GBrowse Details

Vigan.05G092000.01

Basic Information:
Name: Vigan.05G092000.01
Multiple alignment
Variant Information
Position: Chr05:7046228..7051005 (+ strand)
Length: 4778
Functional Information:
Description: Similar to MO25-like protein At5g47540-like isoform X2. [XP_006597602.1, Glycine max]
GO: Molecular Function: binding (GO:0005488)
InterPro: Armadillo-like helical (IPR011989)
Mo25-like (IPR013878)
Armadillo-type fold (IPR016024)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:29.42,16.65,25.40,28.93,13.76,19.21, 23.02,26.45
Arabidopsis thaliana homolog: AT4G17270.1, AT5G47540.1
Automatic updates:
Name: NM_001363815 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max putative MO25-like protein (LOC100797189), transcript variant 1, mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:7046228..7046574 (+ strand)
Length: 347
Type: five_prime_UTR
Position: Chr05:7046575..7046694 (+ strand)
Length: 120
Type: CDS
Position: Chr05:7047264..7047428 (+ strand)
Length: 165
Type: CDS
Position: Chr05:7047597..7047715 (+ strand)
Length: 119
Type: CDS
Position: Chr05:7048066..7048140 (+ strand)
Length: 75
Type: CDS
Position: Chr05:7048404..7048497 (+ strand)
Length: 94
Type: CDS
Position: Chr05:7048595..7048654 (+ strand)
Length: 60
Type: CDS
Position: Chr05:7049363..7049431 (+ strand)
Length: 69
Type: CDS
Position: Chr05:7049829..7049927 (+ strand)
Length: 99
Type: CDS
Position: Chr05:7050231..7050275 (+ strand)
Length: 45
Type: CDS
Position: Chr05:7050360..7050462 (+ strand)
Length: 103
Type: CDS
Position: Chr05:7050536..7050594 (+ strand)
Length: 59
Type: CDS
Position: Chr05:7050595..7051005 (+ strand)
Length: 411
Type: three_prime_UTR

>Vigan.05G092000.01 class=Sequence position=Chr05:7046228..7051005 (+ strand)
GTGAGTGTAT TTTGTGTTTG GCTGAAACTG GAGCCAGTAA ATAAAATTTT GATGAATTAC GAAAGCAGGA GGAGGGTTGT
TTTTTCTGGT ATTAGTGTGT GAGGTCCAAT CCCAATCCTC TACCTCATCC TTTTCTTCCA TCCATGTTCA GTTCCTCTAT
AATTCCCCAA CAAAATCTCA GAAGTAAATA AATAAATAAA TAATCATTAT ATTTGGAAAT AATTAAAATA TCCAGATTCA
TCTTGTTCTT ATTTTGCCCA TCCCTTCCAC TCCCTGAGAA TCCCAAACCC TAACTAGACT GTGTGATCAG AGAGAAAAGG
AAAGATTACA CACAGCACTT TGAGAAGATG AAGGGTCTCT TCAAGTCTAA ACCTCGCACT CCTGCAGATG TAGTGCGTCA
CACCAGAGAT CTTCTACTCT TCGTTGATCG GAACTTCGAA TCCCGCGAAA GTAAAAGAGA AGAGAAGGTT CGCTTGTTCC
TTTAGTTTTA GATCGCATTT TTTACTTTTT GTTTTTTTTT TTCAATTTCT TATTTTCCTG ATTCTCTGAT CTCAACTAAT
TTTGTAACTG TGATTGTTGA ATGGAAAACT ATAATAAACA AGAAGTTCCC AATGCTTAAT ACTTCGCCAT TGATTGGAAC
CTTAGGGTCT TGATTTGTGA ATCACGAAAA CAGCTGCATG TTGTTTACGA CAATCTTTAA CTCATGGTTG ATATTTTTTC
TCAATAGAGT GTTAGTTTAG AGGATACGAT TAATCACTGT GGTTGGTATT AAGTTGCTTT TTAATAGTTC GATTGTATTT
TAATATTGCA AATTTTGTTG GTTTGTTGGG TTTGGCGGGT GGAACTTAGT GGTAAAAGTA ATTAAACTTG ATATGCTATC
ATCATGCATT GTCGGAGCTG TAGTGAATTT GTGTAAGCAA ATTGGAACCG GTGGAGTTAT TTCGTTTGAT GATTTTTTAT
TGGATCTTGG CTTTTTGTGC GGGAATTCGT GAGTTCTTAT TTGATTTTTA TGATGTTTGT GTGGTCCATT TAACAGCAAA
TGTCCGAGCT ATTTAAAAAC GTCAGGGAGC TTAAGCAAAT CCTGTATGGA AATAGTGATT CTGAACCAGT TGCGGAAGCT
TGCGCACAGT TGACTCAGGA GTTCTTTAAG GAGGACACAT TGCGTCTGTT TATCAAATGT CTTCCAAAAT TGAATCTGGA
GGTATTAGGG AAATTTATTT GACCTCCTGA TTATGCCGTT GGTTTAGGTA CCCTTTGTAG GATGAGTATG CTTATTAAAA
ATTTGGATGG GGTAGAATCA CATGTTTATC CAGATGTTGT ACTGTGATTG TGTACTATTT GCTAACCTGG TGACTGTGGG
CTTTTGCAGG CCAGAAAAGA TGCCACTCAA GTTGTTGCAA ATTTACAAAG GCAACAGGTT CAGTTTAAGT TGATTGCATC
TGATTACCTG GAAAAAAATC TGGATCTTAT GGATGTCTTG ATAGTTGGGT AAGAAAACAT TGGATGACAT TCTTTTGTTT
CTTAGCTTTG CAATCAGTAT GGTGGACTCT TCTGCTTAAT CAAATGATTG TAAATAAATT CTTTTGTCAA CCTTAAAAAT
TTAATTTCTG TAAATCAGCC ATGATGATAA TCTCACGTCC TGCTTAAAAA TTTAATTTCT GTAAATTCTT TTGTGATTTT
TTAATTTAGT TATGTGACTT GTATGTCTTC TTTTCTTAAC ATATTTCGAT GCCTATGTTA TTTCTTTTTT TCTCACTGTG
CCTGTCAATA AGTGATACTT AACAAGGTAA TGATTCTAAT TCCTGTATGC AACTGACTAA TAATTGCTTG CCTTTCAGCT
ATGAAAACAC AGATATGGCT TTACACTATG GTGCAATGCT AAGGGAGTGT ATTCGACATC AAATTGTCGC AAAGTAAGGA
AATAGAATGT GATCGATTCA TTTTTTGTGT GTGTACTATC AAGCTGTTAA TGATTGGTGA ATACTAGAAA CTACTGTTAA
GGTTGTAATC TATGTTAGAA TAGCCCTGCA TTTCCTATAC TTTTCTTATA TGTGCCCTCC TCTGATTCAT ACAAAATGAT
TGGTGTTGTG TGTGAAGTTA GGAAAGACCT AGGACATATA ATTTCCCCTC ACATCATAAC TATAGTGTTG TTTAATTCTT
CATATTTTTA TATCAGATAT GTTCTCAACT CACCACTTAT GAAGAGATTC TTTGACTATA TCCAACTCCC AAATTTTGAC
ATTGCTGCGG ATGCTGCAGC TACCTTTAAG GTGCATTTTG TGTGAAAGAA CTTGTGATTA CAAATTCCTT TGTGCAATGC
ACATTTTTTG AACAGAGTTC ATGACACATA GTTTTGTGTT GTCTCAGGAG CTCTTGACAA GACATAAATC TACTGTAGCC
GAATTCCTTT CCAAGAATTA TGAATGGGTA AGTTACCCCT TCAAAGTTCA ATCTTTGTAT AAAGTAGCAT TTCAATTTTA
ATTTATACAC CTCACTTCCA TGCTACCTTT GTCTTTTCAT TACATTCTAT TGCTAAATAA TATGCATGAG TTTTATTTTT
TTAGTTAAAT TTCTCATATA ACAGCTTATA ATTTGATGGT ATGAACATGA TATCGACTTT GTTTTAGTTT TATAGAGTTT
TTAAAGGTTA GTGTCTTTGA TATAAATTAT AATAAACTGA CAAACGATTT TAAAAACTCA AGTTCTGATA CTATTTTAAA
TTTATCCTTT TCATTCATAT GAAATGACCA TAGTAGAATT ATATTTTTTG TTTCTCTGCT TCTAACTTCT AAGTATTGGT
TTCTGAACTG ATAAGAGATA TTGTAGAAAA TTATTCTGCA TGCATTGTGG ATGAAAATAT CTTCTATCAA AAAGTCATTT
AGTTTTTGTG ATTATTAACC ACGTGTTTAA TTTTTTTTAT ATGATTATTA ACTTCACAAG TATGTTCGTT TAATGTAATT
AGGGATTTTT TAAAATATTA CCTTTTCGAA CATTTGTTTT AAAACTTTAT GCGGCTGACA TATAATTATC TGGTTGTCAG
TTTATATTAA CATGTTTTAT TTGTACCTGG TTTATTCAAG TAGTTAATGC CCATTACTTA TCAACGAATA CTCACTTTGT
TATTGCTGCT TTCAGTTTTT TGCAGAATAT AACACTAAGC TGTTGGAATC TTCCAATTAC ATTACAAGGC GCCAAGCTGT
CAAGGTTCTA TATAAGTTTT TGGTTTATCC ATATAAATTT AATTTTGATC TCAACTATAA TTCTTGCCTG TTGAAAACTT
AAATTTGGGT TTGAGAAACG TACACCTCCT TGTGTGTACA TTTTTAGTTC ATTTGACCAA TGAAATTTCC TGAAAATTGT
AAACAAAAGT ATCACAGCTA GTCAACAGAT ACTTTCCTAG TGGATTTCGG TAGTATCTTT GCCTGTTCAT GCATTCATTT
GTAGTTCATT TGACCTATGA ATTTTCCTGA ATTGCTATTG AATTTTCTTC ACTCTCCATC CCCGCCCCCC CTGAATGTTG
GAGTTTTGGT CTTTACAGTC TTCTGTTCAT TTGAGTATGA TCTATTTATG ATTACTGAGT TGATTTCTTT CTCGTACACA
GTTGTTGGGA GATATATTAC TTGACCGTTC AAATTCAGCA GTAATGACAC GATACGTGAG CTCAAGAGAC AACTTGAGGA
TTTTAATGAA TCTTCTAAGA GTATGAGCCC TTTACACAAA ACTTGAATGA CGTGCCTTTT TATGTACCTT TGTTTGTGTG
CTTCATCTGT GTCTGCCAAT CCTTATCCAC ACTTGATATA TTTTGCCGTT TTTAACGTGT GGAAGTGCAT CAGTTCCATC
AAATTATCTT CACCCTAGTA CTATTGTAGT TTGTCAAGAT TACAATGGTA AAGATTAATG TTCAAATAAG TTTTGGTGAT
AGTATTATAT ATTGGAGGGA AGATTAAGAA CCTTGGCATG TGTTTAAAGT GGATTTAATG GTCCGTACTG ATTCTTCCTA
CAGGAGTCAA GCAAGAGCAT ACAAATTGAA GCATTTCATG TTTTCAAGGT ATTACTGTAA TAATATTATA CCACACATTT
GGAAATGACT GTTCTGAATC ATGCGTTTAT TGATATCTGC TTGTCACACC AGTTATTTGC TGCTAACCAA CATAAACCAG
CTGATATCGT TAGTATATTT GTCGCAAACA AAAGTAAGAT GCTGAGACTA TTGGAAGACT TCAAAATTGA TAAAGGTAAG
TGATGCCTTC CTCTTTGTGG TATCAATTAT CAGTTTCTCA TGATCACTTA TTTGTTGTGG TTGTGCAGAG GATGAACAAT
TTGAAGCTGA CAAAGCTCAA GTGATGAAGG AAATCGAAGC TCTTTAACCC AGGGAACAAT GCACCTGAAG TGCATATTGT
GTTAAGTAGC ACGTTACCAT GTGGCATTTC ACTTTAGCGA ATTGTGTATT GTAATAGTTA TTAGTTTTTA TCATGATGGG
ACTATCATTT CATACAGACT TTGATGCTTT CTTGCTGTAA TTTTATTACG CCCTTTAAAA ACTGTAGATA AATAAATTGC
TTAATGAGCT ACGTGCGGTT TATTATGTCT TTGTAGGTCT ATAAGTAATA AAGGTATTCG AGGTCATGGA ATCTCAAAAT
ATTTGTTTCG CTAAATTTTG TGTAGTGTTT AGAAAAAGAA AATAAAAAGT TAAGATTAGT TTCCGTAACT TCATAGGGTT
CTCATTTAAT TTGTTCAAGA ATTGAGTTGA TTTTAGTTCA TGGGAGAAGT TTAATTTA

>Vigan.05G092000.01
GTGAGTGTAT TTTGTGTTTG GCTGAAACTG GAGCCAGTAA ATAAAATTTT GATGAATTAC GAAAGCAGGA GGAGGGTTGT
TTTTTCTGGT ATTAGTGTGT GAGGTCCAAT CCCAATCCTC TACCTCATCC TTTTCTTCCA TCCATGTTCA GTTCCTCTAT
AATTCCCCAA CAAAATCTCA GAAGTAAATA AATAAATAAA TAATCATTAT ATTTGGAAAT AATTAAAATA TCCAGATTCA
TCTTGTTCTT ATTTTGCCCA TCCCTTCCAC TCCCTGAGAA TCCCAAACCC TAACTAGACT GTGTGATCAG AGAGAAAAGG
AAAGATTACA CACAGCACTT TGAGAAGATG AAGGGTCTCT TCAAGTCTAA ACCTCGCACT CCTGCAGATG TAGTGCGTCA
CACCAGAGAT CTTCTACTCT TCGTTGATCG GAACTTCGAA TCCCGCGAAA GTAAAAGAGA AGAGAAGCAA ATGTCCGAGC
TATTTAAAAA CGTCAGGGAG CTTAAGCAAA TCCTGTATGG AAATAGTGAT TCTGAACCAG TTGCGGAAGC TTGCGCACAG
TTGACTCAGG AGTTCTTTAA GGAGGACACA TTGCGTCTGT TTATCAAATG TCTTCCAAAA TTGAATCTGG AGGCCAGAAA
AGATGCCACT CAAGTTGTTG CAAATTTACA AAGGCAACAG GTTCAGTTTA AGTTGATTGC ATCTGATTAC CTGGAAAAAA
ATCTGGATCT TATGGATGTC TTGATAGTTG GCTATGAAAA CACAGATATG GCTTTACACT ATGGTGCAAT GCTAAGGGAG
TGTATTCGAC ATCAAATTGT CGCAAAATAT GTTCTCAACT CACCACTTAT GAAGAGATTC TTTGACTATA TCCAACTCCC
AAATTTTGAC ATTGCTGCGG ATGCTGCAGC TACCTTTAAG GAGCTCTTGA CAAGACATAA ATCTACTGTA GCCGAATTCC
TTTCCAAGAA TTATGAATGG TTTTTTGCAG AATATAACAC TAAGCTGTTG GAATCTTCCA ATTACATTAC AAGGCGCCAA
GCTGTCAAGT TGTTGGGAGA TATATTACTT GACCGTTCAA ATTCAGCAGT AATGACACGA TACGTGAGCT CAAGAGACAA
CTTGAGGATT TTAATGAATC TTCTAAGAGA GTCAAGCAAG AGCATACAAA TTGAAGCATT TCATGTTTTC AAGTTATTTG
CTGCTAACCA ACATAAACCA GCTGATATCG TTAGTATATT TGTCGCAAAC AAAAGTAAGA TGCTGAGACT ATTGGAAGAC
TTCAAAATTG ATAAAGAGGA TGAACAATTT GAAGCTGACA AAGCTCAAGT GATGAAGGAA ATCGAAGCTC TTTAACCCAG
GGAACAATGC ACCTGAAGTG CATATTGTGT TAAGTAGCAC GTTACCATGT GGCATTTCAC TTTAGCGAAT TGTGTATTGT
AATAGTTATT AGTTTTTATC ATGATGGGAC TATCATTTCA TACAGACTTT GATGCTTTCT TGCTGTAATT TTATTACGCC
CTTTAAAAAC TGTAGATAAA TAAATTGCTT AATGAGCTAC GTGCGGTTTA TTATGTCTTT GTAGGTCTAT AAGTAATAAA
GGTATTCGAG GTCATGGAAT CTCAAAATAT TTGTTTCGCT AAATTTTGTG TAGTGTTTAG AAAAAGAAAA TAAAAAGTTA
AGATTAGTTT CCGTAACTTC ATAGGGTTCT CATTTAATTT GTTCAAGAAT TGAGTTGATT TTAGTTCATG GGAGAAGTTT
AATTTA

>Vigan.05G092000.01
ATGAAGGGTC TCTTCAAGTC TAAACCTCGC ACTCCTGCAG ATGTAGTGCG TCACACCAGA GATCTTCTAC TCTTCGTTGA
TCGGAACTTC GAATCCCGCG AAAGTAAAAG AGAAGAGAAG CAAATGTCCG AGCTATTTAA AAACGTCAGG GAGCTTAAGC
AAATCCTGTA TGGAAATAGT GATTCTGAAC CAGTTGCGGA AGCTTGCGCA CAGTTGACTC AGGAGTTCTT TAAGGAGGAC
ACATTGCGTC TGTTTATCAA ATGTCTTCCA AAATTGAATC TGGAGGCCAG AAAAGATGCC ACTCAAGTTG TTGCAAATTT
ACAAAGGCAA CAGGTTCAGT TTAAGTTGAT TGCATCTGAT TACCTGGAAA AAAATCTGGA TCTTATGGAT GTCTTGATAG
TTGGCTATGA AAACACAGAT ATGGCTTTAC ACTATGGTGC AATGCTAAGG GAGTGTATTC GACATCAAAT TGTCGCAAAA
TATGTTCTCA ACTCACCACT TATGAAGAGA TTCTTTGACT ATATCCAACT CCCAAATTTT GACATTGCTG CGGATGCTGC
AGCTACCTTT AAGGAGCTCT TGACAAGACA TAAATCTACT GTAGCCGAAT TCCTTTCCAA GAATTATGAA TGGTTTTTTG
CAGAATATAA CACTAAGCTG TTGGAATCTT CCAATTACAT TACAAGGCGC CAAGCTGTCA AGTTGTTGGG AGATATATTA
CTTGACCGTT CAAATTCAGC AGTAATGACA CGATACGTGA GCTCAAGAGA CAACTTGAGG ATTTTAATGA ATCTTCTAAG
AGAGTCAAGC AAGAGCATAC AAATTGAAGC ATTTCATGTT TTCAAGTTAT TTGCTGCTAA CCAACATAAA CCAGCTGATA
TCGTTAGTAT ATTTGTCGCA AACAAAAGTA AGATGCTGAG ACTATTGGAA GACTTCAAAA TTGATAAAGA GGATGAACAA
TTTGAAGCTG ACAAAGCTCA AGTGATGAAG GAAATCGAAG CTCTTTAA

>Vigan.05G092000.01
MKGLFKSKPR TPADVVRHTR DLLLFVDRNF ESRESKREEK QMSELFKNVR ELKQILYGNS DSEPVAEACA QLTQEFFKED
TLRLFIKCLP KLNLEARKDA TQVVANLQRQ QVQFKLIASD YLEKNLDLMD VLIVGYENTD MALHYGAMLR ECIRHQIVAK
YVLNSPLMKR FFDYIQLPNF DIAADAAATF KELLTRHKST VAEFLSKNYE WFFAEYNTKL LESSNYITRR QAVKLLGDIL
LDRSNSAVMT RYVSSRDNLR ILMNLLRESS KSIQIEAFHV FKLFAANQHK PADIVSIFVA NKSKMLRLLE DFKIDKEDEQ
FEADKAQVMK EIEAL*