC AGGTCCAAGT
ATGAGACAAC TGCTAGGAGC TGGACTCAGA AGTATGCAAT GGGCTAG

>Vigan.05G129500.01
MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP PDSPYAGGVF LVTIHFPPDY PFKPPKVAFR TKVFHPNINS
NGSICLDILK EQWSPALTIS KVLLSICSLL TDPNPDDPLV PEIAHMYKTD RSKYETTARS WTQKYAMG*