GBrowse Details

Vigan.03G243300.01

Basic Information:
Name: Vigan.03G243300.01
Multiple alignment
Variant Information
Position: Chr03:37987752..37993091 (- strand)
Length: 5340
Functional Information:
Description: Similar to protein phosphatase 2C 59 isoform X3. [XP_006596058.1, Glycine max]
GO: Biological Process: protein dephosphorylation (GO:0006470)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: protein serine/threonine phosphatase activity (GO:0004722)
InterPro: Protein phosphatase 2C, manganese/magnesium aspartate binding site (IPR000222)
Protein phosphatase 2C (PP2C)-like domain (IPR001932)
Protein phosphatase 2C (IPR015655)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:24.44,17.90,24.82,17.73,17.75,29.95,17.83,17.97
Automatic updates:
Name: NM_001255861 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max probable protein phosphatase 2C 59-like (LOC100807396), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:37987752..37988835 (- strand)
Length: 1084
Type: three_prime_UTR
Position: Chr03:37988836..37989102 (- strand)
Length: 267
Type: CDS
Position: Chr03:37989611..37989702 (- strand)
Length: 92
Type: CDS
Position: Chr03:37989788..37989874 (- strand)
Length: 87
Type: CDS
Position: Chr03:37990599..37990757 (- strand)
Length: 159
Type: CDS
Position: Chr03:37990873..37990971 (- strand)
Length: 99
Type: CDS
Position: Chr03:37991488..37991615 (- strand)
Length: 128
Type: CDS
Position: Chr03:37992273..37992481 (- strand)
Length: 209
Type: CDS
Position: Chr03:37992482..37993091 (- strand)
Length: 610
Type: five_prime_UTR

>Vigan.03G243300.01 class=Sequence position=Chr03:37987752..37993091 (- strand)
TTTTAAACTC TTACTTACTA CATTTTATTC AATCGAAATA AATACGATTT TGTTTGAAAG AAAAAGAAAT TTTCTGATTT
CAATTGGTTT CTCATTAAAC TCAGAAATTT CAAAAAAGTT TTTTGGATGT AAATTATGAG TTAATTTACG AAAAGATGGT
GTTTGAATTC GTTGAACAAG ATTGTTGGTG GAACAAACAA AACCATGAAG CTAACTTGAA CTACAAATGA AACAGAATCC
ACCCTGTTTT CTCACCCTTG CTGTAACCTC TTCTCCTTTC TCTCTCTTCT TTGTGTCATG CAATTTCTTC CCTGTTCTCT
TTATAGGGTA CTTTCCCTCT TTGTCTCTCT CCCTAACTGC AGGGTTTACC GTGTTCAATA ATTATTCTCA CCAAATCCCA
ACTCAGTTCT GAATTTGATT TGGTTAACGA TACCAAGATC CAAGCATAAA TTTTTTTTTT TATCCTTTTG GGTGGAACAA
AGTTGGAGCC TTTTTCCGAA ATTTATCTGC TTTGTGATAT TAACTGCACT CTCTTCCTTG TGGGGTTTCT GTGCAGATTA
AACTTGGGAT TGTTTGATTA TTCCGAAATG ACCCCACACC ACTTAGTGTT ATGATAACTT GGAACCTGTT GCACGCAAGA
ATAAGTTGGA CACACGCAAT AGCGCTATTA TTTCTTCATT TTTTGTTGTT GGTCAAAGAA ATAGTACCTG GGAGCCCTGA
ATATTCAAGC TGTGATATGG GGTACCTCAA TTCAGTCTTA TCCTCTTCAG GCCAGGTTCA TGCCACAGAA GATTCACCTG
TCAGCGGAGG GGGCCTCAGG TTTGTAATTG TGTTCATCTT TCTGTAGATC TAGAGTTGGT TCAGTATACT GAAGATTTAG
AGTGTTTATT TGATGGTTAC AATTATTGAT GTTGGTTAAT GTTATTCTTT CTAGTTAGTT TTGTGTCGAA TTCTTTGCTG
TTCTATGTCC GTTTTGTTGT ATCATCCCAT GTGTTGCTTT GCAGATTCAC GATCATAGTT CTGTTCTCTG CTGTTCTTTT
TAGTGTGGAT TTTGTGAAAA TGGTCAGAAG CAAATTTACT GTAGTTTTTC TTTGTATAAT ATAATTGTTT GTAGAGGGGC
CATGGTTGAT GTAGAACTAG TCATTCTTTG TTTTGTTGAA TGTCATTACT AAGTTCTGGT TTTTCTATTT CTTATCCGGT
TTTCCGTTTT TACATTTGAT TCTCTCTATC TTATTGGCCA TAAATTATAT TGGACAATGT TAAAATTTAT ACTCTTGCTG
AAATGAATGA CTACCCTTTG CTGAATTTTT TCTGCTATGT CAATGATTGA AAATAGATGG TGACTTATGC GTGCATAATT
CAATGGTTAT AGTCTTATTG ATGATATATG ATTTTAATTT GTCTTCTTTA TATTCCTTTC TTTTGGCTGA TGGAATGATA
CGGTTTTGAC AAATTTATTA TGAATTGTAA CTGCAGTCAG AATGGCAAAT TCAGCTATGG GTATGCTAGC TCCCCTGGCA
AGAGATCATC AATGGAAGAT TTTTATGAGA CAAAAATTGA TGGCGTTGAT GGTGAAATTG TTGGCCTTTT TGGAGTTTTT
GATGGTATTT TTACATAACA CTTTTATCGC CTTAGCCTTG TATTGTATCC ATGCTACTTA TGCTAAGAGA AAATTCCAAG
ATGGCGGAGT AGCTAATGTA TATTAATTGG AAACTTGGAA ATTGTTTTCT TTAGAGATGA TAAATGTGAT TATTTCAATC
TGACTATGGA ATGTTTAATT GTTATGATTG GCTATGGTAC TGTTTTCTGC ACACCACGAA GGAATTCTCC CTGTAGGTTC
TTTATCTAAG CAATATGTAT TTGAGCATAA TTTCCAGAGG CTTTAACCAT TATCCTGTAC TTTCTCTTTC TAGTATTCCT
AATCGTTACA AAGAACCTTC ATGAGTTCCT TATAGTGGTG ATTATGTGTG CTGAGTGTTT CTTTGTTTAG TTTTTCATTT
CTATCATTTA GACATGTAGG ATTTATGTAC TGTTGGCTAC ATATAACCTA TACTTGATAC TGTGTTTTAT TGGCTAAAAA
TGTAAAAGGT GTCTATAACA CTCTTTGTTG AAACTTTCAG GTCATGGAGG TGCTCGTGCT GCCGAGTATG TCAAGCAAAA
CCTGTTTAGC AATTTGATCA GACATCCAAA ATTCATTTCT GACACCAAAT CTGCTATAGG TCTATAATTT CCTACTCATG
ATATGGCATC ATGATCCTTA GCCTGATGTC TTCCAATGTG ATAAATTCTG AGAATAACTT TCTTTTCCTC CTGTCAATTT
GTTTTTCTTC GCAGCTGATG CATATAACCA TACCGACTCT GAATTTCTGA AATCTGAAAA TAATCAAAAC AGAGATGCTG
GATCAACTGC TTCCACAGCC ATTCTTGTCG GAGATCGATT GCTTGTTGCA AATGTTGGGG ATTCCAGAGC TGTTATATGC
AGGGGTGGAA ATGGTAAGGC TTGTTGTCTT GTATTGTAAA TTCTTGCTTA GTTGCATAGA TTGTATTACA GATATTGTTT
CACAGTAATT TTAGTTTTCT GACACCTTGA TGACATAATA ATTGTAATGC CTATACTTAA TATTTGTATT CTCTCTGCAT
GCTAATGCCG ATACTTAATA TTTGTATTGT CTCACCAAAT TTACAGCCAT TAAGTAATCA TTTTTCTATT GTGTTTCCAT
TTCCTTGCAT CTATAAGTTT ACAACTTTTA GGCACTCGTA TCATATGCTA TTTAGAAAAC ATTAAATATG TGAAACTCTA
CAGACTGCAA AGTGATAACT ATTTATTTCA GGCTTATCTT AATATATAGT TTAATTTTAA GTGTTTAATC ATTGGCTTTT
CATAGTTTAT ACATTGGGAT GTTCTTTATA TAATTTGACT TTCTTTTCCC TTCTAAATTT ATCTTGAATG ATTATCTAGG
TCTAATTCAT TTTTAGGAAT CAATAGCATT CACTTGGTTT TAGTTATGCC TCAATTCTTG GGGTGGAGCT GATAGATCTG
TTGGCAACTT CATTTAATAC CAATTGGTTT TAAGATGGAA TCTAACGAAG AGTATATGTG TCACAGGGGT CTGTATTTGT
ACATAGAAAT TTCTTGTGCT TTTGTTGGAT TTCTTTTTCA ACCTTCTGAA TTGAATGCTG ACTCAAATAT TTTGCTTTCC
TATGTTGTTT CATCTAGCCA TTGCTGTTTC CCGAGATCAC AAGCCGGACC AAACTGATGA GAGACGAAGG ATTGAAGATG
CAGGTGGCTT TGTTATGTGG GCTGGTAAGG TCGTCTTATA GTTAGCTTTT GTTACCAGCT TTATGGATTC ATCTGGTTTG
TGCCTGGTAA ATTTTAACAT TATGTGCAGG AACTTGGAGA GTTGGTGGCG TTCTTGCTGT TTCTCGTGCA TTTGGTGATA
GACTCCTGAA GCAGTATGTT GTTGCTGATC CAGAAATCCA GGTGAGTTTA CAATATATTT CATATATTGT TAGATCCATT
AATATCTGTG TATAGAGTGC ATGATTTACT ATATGAAACA TCCATTCAGT AAATTAGAGA CCAAACTCTG CTTCATGTGA
GAAGATGAAA GTAAAATAAA GCATAAAACA TGCTTAAAAT ATAAAGACAG TTCAGAAAGA ACTTGCATGA TGTATATAAC
AATGCATGTG GATTAATTTT ATGAACAATT TTTATGGCTT GGAAGTTCCC TGAACTTTAT TAAGGCTATA AAATATACAA
TAAATCTCTG TTGATATACC CATTGTGCAG TTAACCTTGA GAAGTTGCAT TTTAGGGCCT GAGAAAAAAA AAATGCTGCT
AACTATAGTA GTGTAATATA ACGGGTCTTC ACATGAGAGA GCTGTCTCCA GATTGGTCTT TATTCTTGTT CAAATAGTTT
GAAGTCATGC ATTTCTCTGG CCTCTTTTTG TATATGTCCC TTAACTAAAA CATGTTTGTG GTCTTGCAGG AAGAAAAGGT
TGATAGCTCT CTTGAGTTTC TCATATTGGC CAGTGATGGG CTATGGGATG TTGTCTCAAA TGAGGTTTGC AACTATTTTC
ATTTCTTTCA TGTTAGAAAC CAAACTAGAG ACCTAGGGCT CATTCTGAAA TTCTGTGCCA CACACGCAGG TTCATTGTTA
CGGATAGGTT TTTTTCTTCT GAGGGAGTTC ATTACGAAGA TATTATATAC ATGTAACATG AGCGTAACCA ACTTAAGGAA
TAGACACAAT TTTTAACCTA AAATCTCTAA GCATTTTAAG GCTTATTTTT ATTCAATGTG AGACTTAAAC TCATATTTAG
ATTGTTTCCA ACAATTATCA CTGAAAATAT GATGACCTCT ACATGATGTG TTGTTCAAGA AAATTGGCTA TCATATTCCT
AGAAAAGTTC AAGACCAAAC TTATGAATTT GTAAACTCAG AAGTCCAAGT CATGTAGTCG TGCTACTCAT CTAAATCTCA
TAATGTTATC ACCTTTATTC AGGAAGCTGT TTCCATGATT AAACCGATTC AGGACGCGGA GGAGGCAGCA AAGAGACTGA
TGCAAGAAGC ATACCAGAGA GGTAGTTCTG ACAACATTAC ATGCGTGGTT GTTCGTTTCT TGTCGAATCA AGGTGCTTCT
TCTCACAGTA ACTCTGGCTA AGTGTTGTAT TAGAAGAGCA GTGTGTATCT GGAGACAGAT AAGAAAAGGT GGGACGAGGC
AAAATCAGTT TGTTATAGTT GGTGAGAGAC ATTCCTTGTA GCTGTGTACC ATGCAAGAAC AGAAATCAAA TTTGAACTCA
CTATGGTCCT CTAGCATAGA TGTTTTCACA TTCAAACCAT TTCACTCCAT AATTGAGTCC TATTTGTAGG GAGGAAAAAA
TAGCAGTGCA AAGAGTTTAC AGTGTTTGAA TTGCTCACAC ATGACATGAT GTTTGTAAAT GTGGGATTGA TCCTATTAAT
CCCCTCTCTC CCAAACAAAC TACTAGTGTG CTTGGTTGAA CTTATGTTCC CTTTTCATTC TTAATCTGGT TTTACAGTGT
TAGTCCCATC CCATCCCATG TAACACCCAC ACTCATGTTC TACTCTAATA GTGGCTTTCA TCAACTGTAT AATAATGTCA
ATCTACTTAG AAACAATCTT CTTTCTCTTT TTCTTTTCTC ACTATTTTTC AACTGTTTAT AGCATATGCA TGAATGGATT
TAGATTATCT AGATTTTGCA AAATAACTTT TGATTAAGAT TGGGTTTCAA AATAAGGTGA AATATTTATT TAAACACAGG
GACTAAAATG ATGTTCCATT CAAAATTTCA AGTTTGATTT TATATTATCA AACATATTTT 

>Vigan.03G243300.01
TTTTAAACTC TTACTTACTA CATTTTATTC AATCGAAATA AATACGATTT TGTTTGAAAG AAAAAGAAAT TTTCTGATTT
CAATTGGTTT CTCATTAAAC TCAGAAATTT CAAAAAAGTT TTTTGGATGT AAATTATGAG TTAATTTACG AAAAGATGGT
GTTTGAATTC GTTGAACAAG ATTGTTGGTG GAACAAACAA AACCATGAAG CTAACTTGAA CTACAAATGA AACAGAATCC
ACCCTGTTTT CTCACCCTTG CTGTAACCTC TTCTCCTTTC TCTCTCTTCT TTGTGTCATG CAATTTCTTC CCTGTTCTCT
TTATAGGGTA CTTTCCCTCT TTGTCTCTCT CCCTAACTGC AGGGTTTACC GTGTTCAATA ATTATTCTCA CCAAATCCCA
ACTCAGTTCT GAATTTGATT TGGTTAACGA TACCAAGATC CAAGCATAAA TTTTTTTTTT TATCCTTTTG GGTGGAACAA
AGTTGGAGCC TTTTTCCGAA ATTTATCTGC TTTGTGATAT TAACTGCACT CTCTTCCTTG TGGGGTTTCT GTGCAGATTA
AACTTGGGAT TGTTTGATTA TTCCGAAATG ACCCCACACC ACTTAGTGTT ATGATAACTT GGAACCTGTT GCACGCAAGA
ATAAGTTGGA CACACGCAAT AGCGCTATTA TTTCTTCATT TTTTGTTGTT GGTCAAAGAA ATAGTACCTG GGAGCCCTGA
ATATTCAAGC TGTGATATGG GGTACCTCAA TTCAGTCTTA TCCTCTTCAG GCCAGGTTCA TGCCACAGAA GATTCACCTG
TCAGCGGAGG GGGCCTCAGT CAGAATGGCA AATTCAGCTA TGGGTATGCT AGCTCCCCTG GCAAGAGATC ATCAATGGAA
GATTTTTATG AGACAAAAAT TGATGGCGTT GATGGTGAAA TTGTTGGCCT TTTTGGAGTT TTTGATGGTC ATGGAGGTGC
TCGTGCTGCC GAGTATGTCA AGCAAAACCT GTTTAGCAAT TTGATCAGAC ATCCAAAATT CATTTCTGAC ACCAAATCTG
CTATAGCTGA TGCATATAAC CATACCGACT CTGAATTTCT GAAATCTGAA AATAATCAAA ACAGAGATGC TGGATCAACT
GCTTCCACAG CCATTCTTGT CGGAGATCGA TTGCTTGTTG CAAATGTTGG GGATTCCAGA GCTGTTATAT GCAGGGGTGG
AAATGCCATT GCTGTTTCCC GAGATCACAA GCCGGACCAA ACTGATGAGA GACGAAGGAT TGAAGATGCA GGTGGCTTTG
TTATGTGGGC TGGAACTTGG AGAGTTGGTG GCGTTCTTGC TGTTTCTCGT GCATTTGGTG ATAGACTCCT GAAGCAGTAT
GTTGTTGCTG ATCCAGAAAT CCAGGAAGAA AAGGTTGATA GCTCTCTTGA GTTTCTCATA TTGGCCAGTG ATGGGCTATG
GGATGTTGTC TCAAATGAGG TTTGCAACTA TTTTCATTTC TTTCATGTTA GAAACCAAAC TAGAGACCTA GGGCTCATTC
TGAAATTCTG TGCCACACAC GCAGGTTCAT TGTTACGGAT AGGTTTTTTT CTTCTGAGGG AGTTCATTAC GAAGATATTA
TATACATGTA ACATGAGCGT AACCAACTTA AGGAATAGAC ACAATTTTTA ACCTAAAATC TCTAAGCATT TTAAGGCTTA
TTTTTATTCA ATGTGAGACT TAAACTCATA TTTAGATTGT TTCCAACAAT TATCACTGAA AATATGATGA CCTCTACATG
ATGTGTTGTT CAAGAAAATT GGCTATCATA TTCCTAGAAA AGTTCAAGAC CAAACTTATG AATTTGTAAA CTCAGAAGTC
CAAGTCATGT AGTCGTGCTA CTCATCTAAA TCTCATAATG TTATCACCTT TATTCAGGAA GCTGTTTCCA TGATTAAACC
GATTCAGGAC GCGGAGGAGG CAGCAAAGAG ACTGATGCAA GAAGCATACC AGAGAGGTAG TTCTGACAAC ATTACATGCG
TGGTTGTTCG TTTCTTGTCG AATCAAGGTG CTTCTTCTCA CAGTAACTCT GGCTAAGTGT TGTATTAGAA GAGCAGTGTG
TATCTGGAGA CAGATAAGAA AAGGTGGGAC GAGGCAAAAT CAGTTTGTTA TAGTTGGTGA GAGACATTCC TTGTAGCTGT
GTACCATGCA AGAACAGAAA TCAAATTTGA ACTCACTATG GTCCTCTAGC ATAGATGTTT TCACATTCAA ACCATTTCAC
TCCATAATTG AGTCCTATTT GTAGGGAGGA AAAAATAGCA GTGCAAAGAG TTTACAGTGT TTGAATTGCT CACACATGAC
ATGATGTTTG TAAATGTGGG ATTGATCCTA TTAATCCCCT CTCTCCCAAA CAAACTACTA GTGTGCTTGG TTGAACTTAT
GTTCCCTTTT CATTCTTAAT CTGGTTTTAC AGTGTTAGTC CCATCCCATC CCATGTAACA CCCACACTCA TGTTCTACTC
TAATAGTGGC TTTCATCAAC TGTATAATAA TGTCAATCTA CTTAGAAACA ATCTTCTTTC TCTTTTTCTT TTCTCACTAT
TTTTCAACTG TTTATAGCAT ATGCATGAAT GGATTTAGAT TATCTAGATT TTGCAAAATA ACTTTTGATT AAGATTGGGT
TTCAAAATAA GGTGAAATAT TTATTTAAAC ACAGGGACTA AAATGATGTT CCATTCAAAA TTTCAAGTTT GATTTTATAT
TATCAAACAT ATTTT

>Vigan.03G243300.01
ATGATAACTT GGAACCTGTT GCACGCAAGA ATAAGTTGGA CACACGCAAT AGCGCTATTA TTTCTTCATT TTTTGTTGTT
GGTCAAAGAA ATAGTACCTG GGAGCCCTGA ATATTCAAGC TGTGATATGG GGTACCTCAA TTCAGTCTTA TCCTCTTCAG
GCCAGGTTCA TGCCACAGAA GATTCACCTG TCAGCGGAGG GGGCCTCAGT CAGAATGGCA AATTCAGCTA TGGGTATGCT
AGCTCCCCTG GCAAGAGATC ATCAATGGAA GATTTTTATG AGACAAAAAT TGATGGCGTT GATGGTGAAA TTGTTGGCCT
TTTTGGAGTT TTTGATGGTC ATGGAGGTGC TCGTGCTGCC GAGTATGTCA AGCAAAACCT GTTTAGCAAT TTGATCAGAC
ATCCAAAATT CATTTCTGAC ACCAAATCTG CTATAGCTGA TGCATATAAC CATACCGACT CTGAATTTCT GAAATCTGAA
AATAATCAAA ACAGAGATGC TGGATCAACT GCTTCCACAG CCATTCTTGT CGGAGATCGA TTGCTTGTTG CAAATGTTGG
GGATTCCAGA GCTGTTATAT GCAGGGGTGG AAATGCCATT GCTGTTTCCC GAGATCACAA GCCGGACCAA ACTGATGAGA
GACGAAGGAT TGAAGATGCA GGTGGCTTTG TTATGTGGGC TGGAACTTGG AGAGTTGGTG GCGTTCTTGC TGTTTCTCGT
GCATTTGGTG ATAGACTCCT GAAGCAGTAT GTTGTTGCTG ATCCAGAAAT CCAGGAAGAA AAGGTTGATA GCTCTCTTGA
GTTTCTCATA TTGGCCAGTG ATGGGCTATG GGATGTTGTC TCAAATGAGG TTTGCAACTA TTTTCATTTC TTTCATGTTA
GAAACCAAAC TAGAGACCTA GGGCTCATTC TGAAATTCTG TGCCACACAC GCAGGTTCAT TGTTACGGAT AGGTTTTTTT
CTTCTGAGGG AGTTCATTAC GAAGATATTA TATACATGTA ACATGAGCGT AACCAACTTA AGGAATAGAC ACAATTTTTA
A

>Vigan.03G243300.01
MITWNLLHAR ISWTHAIALL FLHFLLLVKE IVPGSPEYSS CDMGYLNSVL SSSGQVHATE DSPVSGGGLS QNGKFSYGYA
SSPGKRSSME DFYETKIDGV DGEIVGLFGV FDGHGGARAA EYVKQNLFSN LIRHPKFISD TKSAIADAYN HTDSEFLKSE
NNQNRDAGST ASTAILVGDR LLVANVGDSR AVICRGGNAI AVSRDHKPDQ TDERRRIEDA GGFVMWAGTW RVGGVLAVSR
AFGDRLLKQY VVADPEIQEE KVDSSLEFLI LASDGLWDVV SNEVCNYFHF FHVRNQTRDL GLILKFCATH AGSLLRIGFF
LLREFITKIL YTCNMSVTNL RNRHNF*