GBrowse Details

Vigan.04G312300.01

Basic Information:
Name: Vigan.04G312300.01
Multiple alignment
Variant Information
Position: Chr04:43629954..43633106 (- strand)
Length: 3153
Functional Information:
Description: Similar to Uncharacterized protein. [I1JP67, Glycine max]
GO: Molecular Function: acid phosphatase activity (GO:0003993)
InterPro: Acid phosphatase (Class B) (IPR005519)
Acid phosphatase, plant (IPR010028)
Vegetative storage protein/acid phosphatase (IPR014403)
HAD-like domain (IPR023214)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.03,0.04,11.76,2.79,0.52,27.02,14.98,32.09
Arabidopsis thaliana homolog: AT1G04040.1
Automatic updates:
Name: NM_001255316 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max haloacid dehalogenase-like hydrolase (LOC100811100), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:43629954..43630511 (- strand)
Length: 558
Type: three_prime_UTR
Position: Chr04:43630512..43630689 (- strand)
Length: 178
Type: CDS
Position: Chr04:43631308..43631517 (- strand)
Length: 210
Type: CDS
Position: Chr04:43632444..43632880 (- strand)
Length: 437
Type: CDS
Position: Chr04:43632881..43633106 (- strand)
Length: 226
Type: five_prime_UTR

>Vigan.04G312300.01 class=Sequence position=Chr04:43629954..43633106 (- strand)
TTAAACTATA ATGTTGAACA ATTCACACTG TCTTTATGTA AATTTTACAT CATCTGTCAA ATTTCTACAC ACAAAATCAA
AAGGTGTATT AATGTGTTGG ACAAGAGCAT CACCTAGCTA ATATATCTCA CCGTGTCCCA CACTCCATTT CACGCCTATA
TGTATTTTCT TTACTCAGTT TCCTTTTCAC TGAATTCTTA CATCCCTCTC TGTCTCTTGT GTGCAAATGG CCAAGTGTCT
GGCACTCTCT CTGATCATAT TAGGCCTCTT CATTGGGTTG GTGAGTCCAC AATGGAACAT ACTGAACCTA GGATGGGGGA
AAAGGGTTGA GGAAGTGAAT CCAGAATGGA ACATACTGAA CCATATATTG AGAGAGAAAG TGGTTGGAGA CAACTTGAAG
AACTACTGTG AGAGTTGGAG GATCAATGTT GAACTAAACA ACATTAGAGG GTTCAGTGTT GTGCCTCAAG AATGTGTGGA
GCACGTGAAG AAGTACATGA CTTCATCTCA GTACAAAGCT GACTCTATGA GGGCAGTGGA GGAGATTAGG CTCTATCTCA
GTGGGTGCTG CACTTCGAAA GGTGATGGCA AAGATTCCTG GATTTTTGAT ATTGATGAGA CCCTTTTGTC CACAATTCCT
TATTATAAGA AGCATGGTTT TGGGTAAGTG ACTAACACTT CTAAGCCTTT TGTTTTTATT ATATATATAC ATAGTGCACA
CACATGTGAT TAACTTTTGG TGTTACTCTA ATCTGGTATA ATCATGGGAA CCGTTCAGAT TTCAAACATT AACTAGTTTA
TAGTAACCAT GATGACTATG ACTAGGTGTC AACAATGCAC TCAGAACATT GAATTAATCT CGTGAAAAAG CTGATATTGT
TGTTTAATGT TTATTGGAAT CATGTCTGGG CTACATTTTT TCATCAGATT TGTTACTTAA AATGTTGTCA TGCTGTCTCT
TGAGTAGATT CAGTTGCTGC TGTTTTTGTC CAAGGGTGCA AAACTGGTTC ATGTCATTAA TGGTTAAGAT GTGGTGGAAT
CAATTCAGTT TTGTGGTTCA ATTTGTTTAT TTTGTGTTGT GTCTTTTACC AAGGAAGTGC AATCTGTGAT GCGTCATACA
GTGACGTGTG TAAGTCACTC CATACATTCT TTTATTTCCA CTGACGAAAG TTCTCAAAGT TGTTCCTAGA ATTTGGCCAA
AATTCCGTCT TTGTTAAGAT TCTTCAAAGA AAGAAAGGTG AATTAGGTTA CTAGCTAATC TGACGTAGCC AAAAGAACAA
ATCTACTTCA ATTTGAATGG AAAAAGGTGT AAAAAGTTGG TATCTAGTTT TGAAATACAT GAAATGAAAT CAAGAGTTGC
ACATAATTGG TTAATGTTTG GATTCAAGAT TATATTGTTT GAGTTTGTTC TGTAACGATA TCATTATCTA ATCAGACTTT
ACTTACTTCT TAATCTTGTT AGATTAGTTT AAGGCAAAGC TTTGAAATGC AGAGTGAATG ATGTCTAATG GACAATTTTC
TTTTGAAGTT GTTGATTATT AAATCCATTG TGTTAGTTGT TGATTATTAT TAACATTAAA ATATATTAGG GGAGAAAAGT
TGAATTTAAC ATCTTTAGAA GCATGGATGA AGCAAAGCAA GGCACCAGCT CTTGATCACA CATTGGAGCT CTTTCATGAA
ATAAAGAACA GAGGCTTCAA AATCTTTCTG GTTTCTTCAA GAAAGGAAAG CCTTAGATCT GCCACAGTAG ACAACCTAGT
CAATGTTGGG TACCATGGTT GGACTACTCT TAAATTGAGG TAATTAATTC ATTATTTTCA CTCTATATTT ACTCATGAAA
TTAATCTCCT AATAACGATA ATTTATAAAG TCAATTTGAA ATTATATTTC TTATTAATTT TTATACAACT TTTAATATAA
AGTAATATTA TTATTTTTTG TTTAATTAAT AGTTGGTTTC AATATTTAAG TCTATTGTTC ACGTTTCCTA TATTTAGGTC
TATGATTTAT TTTATACTCT ATAATTTTTT TTACTCAATT AAGTATCAAT AATTTTTAAA TAGAATCGAT ATAATCTCTT
TTCTTAAATT GACATGTTAT TTTTGTTTGA AAAGTATCAT GGGTCTAAAA TAAGAGATTT TAATATAAAA CATGATTTTG
ACATGTGTTG TGTTAACATC AATTTAGTGA AAATGATTAC ATTGACTATT TAAAATATAT TATAATTAAA TTGAGTGAAA
AAAATACATA AAATCAAAAT GAATCATAAA GGTATAATAA ATTATTAAGT AAGTTTATTT TCATTTTATA AATGTTAATA
AATATTTTAG GAATGTTCTT AATTGTTTAA TTTAATTCTA TGCTTACCTT AACATGGTGA AATGGATTAT CCCTAAGAAA
ATTGAATAAC TTGGCAGGGG TTTTGATGAT GAATTGGTGG AAGTAAAAAA GTACAATTCT AAGGTGAGAC AAGAATTGGT
TGACGAGGGT TATCGCATAT GGGGCATTGT TGGAGATCAA TGGAGCACTT TTGATGGACT TCCTATCCCA AACAGAACAT
TCAAATTACC AAATTCCATT TACTACAAAG CATAAATTTC TTACTCTCTA CCACTTATAT ATAAAAAAGC TTTTACCTTT
ATCACCATCA CCACAAGCTT TTGTCCCTTC ATCTATGTCA AAGGTTTATC AAATGGAACT CTTCTTACTC CATTGTGAAA
CAAAAAAACA TGTGGGAAAA GAAAAAAAGC TATTTATTAA AAAGGGTCAT GCTAGCTTTA AAGAATTCTA TTTTCTACTT
TTCTTCTTCA CTAGGAATAG ATGCTATGTA AAATACATAA AAGCAACTTT CAAGTGTTGA TGACATGGTT TTCAATATGT
TTTTGAACAT CTAATATTTA TAGATTTCAT TGATCACTAC TTATTGTAAA ACAAATTGAT TGATTGGTTT TAGTGTGGTG
TTGACTTTCA ATTATGTTGT TTAAAGTGGG TATTTGATAC TTTGAAATAA TCATAACAAT TTTAATTGGG TTGTAAAACG
GATTAACGTA ATAATTAAGG TTAATACTAA AATGTGGAAA TAATGTGGTC CCATGGCCCA AATCCTTTTC ATTTTCTCAA
GTTGCTTGTT TTCTAGCTGT ATTAATATCA AAT

>Vigan.04G312300.01
TTAAACTATA ATGTTGAACA ATTCACACTG TCTTTATGTA AATTTTACAT CATCTGTCAA ATTTCTACAC ACAAAATCAA
AAGGTGTATT AATGTGTTGG ACAAGAGCAT CACCTAGCTA ATATATCTCA CCGTGTCCCA CACTCCATTT CACGCCTATA
TGTATTTTCT TTACTCAGTT TCCTTTTCAC TGAATTCTTA CATCCCTCTC TGTCTCTTGT GTGCAAATGG CCAAGTGTCT
GGCACTCTCT CTGATCATAT TAGGCCTCTT CATTGGGTTG GTGAGTCCAC AATGGAACAT ACTGAACCTA GGATGGGGGA
AAAGGGTTGA GGAAGTGAAT CCAGAATGGA ACATACTGAA CCATATATTG AGAGAGAAAG TGGTTGGAGA CAACTTGAAG
AACTACTGTG AGAGTTGGAG GATCAATGTT GAACTAAACA ACATTAGAGG GTTCAGTGTT GTGCCTCAAG AATGTGTGGA
GCACGTGAAG AAGTACATGA CTTCATCTCA GTACAAAGCT GACTCTATGA GGGCAGTGGA GGAGATTAGG CTCTATCTCA
GTGGGTGCTG CACTTCGAAA GGTGATGGCA AAGATTCCTG GATTTTTGAT ATTGATGAGA CCCTTTTGTC CACAATTCCT
TATTATAAGA AGCATGGTTT TGGGGGAGAA AAGTTGAATT TAACATCTTT AGAAGCATGG ATGAAGCAAA GCAAGGCACC
AGCTCTTGAT CACACATTGG AGCTCTTTCA TGAAATAAAG AACAGAGGCT TCAAAATCTT TCTGGTTTCT TCAAGAAAGG
AAAGCCTTAG ATCTGCCACA GTAGACAACC TAGTCAATGT TGGGTACCAT GGTTGGACTA CTCTTAAATT GAGGGGTTTT
GATGATGAAT TGGTGGAAGT AAAAAAGTAC AATTCTAAGG TGAGACAAGA ATTGGTTGAC GAGGGTTATC GCATATGGGG
CATTGTTGGA GATCAATGGA GCACTTTTGA TGGACTTCCT ATCCCAAACA GAACATTCAA ATTACCAAAT TCCATTTACT
ACAAAGCATA AATTTCTTAC TCTCTACCAC TTATATATAA AAAAGCTTTT ACCTTTATCA CCATCACCAC AAGCTTTTGT
CCCTTCATCT ATGTCAAAGG TTTATCAAAT GGAACTCTTC TTACTCCATT GTGAAACAAA AAAACATGTG GGAAAAGAAA
AAAAGCTATT TATTAAAAAG GGTCATGCTA GCTTTAAAGA ATTCTATTTT CTACTTTTCT TCTTCACTAG GAATAGATGC
TATGTAAAAT ACATAAAAGC AACTTTCAAG TGTTGATGAC ATGGTTTTCA ATATGTTTTT GAACATCTAA TATTTATAGA
TTTCATTGAT CACTACTTAT TGTAAAACAA ATTGATTGAT TGGTTTTAGT GTGGTGTTGA CTTTCAATTA TGTTGTTTAA
AGTGGGTATT TGATACTTTG AAATAATCAT AACAATTTTA ATTGGGTTGT AAAACGGATT AACGTAATAA TTAAGGTTAA
TACTAAAATG TGGAAATAAT GTGGTCCCAT GGCCCAAATC CTTTTCATTT TCTCAAGTTG CTTGTTTTCT AGCTGTATTA
ATATCAAAT

>Vigan.04G312300.01
ATGGCCAAGT GTCTGGCACT CTCTCTGATC ATATTAGGCC TCTTCATTGG GTTGGTGAGT CCACAATGGA ACATACTGAA
CCTAGGATGG GGGAAAAGGG TTGAGGAAGT GAATCCAGAA TGGAACATAC TGAACCATAT ATTGAGAGAG AAAGTGGTTG
GAGACAACTT GAAGAACTAC TGTGAGAGTT GGAGGATCAA TGTTGAACTA AACAACATTA GAGGGTTCAG TGTTGTGCCT
CAAGAATGTG TGGAGCACGT GAAGAAGTAC ATGACTTCAT CTCAGTACAA AGCTGACTCT ATGAGGGCAG TGGAGGAGAT
TAGGCTCTAT CTCAGTGGGT GCTGCACTTC GAAAGGTGAT GGCAAAGATT CCTGGATTTT TGATATTGAT GAGACCCTTT
TGTCCACAAT TCCTTATTAT AAGAAGCATG GTTTTGGGGG AGAAAAGTTG AATTTAACAT CTTTAGAAGC ATGGATGAAG
CAAAGCAAGG CACCAGCTCT TGATCACACA TTGGAGCTCT TTCATGAAAT AAAGAACAGA GGCTTCAAAA TCTTTCTGGT
TTCTTCAAGA AAGGAAAGCC TTAGATCTGC CACAGTAGAC AACCTAGTCA ATGTTGGGTA CCATGGTTGG ACTACTCTTA
AATTGAGGGG TTTTGATGAT GAATTGGTGG AAGTAAAAAA GTACAATTCT AAGGTGAGAC AAGAATTGGT TGACGAGGGT
TATCGCATAT GGGGCATTGT TGGAGATCAA TGGAGCACTT TTGATGGACT TCCTATCCCA AACAGAACAT TCAAATTACC
AAATTCCATT TACTACAAAG CATAA

>Vigan.04G312300.01
MAKCLALSLI ILGLFIGLVS PQWNILNLGW GKRVEEVNPE WNILNHILRE KVVGDNLKNY CESWRINVEL NNIRGFSVVP
QECVEHVKKY MTSSQYKADS MRAVEEIRLY LSGCCTSKGD GKDSWIFDID ETLLSTIPYY KKHGFGGEKL NLTSLEAWMK
QSKAPALDHT LELFHEIKNR GFKIFLVSSR KESLRSATVD NLVNVGYHGW TTLKLRGFDD ELVEVKKYNS KVRQELVDEG
YRIWGIVGDQ WSTFDGLPIP NRTFKLPNSI YYKA*