GBrowse Details

Vigan.04G331900.01

Basic Information:
Name: Vigan.04G331900.01
Multiple alignment
Variant Information
Position: Chr04:45421241..45423261 (- strand)
Length: 2021
Functional Information:
Description: Similar to Uncharacterized protein. [I1NAB3, Glycine max]
GO: Molecular Function: DNA binding (GO:0003677)
Molecular Function: chromatin binding (GO:0003682)
InterPro: SANT/Myb domain (IPR001005)
Homeodomain-like (IPR009057)
Myb domain (IPR017930)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.00,3.33,2.06,6.29,0.80,8.53,1.06
Automatic updates:
Name: DQ822975 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max MYB transcription factor MYB157 (MYB157) mRNA, partial cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:45421241..45421561 (- strand)
Length: 321
Type: three_prime_UTR
Position: Chr04:45421562..45422291 (- strand)
Length: 730
Type: CDS
Position: Chr04:45422596..45422725 (- strand)
Length: 130
Type: CDS
Position: Chr04:45422868..45423003 (- strand)
Length: 136
Type: CDS
Position: Chr04:45423004..45423261 (- strand)
Length: 258
Type: five_prime_UTR

>Vigan.04G331900.01 class=Sequence position=Chr04:45421241..45423261 (- strand)
TTCTTACAAA AGGGTCCTTG TAAAAGGCTG ATAGAAACTT CTATGGGCTA ATCAATTATA TATAATTTTG GAAACTGATA
AGACAATTGA AGTTACAGAG GCTGTTCCCT TTGACTTGTG CCATTTCTTA TCTGAATAAA CTTCTATTCA TGCCCCTCTC
CACGTTCCAT TCTTCACTAT ACCTCTACTT CATACCTTCC TCACAATCCC ACTGAAGAAA CCCAACCCCA GAAAAACAGG
TTTCATACAA AGAGATCCAT GGGTAGAGCT CCTTGCTGTG ACAAGGCAAA TGTAAAGAAA GGACCATGGT CACCAGAAGA
AGATGCAAAG CTAAAGGACT ACATAGACCA ACATGGCACC GGAGGGAATT GGATTGCCCT CCCCCAAAAA GTTGGTAAGT
GCATAACATG ATGACTCATC CTAGCTAGCT ACACTTTCCA AAACTAATGA TGATGGCTAA ACCATGCTTA TATGCAAGGA
TCTTGCTACC CCTTTGTGTT TGTGTTTGTT TTCCTGATTG AGTTTGTTTG TCGCAGGTTT GAAAAGATGT GGCAAGAGCT
GTCGATTAAG GTGGCTTAAT TATCTTAGAC CCAACATCAA GCATGGTCAA TTTTCTGTTG AAGAAGATAA AATAATCTGT
AGCCTCTTTG CTAGCATTGG AAGCAGGTAC ACTCCTTTCA CTCAATTTCC ACATCCTCTC TCACTTTTGA CACTCTCATC
TAATTTGTCA GAGGCTTTAT AAAACCGTAC AAATAATTTC CTTATGTAGA AACAGCCGAA GGGATACATT GGGAAGCATT
TTTTAGTCTT GTTTATGATT TTCGTTTTCA CTTTTGGGAA ATAGATTATG TTTAAGTACG ATACAGATGT GTACTTTGAT
TTTAGATGTT GTGCATCGGT TCATGCATTC CAATTTAGAT CTGGTGTCAG TAAGTTTCTT ATGGTGGGAA GACATTTTCA
CTGGGTGCAG GTGGTCCATA ATAGCATCTC AGCTGCCAGG GAGGACTGAC AATGATATCA AGAACTACTG GAACACCAAG
CTTAAGAAGA AAATGACGGC CATGAATCCT TCTCCCCAGA AGAAGCCTCT TCAAATGACC CTTTTATCCA TCCTTGAAAG
CTCAACACCA TTGTCATTCA GAGACAACAG CAGCAACAAC AACAACTCAT ACTACCATCC CCACGGTTCT TTCACAGGCG
TCGGCTCCTT TTCCTACTCT TCGTGTCTTC TGAGTGGAAA CAACTCTTCC GCTTCTGCTG ATTCCTTCTT TCAAGCACAA
GAGAGTTTCA TGGACCCCAC CCAGAAGGGC CAATTCAAAG GTAGCAGCAG CAGTGGCATG CTTGTGTTCG GTGGTGAAGC
CACAGCCACC AGTTGCAGCT CTTCTGATGC GAGCTGCAAC AACCAGATCA GACAAATCAT GGAGCCAGAA TTTGGCGAGG
CGAGCTTTGT GGAGCAGATA GGTGTTGCTG ATAATCCCCT CTACATTGGG GTGGAAAATA CTACTAACAA GTTGATGATG
TTCTCCAGTG GTGGCAGTGC TAGTGTCAGT GGGTGGACAG ACAAACAAAA TGGATTGTGG GAACAAAATC CGTTGGATTA
TAGTCTAGAG GAAATTAAAC AGCTAATTAG CACTAATAAC AGTTTTAACA ACTTTTTGTT TGATGATAAG AAGACAGAAG
AAAGGTTCAC GTATTACTGA TGCTGACTCC GGTTAGAAAT TAAGAACATC TCAGACTTGT GACTTGGACT GAGTTTGTTT
GTGCCCTTGT GGGGTGGGCT TTTAGCTTTT ACAATCTAGT ATTGAATATA ACCACTTTCT TTGTTTCAAA GCACATTGTA
AAAGCTTCCT TTTTGCAGTT CCCTTGCCAA GGCAACCCTG CCCTTTCAAA CCATAATGAT GTCCTAAAAC ATCTTCCAAA
CATCATATAT AGTTCAGTAA TATTTTTCGC GTATCGCATG CATTATCTAT TATTATATGT CACATGATAT TTTTCTTATA
AAGTCAATCA TGCACCTAAA A

>Vigan.04G331900.01
TTCTTACAAA AGGGTCCTTG TAAAAGGCTG ATAGAAACTT CTATGGGCTA ATCAATTATA TATAATTTTG GAAACTGATA
AGACAATTGA AGTTACAGAG GCTGTTCCCT TTGACTTGTG CCATTTCTTA TCTGAATAAA CTTCTATTCA TGCCCCTCTC
CACGTTCCAT TCTTCACTAT ACCTCTACTT CATACCTTCC TCACAATCCC ACTGAAGAAA CCCAACCCCA GAAAAACAGG
TTTCATACAA AGAGATCCAT GGGTAGAGCT CCTTGCTGTG ACAAGGCAAA TGTAAAGAAA GGACCATGGT CACCAGAAGA
AGATGCAAAG CTAAAGGACT ACATAGACCA ACATGGCACC GGAGGGAATT GGATTGCCCT CCCCCAAAAA GTTGGTTTGA
AAAGATGTGG CAAGAGCTGT CGATTAAGGT GGCTTAATTA TCTTAGACCC AACATCAAGC ATGGTCAATT TTCTGTTGAA
GAAGATAAAA TAATCTGTAG CCTCTTTGCT AGCATTGGAA GCAGGTGGTC CATAATAGCA TCTCAGCTGC CAGGGAGGAC
TGACAATGAT ATCAAGAACT ACTGGAACAC CAAGCTTAAG AAGAAAATGA CGGCCATGAA TCCTTCTCCC CAGAAGAAGC
CTCTTCAAAT GACCCTTTTA TCCATCCTTG AAAGCTCAAC ACCATTGTCA TTCAGAGACA ACAGCAGCAA CAACAACAAC
TCATACTACC ATCCCCACGG TTCTTTCACA GGCGTCGGCT CCTTTTCCTA CTCTTCGTGT CTTCTGAGTG GAAACAACTC
TTCCGCTTCT GCTGATTCCT TCTTTCAAGC ACAAGAGAGT TTCATGGACC CCACCCAGAA GGGCCAATTC AAAGGTAGCA
GCAGCAGTGG CATGCTTGTG TTCGGTGGTG AAGCCACAGC CACCAGTTGC AGCTCTTCTG ATGCGAGCTG CAACAACCAG
ATCAGACAAA TCATGGAGCC AGAATTTGGC GAGGCGAGCT TTGTGGAGCA GATAGGTGTT GCTGATAATC CCCTCTACAT
TGGGGTGGAA AATACTACTA ACAAGTTGAT GATGTTCTCC AGTGGTGGCA GTGCTAGTGT CAGTGGGTGG ACAGACAAAC
AAAATGGATT GTGGGAACAA AATCCGTTGG ATTATAGTCT AGAGGAAATT AAACAGCTAA TTAGCACTAA TAACAGTTTT
AACAACTTTT TGTTTGATGA TAAGAAGACA GAAGAAAGGT TCACGTATTA CTGATGCTGA CTCCGGTTAG AAATTAAGAA
CATCTCAGAC TTGTGACTTG GACTGAGTTT GTTTGTGCCC TTGTGGGGTG GGCTTTTAGC TTTTACAATC TAGTATTGAA
TATAACCACT TTCTTTGTTT CAAAGCACAT TGTAAAAGCT TCCTTTTTGC AGTTCCCTTG CCAAGGCAAC CCTGCCCTTT
CAAACCATAA TGATGTCCTA AAACATCTTC CAAACATCAT ATATAGTTCA GTAATATTTT TCGCGTATCG CATGCATTAT
CTATTATTAT ATGTCACATG ATATTTTTCT TATAAAGTCA ATCATGCACC TAAAA

>Vigan.04G331900.01
ATGGGTAGAG CTCCTTGCTG TGACAAGGCA AATGTAAAGA AAGGACCATG GTCACCAGAA GAAGATGCAA AGCTAAAGGA
CTACATAGAC CAACATGGCA CCGGAGGGAA TTGGATTGCC CTCCCCCAAA AAGTTGGTTT GAAAAGATGT GGCAAGAGCT
GTCGATTAAG GTGGCTTAAT TATCTTAGAC CCAACATCAA GCATGGTCAA TTTTCTGTTG AAGAAGATAA AATAATCTGT
AGCCTCTTTG CTAGCATTGG AAGCAGGTGG TCCATAATAG CATCTCAGCT GCCAGGGAGG ACTGACAATG ATATCAAGAA
CTACTGGAAC ACCAAGCTTA AGAAGAAAAT GACGGCCATG AATCCTTCTC CCCAGAAGAA GCCTCTTCAA ATGACCCTTT
TATCCATCCT TGAAAGCTCA ACACCATTGT CATTCAGAGA CAACAGCAGC AACAACAACA ACTCATACTA CCATCCCCAC
GGTTCTTTCA CAGGCGTCGG CTCCTTTTCC TACTCTTCGT GTCTTCTGAG TGGAAACAAC TCTTCCGCTT CTGCTGATTC
CTTCTTTCAA GCACAAGAGA GTTTCATGGA CCCCACCCAG AAGGGCCAAT TCAAAGGTAG CAGCAGCAGT GGCATGCTTG
TGTTCGGTGG TGAAGCCACA GCCACCAGTT GCAGCTCTTC TGATGCGAGC TGCAACAACC AGATCAGACA AATCATGGAG
CCAGAATTTG GCGAGGCGAG CTTTGTGGAG CAGATAGGTG TTGCTGATAA TCCCCTCTAC ATTGGGGTGG AAAATACTAC
TAACAAGTTG ATGATGTTCT CCAGTGGTGG CAGTGCTAGT GTCAGTGGGT GGACAGACAA ACAAAATGGA TTGTGGGAAC
AAAATCCGTT GGATTATAGT CTAGAGGAAA TTAAACAGCT AATTAGCACT AATAACAGTT TTAACAACTT TTTGTTTGAT
GATAAGAAGA CAGAAGAAAG GTTCACGTAT TACTGA

>Vigan.04G331900.01
MGRAPCCDKA NVKKGPWSPE EDAKLKDYID QHGTGGNWIA LPQKVGLKRC GKSCRLRWLN YLRPNIKHGQ FSVEEDKIIC
SLFASIGSRW SIIASQLPGR TDNDIKNYWN TKLKKKMTAM NPSPQKKPLQ MTLLSILESS TPLSFRDNSS NNNNSYYHPH
GSFTGVGSFS YSSCLLSGNN SSASADSFFQ AQESFMDPTQ KGQFKGSSSS GMLVFGGEAT ATSCSSSDAS CNNQIRQIME
PEFGEASFVE QIGVADNPLY IGVENTTNKL MMFSSGGSAS VSGWTDKQNG LWEQNPLDYS LEEIKQLIST NNSFNNFLFD
DKKTEERFTY Y*