GBrowse Details

Vigan.04G164100.01

Basic Information:
Name: Vigan.04G164100.01
Multiple alignment
Variant Information
Position: Chr04:23099012..23106983 (+ strand)
Length: 7972
Functional Information:
Description: Similar to Uncharacterized protein. [K7MSR4, Glycine max]
GO: Biological Process: intracellular protein transport (GO:0006886)
Cellular Component: endoplasmic reticulum (GO:0005783)
Cellular Component: integral to membrane (GO:0016021)
InterPro: B-cell receptor-associated 31-like (IPR008417)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.22,1.58,1.90,1.01,3.27,4.77,3.41,2.54
Arabidopsis thaliana homolog: AT5G48660.1
Automatic updates:
Name: BT091678 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-20A9 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:23099012..23099526 (+ strand)
Length: 515
Type: five_prime_UTR
Position: Chr04:23099527..23099812 (+ strand)
Length: 286
Type: CDS
Position: Chr04:23106298..23106668 (+ strand)
Length: 371
Type: CDS
Position: Chr04:23106669..23106983 (+ strand)
Length: 315
Type: three_prime_UTR

>Vigan.04G164100.01 class=Sequence position=Chr04:23099012..23106983 (+ strand)
CACGAGGCGC GGTGCTGTTC AAATGCTTGA CTCAATTCTG CTTTTTTATT TTTTTTGTTC CTTAACTCCT TTCTCAATGT
ACCAAACCCA TTGTTGAACC TTCGCATACT CAGATCAAAC TCTCTACACG AACAAGTCTC TCTCTAAAGG GGTTTAAAGA
CATCTCCTTT GCAAAGAATT TTGAGCCTGT TCCCTCGAAA CTATTGCATG TAAAGACTCA AGCTTTGATG CTGGATATTC
GTATTTCGTT TGTACATTCA TGTGGGTCAT TGTGTGGATG CCTCAGTTTC AGCAAAGGGA TAAAAGGGTC TGTGTGAGTG
TGACTTGAGG AGGGTCTTTC CTTCAATTCA GTTCAAGGGT AGCCTTGTGT TCTTTTCATA TTGGAGCATG AGTTTGTTTG
TGGGGTGGAT TTTAATTTTC AAACCGTAAG CGATATCACC TTTTTTTGGA AAAAAGTAAG GATTTTGCAA TTGTAGTGAA
GTGGGAAGCA TTTGTTTTAG TTGAGGGAGC AAAGGATGAT TCAGCTTTTG TTCTTAGTAA TTTTTGCTGA GGTGGTTCTG
GCATTTCTTT TGTTGGTGAA GATAGGACCC TTGAGAGATC TTGTTATAAA GAGCCTGGAT CAATTGAAGA TGGGTAAGGG
TCCAGCTACA GTAAAAACTA TTGCAGGTAC CATGTCTGTG ATTCTCCTTT CAAGTCTCAT GAGCATTGTA AAGGTCCAGA
ACAAAGGTGC TAAACTTGGA ACGATGTCGC CCATGGATCA AGTTCTGTGG AGAACTCACT TGCTGGAGGC TTCCCTCATG
GGTGCGTTCG TGTTCCTTTC ATCTGGATTA TTTGCATCCT TGTTGACTGG TTTAGTGCTA ATTGTACCCT TCATGATTTT
TCATAGTCAT AAGGCTCCAA GAATTGATGT GCATTTTTTT GTTTCAAACT TCTTTAGTAG GCATCAGTTG AAGAAAAGTC
TTATTTGTAT GAAATCTTTA AAATTGGTCA GTGTTTGATG CATTGTTCTG CTTACCATTT TTGTCTGTTC TAAACTAAAA
GAACGTGCTT ATATATAGTA GAAGAACTGT CCTTCTGCAC ATGGTTTTGA GGTTGGTGGT ATCTTCTCTA AACAATGTGT
CAGGTTCACG AATAAATGAT CGAATTTATT AATATCTCTA TATAAATGTT TGATTGAAGC CCATGAAAAT TATATGTTTG
TTGCTCTGTT ATTGAACTTG TTCTAGAATA TATATATCCA TAATCTCTTC AATTTTAAAA GCAACTGAGA AGTAATAATG
TTCGTTATTA AGTTGCTATT ACAAAATTGA CACCTAAACA GATCCTTTTG TCTCACTACC CAACTTTGTT CTGATTCTCG
ATCTTTCTGA ATTTAACTGT CGTATTGGAC CTAAATGATT TACTTAGAGT TTTGGTTACA GGAGTATGGA ATTGCAATAA
GAAAATATAA ATTCAGTTTT GTGGGGCGCG GGGTGGTTGC GGGGGTTAGA AGAGGATTGT CTTGGGAATT TGAATTCCCA
TTGTAAGTGA ATAGTGTTCT TCATTATTCA ATGAAGATTA CACTTTTCAT TTCCTAAACT CTGTGTATTA TGCATGGATA
GCAGTAATAG TTCATATTCT TTAGTCTGCC TTCTTTTGTG ATTGATTTCT AGACGATTCT GATTAATATA TCCTTTTAAC
AAACATCATA GTTATAACTT ATATGTTTGT ATAAGCATGA ATCCTGAGTT TTAGACATTT TCTTTAACTC CTTTGTTGTT
GATCTTTCAC CCATGGTAAC TTTGTGATGC AGAGGAATAC TGAATATTAA TATCACAAAC TTATTAATAT TCTTCTAATA
TAACATTAGT ATATGAGAGC TTACTCTTAA TAGCAATGAC ATTAGGGGTG GGTTGATCTT CTGTAAATGG TAGTTCCTCA
ACACAAAGGG TATGTTTCGA CAAACTTCTC CATAAACACT TGTAGGAGAA AAGAAAATGA AATTAGTTTA AAATTAGTTT
GTGCATAAAC TAATTGTAGA AGGGCTCTCA TACTACTTTT CCAATTTCTT ATTTTAACTT GTGCACGAAC TAATTTTAGC
GTATGAAAAA GTTTATTTCA TTTTTTTCTT ATTTTTCTCT CCTAGAAGTG TTTGTGGAGA AGTTACTTCA ACCATGCTCA
AAATCAATAT GGGACATACA CTACCCCATC AATCTTGTTG ACTTGATCAA AAAAGAGTAT TGTGAAATCC ACCCTTGATC
TTCACTGTGG GACTTGGGCA CCTCACAATC CCAAGTTCCT ATCATAACAC CACCCCTAAT ACATGGGCAA CCAGCTCAGA
TAACAATTAA TAAATACCCA AGAAATAGTG GAAACTACCC TCTAAAGCTA GCTATTAGGG GGGAGGGGAG GGGGAGAGCC
AAATATTTAG ATACTCCACC AAGCATCAAA TACAGATGGG CACACCATAA TACCAAGTTC CTATAAGTTG AGAGAACAAG
TAATGAAATG GAAATAAAGC TATTTGATGT AGTTACAAGT AGTTTGTAGT TAGTGATGAG TCTTTTTGAG AGAGAATCAC
CACAAAGACA CAACATCAAT GAGACATGAA CCTAACTTAT ATAAGGGATT GACACTATGT TAGGTTCCTG GGTTTGGAAC
CTAACAACAC ACCCTCTCGA TGCCGATAAA AGAGATGAAA CCCAAACAAT AACACCCACT GACAACAGAT AATAGAGATG
AAAGAATGGA TTCTCTTATT CACAATAGTA GAATTGTCAC TTTACAGAGA ATGGGGTTGG GAGCATAACC TCCCTGGTTG
AGAGCATAAC CTCTCTCTAC ATGCTAAACC TAACTTTACA AAATAATACC CGATAATCCT CTACAGAGTT ACAAGAGCTC
TATTTATATC AGCTCTGACC CGCTACCCCT TTTACAACCG ACACCCCCAC ACCCTTAACT CCTAAACCCA CCTATTCTAT
CATCCTATAT CCTAACATTA CACCCCCCTG CAGAACAACC TTGTCCTCAA GGTTGAAACC GAAAAACTTG GTCTCTTGGC
TCCTCTTCAT CATCTTGTTA TCATTTGAAG AGAATCCACT GGCTACTGCC CACCAATTCA GGTCGAGAGG CTTAGGTGGT
GGCAATTCCT CCTCCACTAT CTTCCATTCT TCCTCTTTCC TTCCTATCAC CCCCAAACCC AATACCAAGG TCCACGATTC
TACTTCCTTT ATTTTTAACA AAGCTTTTGG CTCCCCCCAC CTTCTAGCTA GTGTTGGATC CCCCTTGTTG AATACCTTCT
TCCCTCCTTG ATTGAACACC CTAGTCAATA CCATTTGATT TCATCCTATA CTGGGCAACA CCGTTCGGTT TCGTCCTTTA
AAGGGCAACA CCGTTCGGTT TCCTATCGAA CCGTGCAGCT TCATCCTTTT GGCTGAATAG GGCCTCCAGC CGAGAGAGTG
GACAACTCTG TTTGCTTCAG GTCTAATTTA GTCTCGGATC GCTCGACAAC CTCACCTGGG ATATTGCGCT TCAGGTCTAA
TTCAATCGTT CGGTCCGTGT TGGTTTTCTT CCTCTGCTCA TCCCCCAAGC TCACCTGGTA TGGTTGGGTA TCCTCCATGG
GTAAACCCCG TTCCTCGACC AGTCCCTTGC CTATGAAATT GTGGCGGGCT CCACTGTCGG TCAAAACCAT ACTCGTTGGG
CCCCCTATCA AACCGTTCGG CTTCATCATT TTTGGCTGAG TGAGGCCTCC AACCGAGAAA ACGGACATCT CCATCTGCTT
CCGGTCTACT TCGGTCTCAG CTTCCTCAAT CTCCACCTCT TCATCCTCCC CCAAAATAAC CGTCCCTCGA CTCTTTTCTG
GCCACTGATG GCCTGGACCG AACGGTCGTC CTGGATTATG GTGATCGGCC TCTGACTGCT CGGTAACTTT CAATTGGCAT
GGGTTATAGC AATAGGTCTC AGACAATGTC ACTTCTTCGC TCGGTCGTCC CCAAGACGAT TGGTCTTCAA TCCCGCTCCC
GTTCCCGACC TTCTTGCCTC CCTGGAATTC TTCAACATCC TTTGTAATCC ACATTGCCAC CGTCCCTGTT TGTTTCGATG
CCGCCAAACG CTCAACATAG GTTCCAAACC TTGTCACCAG GGCTTCCTTC AACCCATCCC ATGAACGATT CTTGGCTTTC
TCCTTCCAGG CTCTAAACCA GTAGCCCGCG CTACCCTCCA TGCTTATGTC TGCGAACCGC ACTTTCTCCT CCTCTGCTAC
TCCTTGAAGC TCGAAAACCC TCTTCGCCCT ATTGATCCAG TTTAACGGGT CCAACCCTTC GAAAGTGGGC AATTCTACCC
TTTTCTTCCC GCTGGGTTGC ACTTCATGGC GTTCATCCCC TCTCTCCCCT TCCTCTTCCT CTCGTCGGTC CCAATGTTGG
CCGTCCCGGT TGTGGCCTCG ACCACCCAAC CTCCTTATGA TTTCTTGCAA ATCTTGACGT ATTGCAGCAT AATCTTGGCT
TATTGCAGCA TAATCTTGGC ATATTGCTGC ATAATCTGCT CGTAGCTCCC CTGTTTGCGC CTTCATTCTA TCAACCGCAA
TTTCCTTCAC CCTCACACGA TTCCAGCGGC GTCTCGATCC GGCAGTCCCC TCCCAAGCGG ATCTGACAGT CGTCGTTCCC
GTTTCTCCTT GCTAGCTCTT CTTCCCTTCG AAACAGATCC GGCAAGTCGG ACCAATTTGT TAGGTTCCTG GGTTTGGAAC
CTAACAACAC ACCCTCTTGA TGCTGATAAA AGAGATGAAA CCCAAACAAT AACACCCATT GACAACAGAT AATAGAGATG
AAAGAATGGA TTCTCTTATT CACAATAGTA GAATTGTCAC TTTACAGAGA ATGGGGTTGG GAGCATAACC TCCCTGGTTG
AGAGCATAAC CTCTCTCTAC AGGCTAAACC TGACTTTACA AAATAATACC CGATAATCCT CTACAGAGTT ACAAGAGCTC
TATTTATATC AGCTCTGACC CGTTACCCCT TTTACAATCG ACACCCCCCA CACCCTTAAC TCCTAAACCC ACCTATTCTA
TCATCCTATA TCCTAACACA CTATCTCCAA CCCAAAATAT TAAGAGAATG GGTTTATGAT TCTTCCTTTT ATGGTGTTTA
ACTTTTTCAT TTTTATTTAA TGTGAGACTT AGACTCATAC TTAGATTCCC AATCATTAGT AACCATGTCA ACACATATAG
TTATGAATAG GAGAGATTTG TATAAAAATA GATTGGGCAC AAAGAAGTAG GGGCTTGTGA AAATATATGT GGTCTCTTGG
AGAACCATAG TTATTCATTT TCTAATATCT TACATTTTGA ACATATGCAT GGTTCACATT GGGAATGACA AATAGAAAAA
TAATATTTTT AAACAGAAAA ACACATTCAC AAATAACAGC ATCAAATGAT TTTTCTAAAA AAAAGCTTTA AACCTTATGT
ACAATATTTT TGGCAAAAAT TGCAAATTGT ACAATTTTTC TGACAAATTG TAAACCTCTT CATGTAACTT TTTTACAAAA
ATTAAAAACC TTCTCTTGCA ACTTTTCTAA CAAAGATTAC AAACCTTCTC ATGATACAAT TATCCAAGCC TCATTTACAC
TCAAGAAAAG TTGTAGTGAC AATACTCAAA TAAACCCTTT TTCTAATTTT TTTCTTCTTC GAATTACTTA ATGTGGGAGT
TTGATTAATG CTCACTTGAG AACCAACAAT TCAGTCTTTC TTCCTTTTGT AAACCTCATC TTTCCTTAGT TTTTTTATCT
AATTTATAAA AACACTGAAG CCAACATCTA CTTCCACAAT CTAGAGTAGG AGACTCCACA GGGTAAGAGA ATGATACTTT
CATGTGGACC TACTTTATCA GCTTCTTCAA ACCAATAAGG ACTTGATGTT GATGATAATG AGGGAGAGGC TTCAAGATGG
CTACTAACTT TTAACTGGGA CGGGCCAATT TCCAATAAAA TGACGACTCT GGATGCCAGG TCTGGTGCTT TCAATTCTGA
ACTGGTTTGT TCATCTCCAT ATGCACAAAA GGTAGTCATT CAAAAATTCA GAATAAAAAA AATGGAAATG AATAAAGCAA
GATTTAGAAG GATTCCTATC TTTATCTATC CACGGAAATA CCTATTTATA CGGAAAGAAA TCTATTTGAG AATCAATCAA
GAATATCGTC CATCTGGATA TGCAATATCC CTAAGAGTGA TTATTGCAGA TACAATGGTA TTGTTAAAAG ATGTTGGGAA
AAAAACACAT CATCAATGAA GAACATTACT GTCTTTATCC CTGAAAATCA CCCTACTAAC ATAAAAATAA GAGCAACAAT
CCCTGAAAAC CACCCTACTA ACGTAAAAAT AAGAGCAACA CAAGGAACAC GGAAGAAAAA CCATGACTAT TGTCTAATGA
CAACCATATA ATACCACTAT GTAAAAATTT GTACAACACT CTCAAACCCT TTGACCGTAA GTACACCCAC ACACTCCAGA
ACAAGAATTT AACTACACTT CATAAGACTT TACTACAAGA GTATAAGAAA AAGCTTTGGG TAAGAAACAC TATGAACTTA
AACCATTATA TAACTACTAT TACTCACTCC CTTACTTACC CTAAGTGATG TGTGATTTTC CAAGATGTAT TATTTTCATA
AGTCCAACAA TCTCTCCCTT GATTAAAATA AACACATCTT CATTGTCTAT ACTAGCAATC ATACTCCACC TTAGAAAGTA
TACTCACTAG GAATTAAACA ATCCCAAGAA TTTCCATACA CCCTGCATCA AAGCTAATCA ATGTTGATGT ATAATCACAA
TACACCTTAC ATCAATATTA GTCAATGTCC ATATAAAATT ATCCTACACC CTGCATTAAC TGTTGAATAT ACTGAAAATT
ATGTATGGGA TTAATATCCC TTGTGTTGAA TATACACATA GGGTCTTACT TAATTATTTT TTGGTAGAGA TGTGTTGTTG
TATGTGTTTT ATTTAGCAAG TTTAGTCCAA GTGCACAAGA AGATCGATGC CTATCCAATC TTCTCTTTTC TTCTAGACCT
TCTTTGTTTT GAATTCTGTG AGGACACTGG TCATCAATTT TCTTGTCTGT TTTAGGATCA GTTTAGTTTA AGGACATGTT
TTTGGTTTCA TTAATAGTTA AACAAACTCA ACAGGAAATA AAGTGACATT TTTTGCTGTT ATTATTTGTA AAAGCAGAAA
ATGGGACTGA AACATTGACA CAAACATTAG CATACATCTT AAACTAGATT TTACCTTGTC TTAAATGAAT TATTTTGGTC
TTGCAGGTTT TACATTATTC CTTGGATTTC TTATTGATCG AATCCACCAT TATCTTCAAA AACTTGTTAA TTTAAGGAGT
AATGCAAGAA CTTCAAACCA AGAATTAGAA AACCTTAAAA AGGAAACTGT GCAACTTAAA GAAAAGGATG AGAAAGCTTC
GAAGGAGATG CAACAGCTTA AGGAAGAACT TTCACAGGTG GCCGAAAGTT TGAAAAAGAT AAAATTGGAA TCTGAAGAGA
AGGACAAGAA AGTTGAGACT GCTGAAGCAC ATGTTGCTTC CCTCCAAAAG CAAGCTGCAG ATCTACTACT TGAATACGAC
AGACTCTTAG AAGAAAACCA AAATCTGCAG GCTCAAACAC TGGGACACAA GAGTTGAGGA ATGGTTGAGA TGCATTGATA
AACAAATTTT GGGGATGAGA TTTCTTCAGG GCCATCCTTG GTTAGGTTGC AAAATCTTTA TTTTGGAAAA AAAAAATCTT
TTGTTCCTTT TTGAAAATGC AGCATTGACC AAAGGAGCTC TGTGCTAAGT TTATAAGTTT TGCAGTTCTT TTTAGTTTGT
TCTCGATTTA GTTATCAGAT TATTGCGTAA CAAATTCACC ATCTTGGTTT TTTGTTGTCT TTACCTCTTT TATTGTTTGG
ATGCATGCTG AAGTATTTTT GGTGGCACAA ATAGTCATCA AGAATTACAA AG

>Vigan.04G164100.01
CACGAGGCGC GGTGCTGTTC AAATGCTTGA CTCAATTCTG CTTTTTTATT TTTTTTGTTC CTTAACTCCT TTCTCAATGT
ACCAAACCCA TTGTTGAACC TTCGCATACT CAGATCAAAC TCTCTACACG AACAAGTCTC TCTCTAAAGG GGTTTAAAGA
CATCTCCTTT GCAAAGAATT TTGAGCCTGT TCCCTCGAAA CTATTGCATG TAAAGACTCA AGCTTTGATG CTGGATATTC
GTATTTCGTT TGTACATTCA TGTGGGTCAT TGTGTGGATG CCTCAGTTTC AGCAAAGGGA TAAAAGGGTC TGTGTGAGTG
TGACTTGAGG AGGGTCTTTC CTTCAATTCA GTTCAAGGGT AGCCTTGTGT TCTTTTCATA TTGGAGCATG AGTTTGTTTG
TGGGGTGGAT TTTAATTTTC AAACCGTAAG CGATATCACC TTTTTTTGGA AAAAAGTAAG GATTTTGCAA TTGTAGTGAA
GTGGGAAGCA TTTGTTTTAG TTGAGGGAGC AAAGGATGAT TCAGCTTTTG TTCTTAGTAA TTTTTGCTGA GGTGGTTCTG
GCATTTCTTT TGTTGGTGAA GATAGGACCC TTGAGAGATC TTGTTATAAA GAGCCTGGAT CAATTGAAGA TGGGTAAGGG
TCCAGCTACA GTAAAAACTA TTGCAGGTAC CATGTCTGTG ATTCTCCTTT CAAGTCTCAT GAGCATTGTA AAGGTCCAGA
ACAAAGGTGC TAAACTTGGA ACGATGTCGC CCATGGATCA AGTTCTGTGG AGAACTCACT TGCTGGAGGC TTCCCTCATG
GGTTTTACAT TATTCCTTGG ATTTCTTATT GATCGAATCC ACCATTATCT TCAAAAACTT GTTAATTTAA GGAGTAATGC
AAGAACTTCA AACCAAGAAT TAGAAAACCT TAAAAAGGAA ACTGTGCAAC TTAAAGAAAA GGATGAGAAA GCTTCGAAGG
AGATGCAACA GCTTAAGGAA GAACTTTCAC AGGTGGCCGA AAGTTTGAAA AAGATAAAAT TGGAATCTGA AGAGAAGGAC
AAGAAAGTTG AGACTGCTGA AGCACATGTT GCTTCCCTCC AAAAGCAAGC TGCAGATCTA CTACTTGAAT ACGACAGACT
CTTAGAAGAA AACCAAAATC TGCAGGCTCA AACACTGGGA CACAAGAGTT GAGGAATGGT TGAGATGCAT TGATAAACAA
ATTTTGGGGA TGAGATTTCT TCAGGGCCAT CCTTGGTTAG GTTGCAAAAT CTTTATTTTG GAAAAAAAAA ATCTTTTGTT
CCTTTTTGAA AATGCAGCAT TGACCAAAGG AGCTCTGTGC TAAGTTTATA AGTTTTGCAG TTCTTTTTAG TTTGTTCTCG
ATTTAGTTAT CAGATTATTG CGTAACAAAT TCACCATCTT GGTTTTTTGT TGTCTTTACC TCTTTTATTG TTTGGATGCA
TGCTGAAGTA TTTTTGGTGG CACAAATAGT CATCAAGAAT TACAAAG

>Vigan.04G164100.01
ATGATTCAGC TTTTGTTCTT AGTAATTTTT GCTGAGGTGG TTCTGGCATT TCTTTTGTTG GTGAAGATAG GACCCTTGAG
AGATCTTGTT ATAAAGAGCC TGGATCAATT GAAGATGGGT AAGGGTCCAG CTACAGTAAA AACTATTGCA GGTACCATGT
CTGTGATTCT CCTTTCAAGT CTCATGAGCA TTGTAAAGGT CCAGAACAAA GGTGCTAAAC TTGGAACGAT GTCGCCCATG
GATCAAGTTC TGTGGAGAAC TCACTTGCTG GAGGCTTCCC TCATGGGTTT TACATTATTC CTTGGATTTC TTATTGATCG
AATCCACCAT TATCTTCAAA AACTTGTTAA TTTAAGGAGT AATGCAAGAA CTTCAAACCA AGAATTAGAA AACCTTAAAA
AGGAAACTGT GCAACTTAAA GAAAAGGATG AGAAAGCTTC GAAGGAGATG CAACAGCTTA AGGAAGAACT TTCACAGGTG
GCCGAAAGTT TGAAAAAGAT AAAATTGGAA TCTGAAGAGA AGGACAAGAA AGTTGAGACT GCTGAAGCAC ATGTTGCTTC
CCTCCAAAAG CAAGCTGCAG ATCTACTACT TGAATACGAC AGACTCTTAG AAGAAAACCA AAATCTGCAG GCTCAAACAC
TGGGACACAA GAGTTGA

>Vigan.04G164100.01
MIQLLFLVIF AEVVLAFLLL VKIGPLRDLV IKSLDQLKMG KGPATVKTIA GTMSVILLSS LMSIVKVQNK GAKLGTMSPM
DQVLWRTHLL EASLMGFTLF LGFLIDRIHH YLQKLVNLRS NARTSNQELE NLKKETVQLK EKDEKASKEM QQLKEELSQV
AESLKKIKLE SEEKDKKVET AEAHVASLQK QAADLLLEYD RLLEENQNLQ AQTLGHKS*