GBrowse Details

Vigan.04G330900.01

Basic Information:
Name: Vigan.04G330900.01
Multiple alignment
Variant Information
Position: Chr04:45323109..45325644 (+ strand)
Length: 2536
Functional Information:
Description: Similar to membrane magnesium transporter-like. [XP_004493991.1, Cicer arietinum]
InterPro: Magnesium transporter (IPR018937)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:52.93,65.77,39.88,33.52,52.06,92.28, 54.12,37.04
Arabidopsis thaliana homolog: AT5G03345.1
Automatic updates:
Name: NM_001251484 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100499690 (LOC100499690), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001251484 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100499690 (LOC100499690), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:45323109..45323207 (+ strand)
Length: 99
Type: five_prime_UTR
Position: Chr04:45323208..45323280 (+ strand)
Length: 73
Type: CDS
Position: Chr04:45323379..45323431 (+ strand)
Length: 53
Type: CDS
Position: Chr04:45323510..45323610 (+ strand)
Length: 101
Type: CDS
Position: Chr04:45325027..45325120 (+ strand)
Length: 94
Type: CDS
Position: Chr04:45325121..45325644 (+ strand)
Length: 524
Type: three_prime_UTR

>Vigan.04G330900.01 class=Sequence position=Chr04:45323109..45325644 (+ strand)
TTGTGACCGA GGATTGGGTA GAACTGAGAT TGGCGTTTGT GACCGGCGAT TGAAAACCCT TTGAAGGTGT TTCAGAGGGA
GACGAAGAAG ATCGTATAAA TGGGTCTAGC TTTAACCGTC GGTGTCTTCG GTGTTCTGGT TCTATTTCAC GCCGCTTATT
CAACTATCCA CTGTATTCTA CAACTCATTC TTACGATTGT TTTTCTTTTT ATTATGTATT TGAGCGTTAG GGCTCGTGGA
TCTGAAATTG GATCTGTTTT TTTGTTCCAG ACAGGGGTCT GTTGAAGATT ACAGAGGAGG AGTTTTCAGG GCCTCCATTT
AACGTAATTT GATTAACGCT GCAATCTAGG GTTTAATTTC ATGTACTGTA TCTAATTTTA CTTTTTTTGG GAATAATGCA
GGTGGTGATT GAGCTGTTTG TTGGGCTGCT GCTTTGTTTC TGGGCTGCGC TCACTGTGCC CGGGAATTTT AAATCCATAC
TCCCTCACTC CGAGGAGAAC AGGTAACTAA AATTAATGTT AGGATGTATG TAGCTGTAAC CAGATGAATA TGAACTGATG
AAACTGATTG TGAAATATCA TCTCTTATTT CTTATTTTTT GTTTGGATTA GATGTGGTGA ATGGTCTTCT AAGAGAATTG
AATTTTTAAT TATTAGTTTT GGAAGATTGA ACTTTATGTT AGGTACCCTG TGATAAGGAA ATAAAGAGAA AAATATGAAA
TAAGATTATG CACGAGCTAT AATTAGCTCG TCAGTAAGCT AATTTCTAGA AGTTCTTTCA TACTAGTTTT TTTAAAAGTT
GATTTTTAGA TTATGTTTTA GTTAATTTTA CCTTATGAAG TAATTTATTG TATTTTTCTT TTCCTCTGGA AACGTTTATC
AGAGGATATA TTGTACTAAG TTAAGTTTCT CACATTTGGG GCTGTTTTTG GCTTCTGTCA TTTTATTTTG TTATTTTCGC
GTGTTTTGAT CTCACGTTAG AGGCTTAATT TGCTAGGATT ATGATTAATC AATGCAAATC TCTTGTGATT TTCCTGTTAT
ATTATATACC AATCAAATCT TTTGTTTTCT ATCATGCTTT ACGAAGTGGA TGTCTTCCAT GATGGTTTAG AATGGAGATT
CTAGGAGGTA TGGTCTGGAT GTATGAACCC AATAATTGTT GATATGTCTT CATTGATTGA AATATCAAGC TAGAGGAGAA
CCCAGATCTC GAGTGCCTGG CTCAAGGGTC ATTTCATCTG CACTATCGTT GTGTCTTCAA TTTTGCTTCT GATCTTGTAT
TTCATTGATA CATATCAAGA AATAGGGATT TTTTTTGTCA ATGTACACTG TTTTATTTTC CATACTCTAA TCCAGTTCTG
TTACCGGAGT TCATTATTAG GGGCCACTTA AGTTACTCCT GTCAAGTTCT GCATTCATAC TGTGTTGGTA GATTATGGGT
GGCTGGGTTT GATTTGACTA ATGTACTCAC TATAAACATC ATTAATAAAA AATGAGAAAG AAAAAGGGGA ATTTTATGCA
CGTAGATTAT ACTTAACATT GACGTAGTTT TTAGTTCTTT TTATCTAAAA AATTCAGATG TGTTCAAATA GAATAGAAGT
TTATTTAATG GAATCCTGAA TAAACATACT GTTTGGGCTC TATAGGGACC CACTTATTTC ATTTACCTTT ATAAATTTGA
AGGGTCTAAC GTCAAAATTC CTGATCATAT TGTCACTTGG GTATTTAGCT ATTTATGTAA GGGCACTTAT CTGAAAAGTT
TTTCTTGAAA ACCATTGTAA TTTCTTTGGT TGTGTTGTTC GCTTGGTTGA GGGATATGCC TTCATGTAGT AGTCCTATAC
ACTGGCACTA GTGGCAAATA TTACATATTA TGGAATTATG TGGATCCCCA TAACCTGATT TTCTCTCCTT GGATGCAGGA
TTGTTTCTTT ACCTGCCAAC CTAGACTTCA TGATCTTCAA TCACCGAGGC AAGGTCTTTC CTGTGGAACT GGATGTGAAG
CTGAGACAAT GAGGACTGCT ATCCTTCACA CGAGGAGGAA AAACTTTACT CTAGAAAATT AAAAATTTGG GATGCGCGTT
TGAATATCCG TTGTTTGATG CATGAGTCTA GCAGTTTTCT TCTGTATCTT GTACTTTCTT TACTGACCAC TTGACATAGT
AATTTAGACA GGATGTTATT ATTTGAATCA TACATATGAA GAGTTAGCTT GCACTTTCAA CCATGTCCAC AAAAAATTAT
TTGCTACATT AGGCGTCAAG TAAACATTCT AGGGGAGTTA TATGCTTTGA CTGTCGAAAT GATAGCAAGT TATCTCATTC
ATTTAGAAGA ATGAGTCCTC CAGTGTGTGG TGATTACAAA TAATTTTGCT CAATAGGATA ATAAAATGGG GTGTTCAATT
CAAAGCTGGT GTTGCAAGGA TGTGAATTTT GATTTGGGAA TTGATGGATA TTAACGTAGA AGTCTTGAAT TCAAGATGAA
GTTATATCTT TGCATATGCG ATTCACATAT TTCAGCCCTA GTTAGGCAAA TACAAG

>Vigan.04G330900.01
TTGTGACCGA GGATTGGGTA GAACTGAGAT TGGCGTTTGT GACCGGCGAT TGAAAACCCT TTGAAGGTGT TTCAGAGGGA
GACGAAGAAG ATCGTATAAA TGGGTCTAGC TTTAACCGTC GGTGTCTTCG GTGTTCTGGT TCTATTTCAC GCCGCTTATT
CAACTATCCA CTACAGGGGT CTGTTGAAGA TTACAGAGGA GGAGTTTTCA GGGCCTCCAT TTAACGTGGT GATTGAGCTG
TTTGTTGGGC TGCTGCTTTG TTTCTGGGCT GCGCTCACTG TGCCCGGGAA TTTTAAATCC ATACTCCCTC ACTCCGAGGA
GAACAGGATT GTTTCTTTAC CTGCCAACCT AGACTTCATG ATCTTCAATC ACCGAGGCAA GGTCTTTCCT GTGGAACTGG
ATGTGAAGCT GAGACAATGA GGACTGCTAT CCTTCACACG AGGAGGAAAA ACTTTACTCT AGAAAATTAA AAATTTGGGA
TGCGCGTTTG AATATCCGTT GTTTGATGCA TGAGTCTAGC AGTTTTCTTC TGTATCTTGT ACTTTCTTTA CTGACCACTT
GACATAGTAA TTTAGACAGG ATGTTATTAT TTGAATCATA CATATGAAGA GTTAGCTTGC ACTTTCAACC ATGTCCACAA
AAAATTATTT GCTACATTAG GCGTCAAGTA AACATTCTAG GGGAGTTATA TGCTTTGACT GTCGAAATGA TAGCAAGTTA
TCTCATTCAT TTAGAAGAAT GAGTCCTCCA GTGTGTGGTG ATTACAAATA ATTTTGCTCA ATAGGATAAT AAAATGGGGT
GTTCAATTCA AAGCTGGTGT TGCAAGGATG TGAATTTTGA TTTGGGAATT GATGGATATT AACGTAGAAG TCTTGAATTC
AAGATGAAGT TATATCTTTG CATATGCGAT TCACATATTT CAGCCCTAGT TAGGCAAATA CAAG

>Vigan.04G330900.01
ATGGGTCTAG CTTTAACCGT CGGTGTCTTC GGTGTTCTGG TTCTATTTCA CGCCGCTTAT TCAACTATCC ACTACAGGGG
TCTGTTGAAG ATTACAGAGG AGGAGTTTTC AGGGCCTCCA TTTAACGTGG TGATTGAGCT GTTTGTTGGG CTGCTGCTTT
GTTTCTGGGC TGCGCTCACT GTGCCCGGGA ATTTTAAATC CATACTCCCT CACTCCGAGG AGAACAGGAT TGTTTCTTTA
CCTGCCAACC TAGACTTCAT GATCTTCAAT CACCGAGGCA AGGTCTTTCC TGTGGAACTG GATGTGAAGC TGAGACAATG
A

>Vigan.04G330900.01
MGLALTVGVF GVLVLFHAAY STIHYRGLLK ITEEEFSGPP FNVVIELFVG LLLCFWAALT VPGNFKSILP HSEENRIVSL
PANLDFMIFN HRGKVFPVEL DVKLRQ*