GBrowse Details

Vigan.04G011900.01

Basic Information:
Name: Vigan.04G011900.01
Multiple alignment
Variant Information
Position: Chr04:985855..989699 (- strand)
Length: 3845
Functional Information:
Description: Similar to uncharacterized LOC101208221. [XP_004166187.1, Cucumis sativus]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:5.76,1.95,5.51,12.20,6.15,9.59,7.76, 4.64
Arabidopsis thaliana homolog: AT5G38060.1
Automatic updates:
Name: NM_001249392 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100526944 (LOC100526944), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:985855..986099 (- strand)
Length: 245
Type: three_prime_UTR
Position: Chr04:986100..986254 (- strand)
Length: 155
Type: CDS
Position: Chr04:989399..989648 (- strand)
Length: 250
Type: CDS
Position: Chr04:989649..989699 (- strand)
Length: 51
Type: five_prime_UTR

>Vigan.04G011900.01 class=Sequence position=Chr04:985855..989699 (- strand)
GACAGTGTTC AGAGAATCGA AACCTTCTTA TCTGTGTTTT GTGATTGGTT CATGGCTCTT TCCTTTTCAC AACACCCTCT
TCTCCAGGGA AACAAAACAC CTTTTACTCT GCAATTTCAA TGCATGACTT CATCAAAGCA CAACAACGCA AACATACTCA
CGTACCCATC TATTCGGTGT TGCTCAAGTT TGAACCAAAA AAGCAGCATC AACCTCAGAA CTTGCAAGAA CTGCAAAACC
CAATTCGACC CTTCTCTCAA TCACCCTCTT GCTTGTCGAT TTCACACTGC CCATTTTGGA GGTACCCACT TCGTTTCTCA
CCTACTTCAT GCTTATTTCC CTCTCTAAGT TTAGGTTTTA CTTATGAAAT TTATGGGCTT GAAAAGAAAG AGAAATATTG
TAGAGAAATG CCCCAAATTA TTGTTCACAA ATGTGTTCCC AAATTTTAGA TATTTATTCT CTGTAGTCTT AATCTAATTA
CAGAGGAGAT GATGAAACTC GTAACATGGA GATAATTCTG TTTCTTATGA GAACTTGACT ATAATTTATC CATCCACTTA
GAAGTTCACT TTTGACATGA AATAACCCCT TTAACAGCTT TGGACGTCTT TAGAAGACCT GGTGAAGGAA TCCTCAATGT
TGCACTGCAA TTATTGAAAC CAATTAGACA AAGATAAACT CCACCTATTA ACTGTGTTAA GCTGGAGGAG TTGCCTGATT
TTAGCCAAGT GATTGTAGCG TTTCAATTCA GTGTCTATAT AAGCTTTTGA AATGTTCTTG ATTGTGTCCA GATCGTTAGA
ATGTTTTATA AATTTTCAGA TTTAAATAAT ACTAAACAGG TGATAAAACC TGACTTTTGC TATTTTTACT TAATAAATTG
TAATGGCTTG TGACGATTAA TGCATGTTAT CTCACAAAAC CTTGAGCTGT CTAGGAATGT CCCCTCTAAT TCATTTCTGC
ATGAATTATG AATGTTTGGG TAAACGTAAA TAAGTATTTG TTCCTCCAAG ACTTATTGTC TCATTCAGAA GCTCATGTTT
GATATGAAAA ATAAGAATTC TTACAATGAT CTCAAATCAT TTAATTAAAC TCCTGGCAAA AAAGCTCACG TTTGATTAAT
TGATGTCAAT TAGGTGAAGA TAAGCTGGTT TATTTGACCA AGTTAATTTC CCATAACATA GTTTTTGTTT TCTCTTTTAA
ATTTTGCTGT CTTCATGGAG GTTTGGCTGA TAAAGTATGG CTAAGATATA AATATTATCT TTAATTCTTT ACTTCGAAAG
TCCCATATGA TGGATTTGTA TGTAGTTATA AAAACCATTA TCAAAGACTT GTTATATCTG ATATGGTATG GTGAAAACCA
AATTCCTTTC ATTTGCTATT TGAGATATTG ATATACTAGA ATCTTGAGAG GTATAGAAGG GCTTCCACTA AGTGCATTGT
AGGACTTAAC AACTATAGCT ATCTTCTAAC CTTTTTTAAA GCTATCACAA TGCTTTTTCT TGTTCACCTT ATCCTTAACT
ACTTTCTTTT CCTTGGGACT TGAAAGCTAT GTCTCTGTAC CAGTAGAAAC GTGGTGGAAA CATCTTTCAT CCTCATATTG
GACTAGGAGT ATCACTGTGA AATTTAAGTT GACTCAACTG AATAGTTAGA AGTTGTGACA TGTAGCATTT GCCTATAAAA
TCCATTCATT ACCTTCATTT CAGGGGGGAA TTTCCTATTT GTTTTAGAAA TGGATTATAA ATCTTAAGAA GTAGACTTTA
AGTCTAACTC AACTCTACAA AACTAGCTTG TAAGATAAAG TTTTTACCTA CTTATATAAC TGGTTTCTCT AGTTGATACG
GGATTTCCAA TATAACCCAT TCACAACTAA GCATGCACAT CTCGAAAGTA AGACTAGATA CTTGTGAGGA TAACAAATGA
CATGATAGAC CCAACAAACA ATTAACTTTG TTAGGATAGA TTTTGAATGA CTCCAATACT TCTTAAGAAG TAGATTGACA
CATAAGTGAA AATGGTGATG GACTCATTTC AATACCGGTG GACTGACATT GTCCAGTTCC TTGACTACAT CTTGTTCCTT
CTCATTAGAG AATGGTTCAT GTATCAATGA CCTCAACACT AAGGATGGTT TTGACATCTG CGTTGTATAT ATATATATAT
ACAACTTGGC AATGCAAAAA ACGGAGAATC TTATCTGTTA AACCATGGAA ATGTTCGAGT ACCCATATTT GAAGGGCATC
GGTGCAGCCC TTAACATGGG TGTCCACACT ATTTTAACTG TCCACAGCTG AATTCAAACC TTTCAAGGAT GGAGAATGTT
TATCCCACCC CTTCACTAAC ACCCCTATTA GGTTATTGCT TGTCTAGTAA GAGTGGCCAT TGGCTAACAA CCAACTGAAT
TGGGGTTGCT TTTATTCTCT GTATTAGTCC CTCTGGTAAC TTATCATGAA ATTCAACTAA ATGTTTCAGA CTTGTTGTAA
GTCTGATCCG TGAACAATTT TTTCAGTTGG CTATATATGA CAATTAGTTG GTGAAAGGCT TGGATTCCAC TGTGGACGAT
TATAAAAGTG TGGACACCTG TCTCAAGGGC CCTTCAAATA AGAGTATTTG AACATTTTTC GTGGTTCAAG AGGGAACCAA
CCGATAAGTT CCTTGTTTTT TACATTGGCA GGTAATATAT ATGAAGAACA TAGAGGTTGA AACCATTCTT AGCATTGAGA
TCCTTGATAC ATTAGAACCA TTCTCTAGTG AGATGGAACA GATGGGTAGT CTAGGAACTT TACAATGTGA GTCCACCTTG
TATTGTTGAC TCTATTACCA TTTTCACTTG GCGTCAAACT CCACGTTTTA AGATGATATC AGAGTTATTC AAAATCTATC
CTAACAAAGT ATGTTGAGTC TATCATACCA TCTGTTATCT CCACGTTTTA AGATGATATT AGAGTTATTC AAAATCTATC
CTAACAAAGT ATGTTGAGTC TATCATACCA TCTGTTAACG GATCATCCAA AAATATCTAG TCATATGTTT CAGATTTACA
AAATATAAGT AATGTAAATC TCACCTTACA AAATTAATTT GTAAGGAGTA AATCTAGTTT GTAATTTGCC CTGATTTAAA
CTAACACATA TAAATTTAAT GCTACAGGGA AGGAAATCTA GAAATCTTAT TATCTTATCT AGATCCTATG CTGTATGGCA
TCATATTAGT ATTTTCTGCT GACAAAGCTC AAAGAACAAT TCATGATGAA GCATTCTTGC CTTGTTGATC TTATGATTTC
ACTCTTAAAA TAGTGTAATC CTAATTGGGG CAAAATGTTA ACCTTGGGAA TTTCGTCTAA CCATTACATT GATGAAAAAT
TGTGGATTCC AAATTTCAAT ATTATGTTAT TAATTTGCAT TACTGTTTGG ATTTAAGTTG GCTTTGATTC ACATCTCTAC
CACAGGAGAA ACTAAGAGAA AGTTTGAGAG TGTGTATGAA GGGGGCACCA TGAATACTCC TGACTCTGGC AAAGTTTTGC
AGTATTGGCA TTGCTGTGGT TCTGAAGATC CATTTGATCC TGGTTGCACA TCTTCTCCTC ATGCCTCATA TGATGATTGA
TGCACATGTC ATTCATCATC ATCCATGAAT CAAATTCACT TCTTCCATTT ATTTTTCTTG TAACTATATA TGGTTTCTAA
ACTCATGTGT AATATTTTAG ATTCCTTGAA TAATTTTAGA AAATTTAAAT GTTGCCCAGA TGCAAAACAA AGTGTGGACT
ACACATCTAA TCTGGTACCC AAGGTGTATA ATTTATGGAT AAAGTTGAGC ATGGGAAGAG TTTTTGTAAA AATTAACTTA
ACAAA

>Vigan.04G011900.01
GACAGTGTTC AGAGAATCGA AACCTTCTTA TCTGTGTTTT GTGATTGGTT CATGGCTCTT TCCTTTTCAC AACACCCTCT
TCTCCAGGGA AACAAAACAC CTTTTACTCT GCAATTTCAA TGCATGACTT CATCAAAGCA CAACAACGCA AACATACTCA
CGTACCCATC TATTCGGTGT TGCTCAAGTT TGAACCAAAA AAGCAGCATC AACCTCAGAA CTTGCAAGAA CTGCAAAACC
CAATTCGACC CTTCTCTCAA TCACCCTCTT GCTTGTCGAT TTCACACTGC CCATTTTGGA GGAGAAACTA AGAGAAAGTT
TGAGAGTGTG TATGAAGGGG GCACCATGAA TACTCCTGAC TCTGGCAAAG TTTTGCAGTA TTGGCATTGC TGTGGTTCTG
AAGATCCATT TGATCCTGGT TGCACATCTT CTCCTCATGC CTCATATGAT GATTGATGCA CATGTCATTC ATCATCATCC
ATGAATCAAA TTCACTTCTT CCATTTATTT TTCTTGTAAC TATATATGGT TTCTAAACTC ATGTGTAATA TTTTAGATTC
CTTGAATAAT TTTAGAAAAT TTAAATGTTG CCCAGATGCA AAACAAAGTG TGGACTACAC ATCTAATCTG GTACCCAAGG
TGTATAATTT ATGGATAAAG TTGAGCATGG GAAGAGTTTT TGTAAAAATT AACTTAACAA A

>Vigan.04G011900.01
ATGGCTCTTT CCTTTTCACA ACACCCTCTT CTCCAGGGAA ACAAAACACC TTTTACTCTG CAATTTCAAT GCATGACTTC
ATCAAAGCAC AACAACGCAA ACATACTCAC GTACCCATCT ATTCGGTGTT GCTCAAGTTT GAACCAAAAA AGCAGCATCA
ACCTCAGAAC TTGCAAGAAC TGCAAAACCC AATTCGACCC TTCTCTCAAT CACCCTCTTG CTTGTCGATT TCACACTGCC
CATTTTGGAG GAGAAACTAA GAGAAAGTTT GAGAGTGTGT ATGAAGGGGG CACCATGAAT ACTCCTGACT CTGGCAAAGT
TTTGCAGTAT TGGCATTGCT GTGGTTCTGA AGATCCATTT GATCCTGGTT GCACATCTTC TCCTCATGCC TCATATGATG
ATTGA

>Vigan.04G011900.01
MALSFSQHPL LQGNKTPFTL QFQCMTSSKH NNANILTYPS IRCCSSLNQK SSINLRTCKN CKTQFDPSLN HPLACRFHTA
HFGGETKRKF ESVYEGGTMN TPDSGKVLQY WHCCGSEDPF DPGCTSSPHA SYDD*