GBrowse Details

Vigan.03G247200.01

Basic Information:
Name: Vigan.03G247200.01
Multiple alignment
Variant Information
Position: Chr03:38431035..38435225 (+ strand)
Length: 4191
Functional Information:
Description: Similar to Glutathione peroxidase. [V7CUL5, Phaseolus vulgaris]
GO: Biological Process: response to oxidative stress (GO:0006979)
Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: glutathione peroxidase activity (GO:0004602)
InterPro: Glutathione peroxidase (IPR000889)
Thioredoxin-like fold (IPR012336)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:158.71,35.38,50.76,201.54,20.66,38.2 2,17.65,33.06
Arabidopsis thaliana homolog: AT4G31870.1
Automatic updates:
Name: NM_001249575 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100305775 (LOC100305775), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001249575 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max putative glutathione peroxidase 7, chloroplastic (LOC100305775), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:38431035..38431185 (+ strand)
Length: 151
Type: five_prime_UTR
Position: Chr03:38431186..38431521 (+ strand)
Length: 336
Type: CDS
Position: Chr03:38431752..38431828 (+ strand)
Length: 77
Type: CDS
Position: Chr03:38432009..38432070 (+ strand)
Length: 62
Type: CDS
Position: Chr03:38433512..38433630 (+ strand)
Length: 119
Type: CDS
Position: Chr03:38433710..38433877 (+ strand)
Length: 168
Type: CDS
Position: Chr03:38434350..38434379 (+ strand)
Length: 30
Type: CDS
Position: Chr03:38434380..38435225 (+ strand)
Length: 846
Type: three_prime_UTR

>Vigan.03G247200.01 class=Sequence position=Chr03:38431035..38435225 (+ strand)
AAGAGTTCTA ATTTCTAAAA ATTTTTGTTC AAAATGAGTT TATTTTGATA AAAAGAAAAA AATCATTGTT AATTATCATG
TGTTTCAATT TTACAACATT CTAATATTTT TTCCCCCTGT GTAACTTTCC AACCTACAAT TTCCATTCTG TATGACACAC
AGATTATCTT CCATATTCCA AGTACAGAAA GGACCAAACT TGAGAAGTCT CTTGAGTTTG CAACCACCAA ATATGTCCTC
CATGGCTTTC TCCACCACCT TCTTCACTCC CCTCCATGAT TTCACCCGTG CCAGAACAAA CCCACCACCT TCTCCCTCTT
TTCCTTTCAT CAAATCCTCC TTTGCTTCCT CCAACTCAAC CTTTTTTCAT CCTTCCCTTT CCCTACGAAC CTCATCAACT
TTTCCAAGGC TCTTCATAAA GCCTAGGTCT TTCTCAGTTC ATGCCAGAGC TGCCACAGAA AAGACCATCT ATGATTTTAC
TGTCAAGGTA CCATGTTTAA TTTCAATTTC CACAACCCTT TTTCTTGAAA AGAATTGGGT CGACCTTGGA AATTGAATTT
GGGAAGTGGG GTGTCCATAA TTTTATTTTT ATTATGGATA GTTTTACTGA ATGGCGAATT TCTCAGACTT AGATAAGAGA
GGTTTTATAT TTTTATTATT TTTACTTGTT ATGTGCTCAG GGTATATATT ATATTTGCAC TATATTTTAT GATGCAGGAT
ATTGAGAGAA AGGATGTCGC TCTTAGCAAA TTTAAGGGGA AGGTTCTATT GATTGTCAAT GTTGCTTCAC GATGGTATGG
GCTATTCACT CTTCAAGGAA GATATGTTGG TCAATATGTC TGATGAAGCC TTGGTTTTCC TCATTAGTTC TTACAATTTT
CTATATCTTA AAACCAAATT GGTCATAGCT AACAGTTGTG TCAAACTTTC TTGTCTCTTA TAGTACCGTT TAATAAATTT
CCTTCCTGTG GCAGCGGTTT GACGTCATCG AATTACTCGG AGCTGTCTCG TTTGTACGAA AAGTATAAGG ATCAAGGTAT
GTTTCGTACA GAAGATTGTT ATTTGTTATA TTTCTGAGAA TGGCAATTTG TCATGTTTTA CTTGGTGTTT GCTAATATAT
CTTCTTGGTT ATGAATCTAT CTACTTGTGC AAATCATTCT ATTTTTGTTG GGTGCTGTAT AAAACAAGGA GAGAAGTGTG
TCCCTCCTTT GTGACTTCGG GCACAATTTA TTCGTACCTT TAGATTGGAT ACTGATGTAA ATGAAGTTTA CTGGCTGGGG
TCTGTTTCTC ACATGTTAAC TCTCCTCTAC TACGCAGTTC TATTGATATG GTTGCTTAAA ATTTGATTAT GATTTTACAA
TGTATATTGA CTTCCCTGTC TGCTGACAAA CTATCTTGCT GTTTTTTCCT GTTTAATGGA TTGTTTATGA TACAAAATAC
TGCAGAACCT GTTAACTCGT GTGCTGCAGT TTATTCCACT TTGATTGTTA TTTTGGATTT AATTAAGTAC GTGAACCGGT
TGGAGTCTAA TGAGAAATAG AGTACTATAT AAAGATGAAA GACTCATTAA TCCTTTGTCT TAAGGTTTTG AGTAGAGAGT
GGTGTGAATC CTTTATATGG TTGAGCTCAT ATCTCATTGG TGTTTGTGTT TCCCCATAAC CTCCTCTTCC ATGGATCCAA
CAAAACCATC TATGGGTAAC AAAGAAAAAA AATTGTTTTA ATGAATTATT TATTTGACAG CATGTTTTGA AAATAATCAC
AAATATTATG TAGAATTTTA AGCATTCTTT TTCTCCTTCT TCATATGATG AAGATCAAGG CGAGTTTCTA GCCGTAGAAG
GGTAGAATGT AGAAATACAG ACTCCATCCT TTGTGGCTAA ATTAAGGGTG CACAGTGTGC ATTTAGGGAA GATGGAAATT
TGAAGAGTTA GGTATCGGAT TGAAAGTAAA GAAGTTCTCA TTTTCCCATG TTTTGTTTGG ACAGTGCATT TCATTCTAAG
TTGGGGCGAA AGAATTTACA AAATGATTAG GTAGGGGGTG AAAGTAAAAA AATTTCACTT TCTTTTTGTT TTGTTTGGAC
TGTGTATTGC ATTTCGTTCC AAGTTGATGT GGAAAAAAAT TACAAAATGA CAATGCCTAT TGTAGCTGCT CCATTTTTCG
ATTTGTCATT CTTGTATCTC TGGCTACTAA AGCACACCTT AAGTTTCTTA TTAAAATGAG TAGAGGGACA ATGATGATCT
ATGGTGGACA ATCAGTCAGC GTTGGCCTTG TAATTTCTGG TCTCTTCATT CTTGGAAGAA CTTTGGTGAT TTTGTTTTTG
GAAAATTAAA ATACTTCCAA TGGGTAGATT CAAAAAGTGA TTTTTATTCA ATTTTATATT CTGTTGTTTT TATGAATATG
GTTCTAAGCT TTTCAATTTT AAATTAATAT GATTCTCAGC TACACACATC TAGTGTCCTT ATGCTGCTCC TTTTCAGGTT
TGGAGGTTCT AGCTTTCCCC TGCAATCAAT TTGGTATGCA GGAGCCTGGA TCGAATGAAG AAATTAAGCA GTTTGCTTGC
ACTCGATATA AAGCAGAATT TCCAATTTTT GACAAGGTTT GATACTTTTT CTTCAGCAGC AGTTCAGAAC AGTTTAAAGT
ACAAGTAAAC AAAGTAATTA AGTTCTATAA AACAGGTGGA TGTCAATGGA CCATTTACGG CTCCAGTGTA CAGTTTTCTG
AAATCTAGTG CTGGAGGCTT TCTGGGTGAT CTTATAAAGT GGAATTTTGA GAAATTCTTG GTTGATAAAA GTGGTAAAGT
TATTGAAAGA TACCCACCAA CAACGTCGCC TTTCCAAATT GAGGTATGTT AAGCTTCCAC CTAGAAGGAA ATGTCCAGGT
TCTTATTGTT ACAATAGCAA TGAAGCTTCT ATTCTTTGTT GTTTGAATTG CTCAATTTGA TAAGATTTGG TAAGCCAATG
ATTCGTTTAT TATGTGATGA ATCACATATG GCTTTGAGTT GTGTGATACA TCTTGAATTG GCATGATTCT GTATCACTAA
AAATGCTACA AGGCTTTCAA GAGCAGCAGA AAATGAGTTT TTTTACTTGG TAGCTATAAC TGTTAGTTTT AGTACTATAT
TTTCTTATAG CTTCTTGTAA TTGCTAAAAA ATGGGCTGCA CCGGTTCAAG ATATTAGGAA GTACAGTTAA AAGAAAACTA
TATATTTGTT TTTAAGTGTA TATATAAGAG AAGTTATACG TGTATGTTTG AGAATGGATA CTGAAGCTAT CAAAAAGATT
GTATAATTAA ACCTTTTCCT GATTTACTTT TTCAGAAGGA TATTCAGAGG TTACTTGCTG CATGAGGTTT GCATTTCAGA
ACACAAACAA GAACTGTATG TAGGAGCATA AAGGGAGCGA TCTTGCATAA GGAGTTAATA CTTAAAACAG ATGATGAGCT
ATAAATATAG CCATGTTAAT TACTTTGGTG TCTATACTAA AGAAATTACC AGTTTAGTGA AGAGAAGTTA TACTTCGTTT
GCCCAAAATG GTTCATATTA GTATTTGTTC GTTCTGTTTT TGTGGGAAAA TTCTATGGCC ATTTGTATTA TCCTAATAAT
ATGCTGTCAT TATAAAAGCT TGTAACTTGT GTAACATGGT AGATGCAGCA GTATACTGTT TCTTATTACC GCTATGTTCT
TGAAGTTAGG TTATGTGAGA TCATTTTTTC ACCTTAAAAG AAGGTTAAAT ATAAATTATT TGTCAACTTT ATTTCTTTTT
GTTAAAAAAA TTTATTAAAG AGAGACAGTG GTATGCAGGT GATACATGAT CATCTGGTGT CATGGAAGAG AAAAATGCAA
ATTATTGTTC CCAGGTCAAG TTCAAAGTCA ATTACTAATT TGTTACATGG TTCACATCAC ATGTGAGGTT TTTTGCGGTT
GAAACATTTG GCAGTAGCTT CATGAGAGGA CAAAACATTT AGAAGTTGAT TGTGACTGCG TTAGATAAAA ATTCTCTTCA
TGGCCAAAGA AAGCTTTCTC TATTGCAAAA TTCTATTATA AGTCTTCAAA TATCTTAAAT ATGCAACGAG TTAGAGTTTT
GTAAAATTTG CATGCTCCAA ATAGAATGAA AGTATTCAGG TATTACAGAT GCTGTATTAT TTGCAATCAA TTTTCCCAAT
TTCCTATAAT TCTGGCAGAT TCTCTTCCCT G

>Vigan.03G247200.01
AAGAGTTCTA ATTTCTAAAA ATTTTTGTTC AAAATGAGTT TATTTTGATA AAAAGAAAAA AATCATTGTT AATTATCATG
TGTTTCAATT TTACAACATT CTAATATTTT TTCCCCCTGT GTAACTTTCC AACCTACAAT TTCCATTCTG TATGACACAC
AGATTATCTT CCATATTCCA AGTACAGAAA GGACCAAACT TGAGAAGTCT CTTGAGTTTG CAACCACCAA ATATGTCCTC
CATGGCTTTC TCCACCACCT TCTTCACTCC CCTCCATGAT TTCACCCGTG CCAGAACAAA CCCACCACCT TCTCCCTCTT
TTCCTTTCAT CAAATCCTCC TTTGCTTCCT CCAACTCAAC CTTTTTTCAT CCTTCCCTTT CCCTACGAAC CTCATCAACT
TTTCCAAGGC TCTTCATAAA GCCTAGGTCT TTCTCAGTTC ATGCCAGAGC TGCCACAGAA AAGACCATCT ATGATTTTAC
TGTCAAGGAT ATTGAGAGAA AGGATGTCGC TCTTAGCAAA TTTAAGGGGA AGGTTCTATT GATTGTCAAT GTTGCTTCAC
GATGCGGTTT GACGTCATCG AATTACTCGG AGCTGTCTCG TTTGTACGAA AAGTATAAGG ATCAAGGTTT GGAGGTTCTA
GCTTTCCCCT GCAATCAATT TGGTATGCAG GAGCCTGGAT CGAATGAAGA AATTAAGCAG TTTGCTTGCA CTCGATATAA
AGCAGAATTT CCAATTTTTG ACAAGGTGGA TGTCAATGGA CCATTTACGG CTCCAGTGTA CAGTTTTCTG AAATCTAGTG
CTGGAGGCTT TCTGGGTGAT CTTATAAAGT GGAATTTTGA GAAATTCTTG GTTGATAAAA GTGGTAAAGT TATTGAAAGA
TACCCACCAA CAACGTCGCC TTTCCAAATT GAGAAGGATA TTCAGAGGTT ACTTGCTGCA TGAGGTTTGC ATTTCAGAAC
ACAAACAAGA ACTGTATGTA GGAGCATAAA GGGAGCGATC TTGCATAAGG AGTTAATACT TAAAACAGAT GATGAGCTAT
AAATATAGCC ATGTTAATTA CTTTGGTGTC TATACTAAAG AAATTACCAG TTTAGTGAAG AGAAGTTATA CTTCGTTTGC
CCAAAATGGT TCATATTAGT ATTTGTTCGT TCTGTTTTTG TGGGAAAATT CTATGGCCAT TTGTATTATC CTAATAATAT
GCTGTCATTA TAAAAGCTTG TAACTTGTGT AACATGGTAG ATGCAGCAGT ATACTGTTTC TTATTACCGC TATGTTCTTG
AAGTTAGGTT ATGTGAGATC ATTTTTTCAC CTTAAAAGAA GGTTAAATAT AAATTATTTG TCAACTTTAT TTCTTTTTGT
TAAAAAAATT TATTAAAGAG AGACAGTGGT ATGCAGGTGA TACATGATCA TCTGGTGTCA TGGAAGAGAA AAATGCAAAT
TATTGTTCCC AGGTCAAGTT CAAAGTCAAT TACTAATTTG TTACATGGTT CACATCACAT GTGAGGTTTT TTGCGGTTGA
AACATTTGGC AGTAGCTTCA TGAGAGGACA AAACATTTAG AAGTTGATTG TGACTGCGTT AGATAAAAAT TCTCTTCATG
GCCAAAGAAA GCTTTCTCTA TTGCAAAATT CTATTATAAG TCTTCAAATA TCTTAAATAT GCAACGAGTT AGAGTTTTGT
AAAATTTGCA TGCTCCAAAT AGAATGAAAG TATTCAGGTA TTACAGATGC TGTATTATTT GCAATCAATT TTCCCAATTT
CCTATAATTC TGGCAGATTC TCTTCCCTG

>Vigan.03G247200.01
ATGACACACA GATTATCTTC CATATTCCAA GTACAGAAAG GACCAAACTT GAGAAGTCTC TTGAGTTTGC AACCACCAAA
TATGTCCTCC ATGGCTTTCT CCACCACCTT CTTCACTCCC CTCCATGATT TCACCCGTGC CAGAACAAAC CCACCACCTT
CTCCCTCTTT TCCTTTCATC AAATCCTCCT TTGCTTCCTC CAACTCAACC TTTTTTCATC CTTCCCTTTC CCTACGAACC
TCATCAACTT TTCCAAGGCT CTTCATAAAG CCTAGGTCTT TCTCAGTTCA TGCCAGAGCT GCCACAGAAA AGACCATCTA
TGATTTTACT GTCAAGGATA TTGAGAGAAA GGATGTCGCT CTTAGCAAAT TTAAGGGGAA GGTTCTATTG ATTGTCAATG
TTGCTTCACG ATGCGGTTTG ACGTCATCGA ATTACTCGGA GCTGTCTCGT TTGTACGAAA AGTATAAGGA TCAAGGTTTG
GAGGTTCTAG CTTTCCCCTG CAATCAATTT GGTATGCAGG AGCCTGGATC GAATGAAGAA ATTAAGCAGT TTGCTTGCAC
TCGATATAAA GCAGAATTTC CAATTTTTGA CAAGGTGGAT GTCAATGGAC CATTTACGGC TCCAGTGTAC AGTTTTCTGA
AATCTAGTGC TGGAGGCTTT CTGGGTGATC TTATAAAGTG GAATTTTGAG AAATTCTTGG TTGATAAAAG TGGTAAAGTT
ATTGAAAGAT ACCCACCAAC AACGTCGCCT TTCCAAATTG AGAAGGATAT TCAGAGGTTA CTTGCTGCAT GA

>Vigan.03G247200.01
MTHRLSSIFQ VQKGPNLRSL LSLQPPNMSS MAFSTTFFTP LHDFTRARTN PPPSPSFPFI KSSFASSNST FFHPSLSLRT
SSTFPRLFIK PRSFSVHARA ATEKTIYDFT VKDIERKDVA LSKFKGKVLL IVNVASRCGL TSSNYSELSR LYEKYKDQGL
EVLAFPCNQF GMQEPGSNEE IKQFACTRYK AEFPIFDKVD VNGPFTAPVY SFLKSSAGGF LGDLIKWNFE KFLVDKSGKV
IERYPPTTSP FQIEKDIQRL LAA*