GBrowse Details

Vigan.05G090600.01

Basic Information:
Name: Vigan.05G090600.01
Multiple alignment
Variant Information
Position: Chr05:6938263..6942331 (- strand)
Length: 4069
Functional Information:
Description: Similar to Uncharacterized protein. [V4W9V5, Citrus clementina.]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:8.47,18.68,14.36,11.50,23.54,20.90,18.42,12.30
Arabidopsis thaliana homolog: AT4G22320.1
Automatic updates:
Name: NM_001248546 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527395 (LOC100527395), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:6938263..6938652 (- strand)
Length: 390
Type: three_prime_UTR
Position: Chr05:6938653..6938790 (- strand)
Length: 138
Type: CDS
Position: Chr05:6939184..6939354 (- strand)
Length: 171
Type: CDS
Position: Chr05:6941686..6942012 (- strand)
Length: 327
Type: CDS
Position: Chr05:6942013..6942331 (- strand)
Length: 319
Type: five_prime_UTR

>Vigan.05G090600.01 class=Sequence position=Chr05:6938263..6942331 (- strand)
AAATTATATA AGAACAGAAG AATTAGGAAG GGTGGATAAA CCTAACCCGA CCCGCTGCAG TATCATCAAT AGGCACTACG
GACGGTCCTG ATTGGCCACA GCATAAACCA GGAGAGGTGA TCTCTGACCC AGACGGTAAG GAAAAGACAG TGTTTTGTAT
TTATGTAGAG AGAGAAAGGG AAAGAAGAAG AGGGTTTTGT AGGGAAGAAA AATTAGAACA AAAATCAAAA TATTTATCTG
AAGAAAAAAG AAATTGAAAA AAGGCGGGTG TTTGTTTTGG TGGAGGCGTG GAGGCGTATC GGAGACAGAT CTGGTATAGA
TGGAGGGAGT TGGGGCCCGA TTAGGGCGGT CCTCGACCCG ATATGGACCG GCCACGGTGT TCACTGGACC GGTGCGGAAG
TGGAAGAAGA AATGGGTCCA TGTATCACCC TCTTCTGCTT CCTCTAATTC TAACACCAAT CACAATCACA ACCACACTCA
TTCTTCCAAC GCCTCTCATC TTCTCCTCTA CAAGTGGACC CCTATCACCC AAAGCCACAA CACCACTACC AACAACTCCA
ACACCGCCAC CGCCAATGGT AACACCAAGG ATGCACAGCC GGAACAACTT GAAGAACCGC CTCGGAGAAA GTTCAAATAT
GTTCCGGTAT TCAAATTACA CTGTTCCCCT AGCTTTTGAA TTATTTTGCT TTAGGGTTTA ATGCATACAT CACTGATATG
TTGGCAAAGT GTGTTTTTAC ATTGGACAGA ATGGATTGCT TGCAGTAGTG ACTACAATGT CCTGATAATT TGTGTCTTAT
TCGGATTATC TTGTTTCCTT ATTGTCCCCT CTTCATGGAG CAGGGTTGAA ACTTGTTTCC TGATATTAAT TTTTTTAATT
AATTTTATTT ATAAAGGTTG TGAATGATAG GAAATGCGGG AACCATGAGA TTAACAAACA ACTGATTCTA AAAGTAGCTT
TTTCTTCTTC TTTTTTTACG GGTTAAGTTT AGCCTGTTGG GATGTTGAGA AACTCAGTCA AATTGGTGGG ATTTAATTTA
AATTGAGATT GAGCCGAATG TGGTTGCTCC GTATAAATGT ACGTTTATCT GAGGATTTGA ATTTTCATGG TAAAGTTTTA
AGTGGGATTA CCAATCAGCC GATCAAGAAG ATGCACTTTT ATTATGTTGG TTTTTTGTAT GACAAAAATA TTAGATATAA
CAAGTTAGTT TTCTAACTCT TACAAAAATA ATTTCTTGGG GAGGGAGGTT AAATTAGCTG GCCATCATTC TATTCCAAAA
TGTTGTCAAA TGAAACTGAC CGCTATGCAA TACTGCATGA ACTATCAGTT GGTAAAAACT GAAGAAACTA GAACCATGGA
TAAGAATAAT GATTTTTTAT CCCCCACCCC ACCTTTCTAC TACTATCCCA AGTGTCCAAG TTCTTTGTTT TAGAAGTGAA
TTTCACTATT TTTTTAATGT GCCAAAGATG GAGTGTTAAG TGTGGTAATT GAAGATGGGA ATTTACCTTT AAACTGGAGG
TGATTAGAAA TGATACAATG AAGGTAATCA ATGAGAAAAC TCAGAAAAGA GGGTTTGTTT TGTCCAAGGC AGGGATTTAG
AAATAAATGA TAACTGCAAG TGTGCAATTT ATATGATAGA TGAAAATAAC AACACTAGTG CATAAGATAA CGTTTCTCAA
TCACTCAAAT ATCTGAACTT TAGTTCTATG AATAAGAAAA AGGGGAGTGA GAACCAAAGT GTTGGACAGC AGGAATGATT
TTATGGTGAA CGAAAGGAAG GATATATTTT CATAGTTATC TGTAGCCCTA GATAGAGTTT AATGGAAAAG GGGGGATCCA
TTTTGTGAGG ACTATGCACA CGGCCAAATT GGTTTTCAAT AATTTGTTTC TATATTCTTG TTTGGGACAG GGGTATCAAC
CTCCCTTGTT GGAAAATGGT TTTTAGCTGA ACTTGCATGT GACTGGAAAC AACATTTTTC TGAGAAATCT TTTTCTTTTA
AAGAATTTTC TCAGAAAATT GAAAAAAGTA AGTGATTATT TGTGAAGAGT TAACTGAAGC AAACATGCAT ACACCTACAG
GTGGATACTT GCCCTTATTT TCTGAACAAT TGTAATATAA TATCATTTCT TGATTAACAT TTGTAGGATT TTTAGTTGAT
CATTTATTTA TAATTGTTTT TTTTCTATTT TAGTATTGCA TTACAATGGC CAGACAACCA GCATAACATA ACAATATTAT
TAATCATAAA GCCCCAATAT TTTCCTCAAA ATATTATCAA CTCAATTTTG CAATGGCATA AATTTTTCTG GTTCTCATAA
ACAGTCACTT ACGGAATAGA TTTGATTTCA AAACCAAATT GATTTAATAA TCTTTCGGTA GCCAACTTGA TGTTCCAAAA
GTCATGAGGG CTAAAATGGA GGTTCACTCT TTTAATTATC TAGATGCATT TGTAGTTTGT TAAATCTAAA GTATGTGTTT
TGCGATCCAT TAATGGTATG ATTTCAGATT GGTGGTCTTG ATGCAGTTTA GCTACATTTT GTCCAAAGAG TTAGCTGTTT
CTTCTCATTA AGTATTCTCG GACATGATTC TGTGGTGTGT TGCCGTAGGT TTATTATAAT GTTGCATGGG GCGTTTTACA
GTTTACTCTA ATGTTGGAAA TGGTGTGTGC AACATGATTC TTGTTTCCTA TGAATGCATT AGCAGAACAA GACCCACCAG
TGATTTTGCT TTGAAATCAA TATTGTCTTT TTGAGTTGTG TATAATTATC ACAGAACTAA TCATGCTCGA CATTATAAAA
TAACTATGCT GTACTAGCCA GAGCTTTTCT TCAATGGTGT ACTTGTAGTC ACACTTGGCA CTATTGATGA ATTGTTCAAA
TTTTCATGCA TTTAGTGTTG ATAATGAATT GATACTATTC TGTCCAATGG CACTGAAGTT GACAAGGGGT GATAACCTGG
GTGGTCTGAT GATACAGGTT GCTTTACTAG AGGAGCAGAG AAATGAGGCT GCTGAAAATG AGGGTGCTGA GAAGCTTGAT
GAGTCTAAAC CAACTGATAC TGATTCGGGT GCAGCAGAGT CAGCTCGCAA GAGTGAAACT TTGGATGAAA AACCTGACAT
AAATGATGTT CCAATGGAAG AAAGTCAGGT AAACCATTGC GTGTTTCTTT GTTTATGTAA TGCTTCTCCA CATTTCGTCC
ATTTCTATAA AGTATTGGCT ACAAAGTAAT AATTGCAGCC CACAAGCATT CTACACCCAC ATAAATTGAT GAATGGGAAT
TATTTATGCA GTTAAAATTT GACAATGACG ATTGATGGTT CTCATCTGTC TTTTTAAATT TTGGACATTT TTTATGCTTC
AAACAAGCAT TAGGCAATTT GAAAAATTAA GGATCGGGCA TTACTATCAT GCAATTCAGT GGTCTGCATG TCTCAAATAT
GTTTTCTGTT ACTAAATTTA AAGTTCACAA CTGATGGACT TGATGCCATT TCGTTTAATA ATGATATGTA AAACTAGTGA
CTTTGGTCTC GTCTTTTTCA GTCTCAGTAC AAAAATCAGG TGGTGCGCCA AGATCTGAAC GAAAGCACGT TGGATTTAAG
TTTGGGCTTG ACATCACACG AAGATGAACA TGATTCTGAT TCAAAACCTA ATCAAACAAG AGATGGCCAG CAACGCTAGT
TAACGTGAGT GGTAATGAAA CATGAACAGG GGTCTCATGA TTCTCCGGTT GGTAAGAACG TAAAAGGTTC AGTCTATACA
TTCGTCTGAT GGAAGGGAAT TGACCCCTGG CTTTATGTTC AACCAATGGT TATTGTAGGT TGGATTATTG TAACGGCATA
TGGCTTTAAT GTGGATTTTT TTTACTCTCT CCTTGCTGCG CTGACCGTAA TTTGTATTGG AGGAACGGAT ATTGTACCCA
TTTTCTCAAT CATTGGACAT ATTTTTGTTC AGATATTTAT TCAAATAGGA TATTCTGGAC TTTGAACCTA CAATCGTGTG
GAGCTACATT GGATTTTTTT AGAAATTAAG ATTCCTCATA AAAAAACAAT CTGTTTCTGT AGTCCTGCT

>Vigan.05G090600.01
AAATTATATA AGAACAGAAG AATTAGGAAG GGTGGATAAA CCTAACCCGA CCCGCTGCAG TATCATCAAT AGGCACTACG
GACGGTCCTG ATTGGCCACA GCATAAACCA GGAGAGGTGA TCTCTGACCC AGACGGTAAG GAAAAGACAG TGTTTTGTAT
TTATGTAGAG AGAGAAAGGG AAAGAAGAAG AGGGTTTTGT AGGGAAGAAA AATTAGAACA AAAATCAAAA TATTTATCTG
AAGAAAAAAG AAATTGAAAA AAGGCGGGTG TTTGTTTTGG TGGAGGCGTG GAGGCGTATC GGAGACAGAT CTGGTATAGA
TGGAGGGAGT TGGGGCCCGA TTAGGGCGGT CCTCGACCCG ATATGGACCG GCCACGGTGT TCACTGGACC GGTGCGGAAG
TGGAAGAAGA AATGGGTCCA TGTATCACCC TCTTCTGCTT CCTCTAATTC TAACACCAAT CACAATCACA ACCACACTCA
TTCTTCCAAC GCCTCTCATC TTCTCCTCTA CAAGTGGACC CCTATCACCC AAAGCCACAA CACCACTACC AACAACTCCA
ACACCGCCAC CGCCAATGGT AACACCAAGG ATGCACAGCC GGAACAACTT GAAGAACCGC CTCGGAGAAA GTTCAAATAT
GTTCCGGTTG CTTTACTAGA GGAGCAGAGA AATGAGGCTG CTGAAAATGA GGGTGCTGAG AAGCTTGATG AGTCTAAACC
AACTGATACT GATTCGGGTG CAGCAGAGTC AGCTCGCAAG AGTGAAACTT TGGATGAAAA ACCTGACATA AATGATGTTC
CAATGGAAGA AAGTCAGTCT CAGTACAAAA ATCAGGTGGT GCGCCAAGAT CTGAACGAAA GCACGTTGGA TTTAAGTTTG
GGCTTGACAT CACACGAAGA TGAACATGAT TCTGATTCAA AACCTAATCA AACAAGAGAT GGCCAGCAAC GCTAGTTAAC
GTGAGTGGTA ATGAAACATG AACAGGGGTC TCATGATTCT CCGGTTGGTA AGAACGTAAA AGGTTCAGTC TATACATTCG
TCTGATGGAA GGGAATTGAC CCCTGGCTTT ATGTTCAACC AATGGTTATT GTAGGTTGGA TTATTGTAAC GGCATATGGC
TTTAATGTGG ATTTTTTTTA CTCTCTCCTT GCTGCGCTGA CCGTAATTTG TATTGGAGGA ACGGATATTG TACCCATTTT
CTCAATCATT GGACATATTT TTGTTCAGAT ATTTATTCAA ATAGGATATT CTGGACTTTG AACCTACAAT CGTGTGGAGC
TACATTGGAT TTTTTTAGAA ATTAAGATTC CTCATAAAAA AACAATCTGT TTCTGTAGTC CTGCT

>Vigan.05G090600.01
ATGGAGGGAG TTGGGGCCCG ATTAGGGCGG TCCTCGACCC GATATGGACC GGCCACGGTG TTCACTGGAC CGGTGCGGAA
GTGGAAGAAG AAATGGGTCC ATGTATCACC CTCTTCTGCT TCCTCTAATT CTAACACCAA TCACAATCAC AACCACACTC
ATTCTTCCAA CGCCTCTCAT CTTCTCCTCT ACAAGTGGAC CCCTATCACC CAAAGCCACA ACACCACTAC CAACAACTCC
AACACCGCCA CCGCCAATGG TAACACCAAG GATGCACAGC CGGAACAACT TGAAGAACCG CCTCGGAGAA AGTTCAAATA
TGTTCCGGTT GCTTTACTAG AGGAGCAGAG AAATGAGGCT GCTGAAAATG AGGGTGCTGA GAAGCTTGAT GAGTCTAAAC
CAACTGATAC TGATTCGGGT GCAGCAGAGT CAGCTCGCAA GAGTGAAACT TTGGATGAAA AACCTGACAT AAATGATGTT
CCAATGGAAG AAAGTCAGTC TCAGTACAAA AATCAGGTGG TGCGCCAAGA TCTGAACGAA AGCACGTTGG ATTTAAGTTT
GGGCTTGACA TCACACGAAG ATGAACATGA TTCTGATTCA AAACCTAATC AAACAAGAGA TGGCCAGCAA CGCTAG

>Vigan.05G090600.01
MEGVGARLGR SSTRYGPATV FTGPVRKWKK KWVHVSPSSA SSNSNTNHNH NHTHSSNASH LLLYKWTPIT QSHNTTTNNS
NTATANGNTK DAQPEQLEEP PRRKFKYVPV ALLEEQRNEA AENEGAEKLD ESKPTDTDSG AAESARKSET LDEKPDINDV
PMEESQSQYK NQVVRQDLNE STLDLSLGLT SHEDEHDSDS KPNQTRDGQQ R*