GBrowse Details

Vigan.04G264700.01

Basic Information:
Name: Vigan.04G264700.01
Multiple alignment
Variant Information
Position: Chr04:38502826..38508092 (+ strand)
Length: 5267
Functional Information:
Description: Similar to Protein kinase. [A2Q2Z4, Medicago truncatula]
GO: Biological Process: mitochondrial fission (GO:0000266)
Molecular Function: protein binding (GO:0005515)
InterPro: Tetratricopeptide-like helical (IPR011990)
Mitochondria fission 1 protein (IPR016543)
Fis1, N-terminal tetratricopeptide repeat (IPR028058)
Fis1, C-terminal tetratricopeptide repeat (IPR028061)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:48.51,39.78,9.63,6.58,20.32,16.91,11 .94,8.63
Arabidopsis thaliana homolog: AT3G57090.1
Structure :
Position: Chr04:38502826..38503009 (+ strand)
Length: 184
Type: five_prime_UTR
Position: Chr04:38503010..38503090 (+ strand)
Length: 81
Type: CDS
Position: Chr04:38503620..38503758 (+ strand)
Length: 139
Type: CDS
Position: Chr04:38504699..38504820 (+ strand)
Length: 122
Type: CDS
Position: Chr04:38507443..38507506 (+ strand)
Length: 64
Type: CDS
Position: Chr04:38507592..38507677 (+ strand)
Length: 86
Type: CDS
Position: Chr04:38507678..38508092 (+ strand)
Length: 415
Type: three_prime_UTR

>Vigan.04G264700.01 class=Sequence position=Chr04:38502826..38508092 (+ strand)
AAATTTGAAA TCAGACAAGC GTATTTGAAC ATTATTCAAT GTGTAAACGC AATATATAAT AAAAATATAT TTGTCATTTT
GTAAGGTTTG TTTGTACTAA AAAGATAGTT CGAAATTCCA AAAATCCCAA ACCTATAAAT ACCATTGGGT ATTCAGTTAC
CGTTTCTGTG GTGTGGACGC CAAAATGGGA AGCCTACTCG AGTCCATCGG AAATTTCTTC ACCGGCGGCG AACAGATCCC
GTGGTGCGAC CGTGACGTCA TTGCTGTAAT CTACCTTCAT TTCGATTTCC TTTCTTCCAA CATTCCCTTC TCTTCTTTAT
GTTTTCAATT CTTGGTTTCT TCATTTTAAA ACCCTAGTTT TACAACCAGA AATTCGAATG TGTAAGGATT GATGATTTTT
CTAGACGATA ATTGGTTTCA TTTCAGTGTG TGTTAATTCG TGGCTGATTT GTTTTGAATG AATATCTTAT CGGATGGGTC
GAATATATGT TTTTTCAGAG ACATTTCCTT GAATTGATCT TGGATCTTTA TTTTTTTTTC TTTTTTCCTG AAGTGCTTAA
CCTTTGGTAA TTAGATTTTA AAAGGATTTA AATTGAGTAG AAATGGAGGA AATTTTATTG ATTATTCTCC GGTTAATCAG
TTATGGCGGT GGTGATTGCC GTGGGGATTA TGAATACACT GTTTGACTTG TCCCTGTAGG TTGTGGTGAA TTGGCTTGGA
TTTGGTGTAG GAGTGTAGCC TCTGGTGTTA TTTGCTTTCC TATTCTCAGT ATTGACTATT TACATGTTTT GAAGGGCTGT
GAGAGAGAAG TTGCAGAGGC TGCTCGTGGT GACTCTGAGG AGCGGAAGAA TGAGAGTATA ATGAGGTTGT CGTGGGCTCT
TGTTCATTCA AGGCAAAAGG AAGATGTTCA GCGCGGAATA GCCATGCTTG AAAGTACTGT AGATTACAGA ATTATACCTT
GATCTGCTTT TAAAATGGTT TTAAGTGGTT AATACTTTTT ACTTATTCTT TGGCACTAAC CATTTATAAA CTTGTGATAG
AAGTTATATT TTCTGTTTTT ACGATGCTTC CAAAATCAGT TGCATGTTTT CAGTTTATAT TCTGAAGGCT CTGTAAAGTG
CAGCAGTTTA AAAGACATCT TATTAGTTTC TGTTTTTCAC TGGTTGAGCT TAATCATCTT ATCTGAGTGC CCCATCTCCT
TTATCCCTGG ATTTCATGAG TCATGACATC TCAAAACTGT AGTGCATAAT TAATTTAAAA GTCTTGGTTA TTAGCTCCGA
TTCCTCAGCT CATTATGGCA AAATTAATGA AAGGTCACTC GGCATAAAGC AACCCAATTG TTAGTTATGT GATTATTTTA
CCAGCCTGAT GGATAATTCA AAATAAGCCA AAATATCAAA TGCAAGGCTT TTTTTGAATG GTCTCCAGAA TCTCTCTGGT
GTTGGCACTG GGGTCGTTGT GGCGTTGTGG CGTTGTGGCT TTCTATAGTT ATTGTGCAAA CTTTAATGTA ATATGGTGAA
CTTCATAAAC TATCATTTTC AAGGCAGCTT TTTAACCAAG GCCTTTAAGA TATCTCAATT TTCCCATAGC CATTTATGTT
CACTCCAAAT AAAATCACTG GAAAAGTCGT TGTGGTTTCT TTATTAAAGG ACTATGTATT TGGCCTTTTA AATTGCAATT
TCTTTTTAAT GAAAAAGGAT AGCCTTGACC TGCTAATGCT GCTGTGTTCT GGCAATTGCC ACCATGGCCA CAACCTATTC
TACTTTTTCT ATTGCTTTTC TAATATATTA TTCAGATGTT TGATATTAAA ATATTCTGAG CCTGACCTTT ATATCCATGG
ATAAGCTTTT ACATCCTTAA TTATGATTTG CAGCTTCTTT GGGCAATGAT AAAAGTCCTT TGCATCAAAG AGAGAAGTTA
TATCTTCTGG CTGTTGGTTA CTATAGAAGT AATGACTATG GAAGGAGCAG GCAGCTTGTG GAGCAATGCT TGCAGGTTTA
TGTTTCTCAC TTGTAGTCAG TAGTCAGAAA CTGATAATCG TACTTTGCCA CTTCTGGATT GCCATTTCGT ATAATGCCTC
ATTTTATGGA TAGTGGAGAG AATTTGTCAT AGTTATTTTT TACAATACCC ATTGTCTATG CTGGGAGTTT TTTTTTTTTT
CTTTTTTATA AAAAACTATA GCTGAATTTC ATTTCATTTA GCTGATATTT ATGGTGTGTT TGGATTTCAG TTGGAACACT
CATACCAACT TTCAGTTTCT ATTGAAACGA CCAACATATG TGACACTTTT TTTTTCAGAT TCTGTTAGCA GCAAAATCCA
TCTCAAACTC TAGTTGAATT AAAAACTTCA ATAAGTTTGT CTTTTCCAAT TTGAGTTGAA TTCAACTAAT GTTATAATTG
AAATTCTGAC ACATTTAATC TACCAATAAC TTTCGTTTTA AAGTTTTCCA TATATAGGTT GGCTCTTTTT TTTTTTCTTG
TTAATGTGTT ATTTGCAAAT CAATGGGTTA TATGTCACAC GCTGCATACA TTTATGTAAA GTTGTCAATT TGGCCAACTT
CACAAGGTTT GGCCTTGACC CACATGGGTC GGAACCAAAA AATTTCCATA GGGCCAAAAA GCCCACATAA GATAAAGCAT
ATAGGGCCAA AAGGCCCACA CAAGATAAAG CATATAGGGC CAAAATTGTA ACAAAAGCTC CTTGGGATAG GGCCAGGGCC
AACCCATGGG CTGTTTGTGC AAGATGGCCT TAGGTTAAGA TAGACAAATT AGGACCAAGT CAAGTAGTCA TTCAGGTTTG
GTCCAAGTCA AGTTGTGTCT ACCTGAACTC AAGGTTGATA GAGTTCGAGC TGAGTTAGAT ACACTTCATT CTAAGTTTCA
TCTAAAGCTC AAGCTAGCAC CAAATGAACG ACTAGCTGAG TTAAGCCAGG TCGATGGTTG AGCAAAGTTG GTTGAGGTTG
AAGGTTGAGA TTGAATCAGA AATCAAGTAA AGTTGGCTTT GGCTTAAGAT CAACTTTCAA CCTGGTATGT GCAGCCAGGC
CAAAGGTTGA TCCAAGCCTA TTAGGCCAAT GGTTGAGGCC AATCAATCGG GGTGAAGGTC GTGTTGAGTT GGCTCGAATC
GAAGGTCAAG GTGAATCGAT CTGGGCTAGC GGGGCAATGA TCATGTCGAG CTAGTTAGAG ATAAAGGTCG AGGTAAGTTG
GTTCGGACGA AAGGTCAATT GAAGTTAGCC CATGTTGATA AATTAAGTCG AGTCAGCCGC ATCAAAAGTT AAGCCTAGTT
GGTCATGTTA AATAATTGAG TTGAGTTAGC CGAATTGATG TTCAAGCCTA GTCATCTAGG GTCAAGTGGC CAAGGTTGAA
GGTTGATCTA AACTTCTCAG GGCTGAAGGT TGAGGCTAGT TAGCCTGGGC TTAAAGTCAA GCTAAGTGGG CTTGGGTTGA
AGGTTGAGGT GAATTGACCA GGGTTGTCCG ACCTAGGGTA ATGGTCAAGG CGAGCAGATT CGGGTCAAAG GTCAAGGGGG
TCAACCCGAG TAGAAGTTCG AGGTGAATCG ACCTTAGCTG AAGGTCGACT TGCCTAAGTG AATTTTGACA AAAGTTGACT
AGTTCCAACT GTTGACCTGA GTTGGCTTGG GCTGAAGGTT GACCTGAGTC AGCCTGGTCG AAGGTCGACC AAATTTAGCC
TAGACCAAAA GTTGCCCAAG TGGGCTTGAG CAAAGAATCA AGTCAAGTGA CCCAAAGTGT AAGTTGATCC TTGTCGTTTA
AGGCTAAAGG TTAAAGCGAG TCAGCCTAGG TCGAAGGTTG ACTGAATTGG CTCATAGAGA AGGGTAGAGT TGACTCATGT
CAGGTTGAAG GCTTGACCTT TCGGCTTGGG CCGACTTGAC TCTATCTTCA GTCTGAGCAA ACTCAATTTG ACCTTTGGCA
CGAATTGACT CAACTCTACC TTCAACCCGA GTTGAAGGTC TTGTATTAAG GAGTTAATTA AATTCTTGTT GCACAGCCAA
AACCCACTCT AAGAGGAGAC TTTGGGTGCT AAGACCTCTT TAGGCTCCAT ATTTGGTGGA CCAATAAAAT GGGGGGCTCG
TTTAGGGGTA GGTTGGGTCT AGACGATAGA CTATAGGTCA AATAGATACC TTTATTATAT ATTATTTCAG TATTCATCAT
TAGATTAAAT TTTGATCCAC TGTACATTAT ACTTTTGGTA AAAAATCGTA GTCTTTAAAA CGATGTGGTA GTACTTTATT
GAATATTGAA AGCTGGGAAA GTCTTTATAT TTACAATAGG TAAAATTTAA GCTCCATCTA AAGTCTGATC CCCCTAAGGC
ATATTTGGGA TTGATGGGTT TTTCGAAAGA ATCACAGAGG AGATGTGAGT CCAGTTTATC TAAGGGATTG ACACTAATCC
AATAAAATAC CTTAAAACAA TGAGTTTATG AATTTTCATT TTTATATGGT GATTAACTTT CTTATATTTC TACTCAATGT
GACATTTTGA CTCACTTGGG TTTCCGAACA AACTTGGACT TCCCAACAAG GATGCTATAC ATATATCAAG GATGATTCTC
TTTCAGCTTT TCTTCTTTAA TACCTCTTAA TTTCATGGGG CACTCTTGTT CTTGCAGATT GCACCTGATT GGAGGCAGGC
ACTAGCCCTC AAGAAAATAG TTGAAGATCG AATTGCTAAA GGTAATGACT GACTTGTTTC TTTAGTTTTT ACCCCGTCAT
TTTATCATTA ACTAAGGAAT TGCAAATGTT TGTTGTATCG ATGCAGATGG TGTAATAGGA ATTGGCATCA CTGCAACTGC
TCTGGGACTT ATAGTTGGTG GCATTGCTAC CGCATTGGCC CGGAGGAATT GAAAATTTTG AGGAAATAAT CTCAACCGAA
AATGATGTTT TTTTATTTAT TTACTTTTCT TCTGGAAACA TGTTAAAAGT CAATGGGAAA CAATCCTCCG TTGAGAAGTA
CTGCTTCTAC TTTTTTGTTT GTCAAAGGGA CTCTGTTCAA ATTCTTGGGT ACCTAATTCC AAATTACTCT GTTCAAATGA
ATTCTTTTTC TACAACTGGG AGGATTACAC ATGCCGTACA TGGTAATAAC TTTAAGCCAC TGGAGCTCTA ATCATATATT
AGTAGATTTA CATCTTGTTT GGATTAAATG ATGGAAAATG ATGGAGTCCA AAAATAAGAG AAAGAGGTGA GAAATAAATG
AAAACGAATG TTGATTTGGA TCAACAAATG AAAAGAAATG ACAAAAAATA TTTTTATTAT AATGTTA

>Vigan.04G264700.01
AAATTTGAAA TCAGACAAGC GTATTTGAAC ATTATTCAAT GTGTAAACGC AATATATAAT AAAAATATAT TTGTCATTTT
GTAAGGTTTG TTTGTACTAA AAAGATAGTT CGAAATTCCA AAAATCCCAA ACCTATAAAT ACCATTGGGT ATTCAGTTAC
CGTTTCTGTG GTGTGGACGC CAAAATGGGA AGCCTACTCG AGTCCATCGG AAATTTCTTC ACCGGCGGCG AACAGATCCC
GTGGTGCGAC CGTGACGTCA TTGCTGGCTG TGAGAGAGAA GTTGCAGAGG CTGCTCGTGG TGACTCTGAG GAGCGGAAGA
ATGAGAGTAT AATGAGGTTG TCGTGGGCTC TTGTTCATTC AAGGCAAAAG GAAGATGTTC AGCGCGGAAT AGCCATGCTT
GAAACTTCTT TGGGCAATGA TAAAAGTCCT TTGCATCAAA GAGAGAAGTT ATATCTTCTG GCTGTTGGTT ACTATAGAAG
TAATGACTAT GGAAGGAGCA GGCAGCTTGT GGAGCAATGC TTGCAGATTG CACCTGATTG GAGGCAGGCA CTAGCCCTCA
AGAAAATAGT TGAAGATCGA ATTGCTAAAG ATGGTGTAAT AGGAATTGGC ATCACTGCAA CTGCTCTGGG ACTTATAGTT
GGTGGCATTG CTACCGCATT GGCCCGGAGG AATTGAAAAT TTTGAGGAAA TAATCTCAAC CGAAAATGAT GTTTTTTTAT
TTATTTACTT TTCTTCTGGA AACATGTTAA AAGTCAATGG GAAACAATCC TCCGTTGAGA AGTACTGCTT CTACTTTTTT
GTTTGTCAAA GGGACTCTGT TCAAATTCTT GGGTACCTAA TTCCAAATTA CTCTGTTCAA ATGAATTCTT TTTCTACAAC
TGGGAGGATT ACACATGCCG TACATGGTAA TAACTTTAAG CCACTGGAGC TCTAATCATA TATTAGTAGA TTTACATCTT
GTTTGGATTA AATGATGGAA AATGATGGAG TCCAAAAATA AGAGAAAGAG GTGAGAAATA AATGAAAACG AATGTTGATT
TGGATCAACA AATGAAAAGA AATGACAAAA AATATTTTTA TTATAATGTT A

>Vigan.04G264700.01
ATGGGAAGCC TACTCGAGTC CATCGGAAAT TTCTTCACCG GCGGCGAACA GATCCCGTGG TGCGACCGTG ACGTCATTGC
TGGCTGTGAG AGAGAAGTTG CAGAGGCTGC TCGTGGTGAC TCTGAGGAGC GGAAGAATGA GAGTATAATG AGGTTGTCGT
GGGCTCTTGT TCATTCAAGG CAAAAGGAAG ATGTTCAGCG CGGAATAGCC ATGCTTGAAA CTTCTTTGGG CAATGATAAA
AGTCCTTTGC ATCAAAGAGA GAAGTTATAT CTTCTGGCTG TTGGTTACTA TAGAAGTAAT GACTATGGAA GGAGCAGGCA
GCTTGTGGAG CAATGCTTGC AGATTGCACC TGATTGGAGG CAGGCACTAG CCCTCAAGAA AATAGTTGAA GATCGAATTG
CTAAAGATGG TGTAATAGGA ATTGGCATCA CTGCAACTGC TCTGGGACTT ATAGTTGGTG GCATTGCTAC CGCATTGGCC
CGGAGGAATT GA

>Vigan.04G264700.01
MGSLLESIGN FFTGGEQIPW CDRDVIAGCE REVAEAARGD SEERKNESIM RLSWALVHSR QKEDVQRGIA MLETSLGNDK
SPLHQREKLY LLAVGYYRSN DYGRSRQLVE QCLQIAPDWR QALALKKIVE DRIAKDGVIG IGITATALGL IVGGIATALA
RRN*