GBrowse Details

Vigan.03G202300.01

Basic Information:
Name: Vigan.03G202300.01
Multiple alignment
Variant Information
Position: Chr03:32141510..32146725 (+ strand)
Length: 5216
Functional Information:
Description: Similar to Uncharacterized protein. [Q0EDG6, Glycine max]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: oxidoreductase activity (GO:0016491)
Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (GO:0016706)
InterPro: Oxoglutarate/iron-dependent dioxygenase (IPR005123)
Non-haem dioxygenase N-terminal domain (IPR026992)
Isopenicillin N synthase-like (IPR027443)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.07,0.47,56.49,78.36,0.02,13.53,0.2 4,40.08
Arabidopsis thaliana homolog: AT5G08640.1
Automatic updates:
Name: NM_001250490 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max flavonol synthase (FLS1), mRNA.
PubMed ID: 18414005 NCBI(pubmed)
17006592 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr03:32141510..32141861 (+ strand)
Length: 352
Type: five_prime_UTR
Position: Chr03:32141862..32142367 (+ strand)
Length: 506
Type: CDS
Position: Chr03:32145970..32146297 (+ strand)
Length: 328
Type: CDS
Position: Chr03:32146410..32146622 (+ strand)
Length: 213
Type: CDS
Position: Chr03:32146623..32146725 (+ strand)
Length: 103
Type: three_prime_UTR

>Vigan.03G202300.01 class=Sequence position=Chr03:32141510..32146725 (+ strand)
ATTATTCTAA AAATATATCT TAGATTAAAT AAGTATTTTT TCCACACAAT TAATGAGAGT GTTTTTAATT ATATTTTTGA
GAGATCATAA CAAATTACCT AAAAAATAAT TTAATTAGGT AATATAGAGT TGATAGGTTT CATTATTGGA TGGAAAAAAG
CATGAGAATT AATAGTACTA TAGCACTGAC AACATATTTG GTAGCACTAA CGTGTGGTAA TGGGCTGGGA AGAGTTTCAC
TTGGGCAAAG GCAAGTGCAT CATTTATTGG TAATGAATGA GACTTGGTAA AATGTTAGGT GGTGGTTTAA GTTGTATAAA
GTGAAAGGAT GAAAAGCTGT TAGATATATA GAATGATTAA GGAAGCAAGT CCATTTTTGA CGAGAGCAAG AAAGATGGAG
GTGCTGAGGG TTCAAACCAT TGCTTCACAA GAGAAGGATG GTGCAATACC AGCCATGTTT GTTAGGGCAG AAACAGAGCA
ACCGGGAATG ACGACGGTGA AAGGGGTGAA CCTTGAAGTG CCAATAATTG ATTTTAGCAA CCCAAACGAA GAGAAAGTGT
TGGATGAGAT TGTGGAGGCA AGTAGAGAGT GGGGCATGTT TCAGATTGTG AACCATGAGA TTCCTAGCCA TGTTATAAGG
AAGTTGCAGA GTGTGGGGAA AGAGTTCTTT GAATTGCCTC AAGAAGAAAA AGAGTTAATT GCTAAGCCAG CTGGGTCTCA
TTCTTTGGAA GGTTATGGCA CAAAGCTTCA AAAGGAGACC AACGGTAAGA AAGGTTGGGT GGATCATTTG TTCCACATTC
TGTGGCCACC TTCCTCCATC AATTACCATT TCTGGCCCAA GAATCCCCCT TCTTACAGGT TAGTTTTTAA CATTATATTA
TTCAAATGCT TTATACTCTA TATCTGTGAG TTATTATATA TTCTTTTCAT AAAATTTCAA GGTTTAATTA TTTATTTACA
TTTTATAATC AAACAAATTT CACTTATCAT TTCTATGCGT AAAATGATAT ATTTTAATTC TTAAACATTT TATTTCTAAT
TTTTTAAAAT CTTATTATAT ATATATATAG TATTTTGTTT TTAATTTTTA TTACTCTTAC CTTATGAATT TATAAATACT
GAAAGATATT AAAAATCATA TATATAGGAA TTTAAATTAT AAAAATAATA ATTTACAGCA TAAAGCAATA CAACTGGTTA
ATGAATGAGC AGCCGAGTTG TTAATCAATT TTTAATTTTG AGTTAAATAT AGAAATACCT AAATAACTAA ATTTAAATTT
TCTTCATACA AAAAAATGCT CTTAATAAGA TATGGAAATT GACATTTTCT CTTTGGTTTT TTTAATGATA ATAATAATGG
TGGTAGTAAG ATTTAATATA AGAGATTGAG TATAATGAAT TCTTGTTTTT TTTTTCTTTC ATTAGAATAA TAACATTTAA
GTCAAATATT AATAAAGAGA AAAAGATTTT TTTTTTTTGG TAAAAGAATA ATTGTAATTA TATGTAATTT TTTTATTATA
GAAAAAACTA AAAATAACAC GTTGTTTAAA TAAAGAATTT TAGTAAATAA TTCTTATAAA TTTGTAGGAT TAAATTAAAT
TTTATCATAA TAGTTATTAT TGGAACCACT AATTTTATTA TATATTTTGT TTGAAAATAG TTTCTCACAG ATCTGGTTTG
GACGGTTTAA AACAAGAGCA TAATTTGTAG TCTATATAAT GTTTTATATT ATTAACTAAA AGAATTTAAT AATATTATTT
TAAAATAGTT ATTATTTGTT ATAAAATTTA ATAAACAGAA ATTTCTTCTA CACTATGTAG ATCTGTTCAC TTTTAAAACA
CTAACTGCAA AAAAATTCTG TCACATATTA ATTTGTGGTG AAACACATGA ACACGTTTGT TTAGATTGAT AGGGTGATAG
CATGTGCAAA CTCATGGAGA GGCTGAGGTA TAGTGGGGCT ATGTGATTCT AAATTCAATG CAGCAATAAA TTTTTGACCG
CTTGTTACCC TTATTTGGGT TTGTTTAGAT TTGATAGGGT GATAGCATGT GCAAACTCAT GGAGAGGTTG GGTACACATG
TAATTCTAAA TTCAATGGGG GAAATAAATT GTTGGCCGCG CTGCATGTTG CATGTTACCC TTATTTGTAA GTTTAATGTT
ACAATAATGA GCCTTTTTCT CTAATTGGAA AACACTTATC TCATGATCTG ATTAATGCCC AACTCTTTGG CCAAATTATC
CTAAACAAAT CACATTTCTT TTATTTCATT ACTATTTATT ATACAATTTT AGAATCTCCA TTTGGCTACT GCAAATAAAT
ATCCAAATCT TTTTTCTTCT CACCACAACT CAAATATAGT TGAATAATAA TTAATTGATT AAAATAAAAT CAGAAATCAA
AAGAGAGTAA CTAAATATAA TAGTATTATG AAACATTTTG AAAAATGCCA TAGTTTACTT TGTAATTTAA AAAAAAAACA
GGACCCTTGA CTTAAACTTT ACAAATTTAG AATAAATCTT TGTTAGCCTT CCTAACTTTC CAATTGAAGA TGTAATAAGT
TTTTATAACT TATTTATAAA ATTATGAAAA TGTGAAATCT TCGTTATTCA ATTCGACTTT TTTATAAATA TGTTTCACTA
AAGTTATCCA AAGTAATTAA AACTTTCAAT ATGTAAAATG TTTTTTCAGT AATAATCGAG GTTAATCTAT AAATTAAAAA
TGTTCACCAC TCTTATATTT ACAAATAAGT CTTTATGAAT CATGACGTCT TCGTTTTTTA AAATTTTTTA TGAAGAAGTC
GTTGGAATTT ATACTAACTT CAATTCAAAA ATCATAAAAA CTCATGACAA ATCATCCTAA ATCTATAAAT TTTAAGTCTA
CTGTCTCAAT ATCTTTTTTA AATTACGATG TAAATTTTTC TATTAGTGAC TTCTCACAGT AAAAAAAAAA GCTTAAATAC
TTATTTCGTT CTTATGTTAA GAGGTGAATT TCTGTTTAGT ATTATTTCGT CCCTATGTTA AGAGGTGAAT TTCTGTTTAG
TATCCGGTTT TAAAAATGCA TCTATTAAGT CCCAAAGTTG TAAAAATTGT ATAAATGAAG TTCCTTCCGT TAAATTGCCT
TTAACGGAGT TAATTCCACA CTCACGTGCC TATAAAATAT GAATTTTTTT CTTCTCTCTC ATCTGCTCTT TTTGTAACGT
TTCAACTTTT TCTCTCACTT CTATTTCCAA TCATTCATCT CTGGCTCTCT TATGCAACTC CTTCTTCTCT CCCTTTCTTC
TCCATCGTCC CTCACATCTT TCTCGTCAAT TTTTGTGTGC CAAAGCTTCT TAAGCTTTTC CTCCCACGAA TCTAAAGCAT
AGCAGAGTGC TTCTTCTGGA ACTTCCGTCG CCACTGCTCC TTCTTCCTTC ACCTCTTTCG TTGAGTCTAG GCCCCTTGAC
CCAGCCTTCA ACTACGCCAT CGCCAACCCC AACAGCAGCC TCCTCGTTAG GTTCGTTCGA GCCACCGAGT CTTCCATTGA
AAGGGTATTG CTCCATTGAA GCCTCCTACG GCTCCACGCG CACACGTGGA CGAAGCCTCT GACGCCTTTG CCACAACACA
TACACGATCT CCGCGGCCAG GGCCACCAGA GTAAACGCCG TCACCGCCAT TATCACGGTT CCGAGCTTGC TCAGACCCAT
CATCGTGAGA GAAAAAGAAA AGCACGACAA CGTTGTTCTG CTGCTTCCTA CTTTTGTGCG GTTAGTTGTT AGTCTTGGGT
CTTTGTCGTT TCGTTGCAAA AGCCAAAAAG GTGTAATGGG AAATGTAGGT TTTGGCGTAA AACTAAAAAA AAACAAAGAA
GAGAAAAGCG AAGTTTGATA GATAGATGGT CTGTGTGTGT TGGGTTTGCA GGTTAGGTTT AAAGGTGGTA GATGGATAGT
TGGACAGAAA ACGATGTGTT TTCCTAGGAA ATGTGGGTGT TATTATTGCA CTATGACTTT TAATTTTTTC TTTTTACAAA
ACTTTGAATC TAATGTATTG CAAAAGAAGT TTTTAAAACA TCTAAAGAAG TAAATATCAA GGGTTGTGAG GGAGAGAAGA
TGTGAGGGAC GATGCAGAAG AGAGGGAGAG AAGAAGGAGT TGCATAAGAG AGCCAATGAT TGGAAATAGA AGTGAGAGAA
AAAGCTGAAA CGTTGCAGAA AGAACAAATG AGAGAGAAGA AAAAAAATTC ATATTTTATA GGCACGTGAG CGTGGAATTA
ACTTCGTTTA AGGTAATTTA ACGGAAGAGA CTTCATTTAT ACAATTTTTA CAACTTTGGG ACTTAATAAA TGCATTTTTA
AAACCGGGTA CTAAACAAAA ATTTACCTCT TAACATGGGG ACGAAATAAG TATTTAAGCC TAAAAAAAAT GTTGAATCAT
TGTTCCTGTA ATTGAGTAGA AACTATACTG AAAAAGAAAA TGGTGAATTT GATTTTCCAG GGAAGTGAAC GAGGAATACT
GCAAGTATCT ACGTGGGGTG GTGGACAAAT TATTCAAAAG TATGTCAAAA GGGTTGGGGC TGGAAGAAGA TGAGCTAAAG
GAAGTGGCAA ATGAAGAAGA AATGCATTAC CTTTTGAAGA TCAACTATTA CCCACCTTGT CCTTGTCCTG ATCTTGTTTT
GGGTGTGCCA CCACACACAG ACATGTCCTA CCTCACCATT CTCGTACCCA ACGAGGTGCA GGGCCTCCAA GCTTCTAGGG
ATGGTCGATG GTACGATGTT AAGTATGTTC CCAATGCCCT CGTCATTCAC GTTGGTGACC AAATGGAGGT AAATTTAATC
CTTTCATAAG CATTTTCTGT CAATCAAAAT ATCTTCTCTT TTCACTTTAT TTCGATCACA AAATTGTGAT GTATATTTAC
TTTGTTTCAT GGTGGTATAG ATCCTTAGCA ATGGAAAATA TAAGGCAGTT TTCCACAGAA CTACAGTGAA CAAAGACAAG
ACAAGAATGT CATGGCCAGT GTTCATAGAG CCCAAAGCAG AACGTGAGGT TGGTCCTCAC CCAAAGTTGG TTAACCAAGA
CAATCCTCCA AAATACAAGA CTAAGAAATA CAAGGATTAT GCTTACTGTA AGCTCAATAA GATCCCACAG TGATTGAATA
CGGCATTACG AAATAAAAGC CAATAATGCT TTCCTTGTTG GTTTTGTAAT TTATGAGATT TAAGTGTAGC TTGTGCGATG
CAGACTAATT AATATA

>Vigan.03G202300.01
ATTATTCTAA AAATATATCT TAGATTAAAT AAGTATTTTT TCCACACAAT TAATGAGAGT GTTTTTAATT ATATTTTTGA
GAGATCATAA CAAATTACCT AAAAAATAAT TTAATTAGGT AATATAGAGT TGATAGGTTT CATTATTGGA TGGAAAAAAG
CATGAGAATT AATAGTACTA TAGCACTGAC AACATATTTG GTAGCACTAA CGTGTGGTAA TGGGCTGGGA AGAGTTTCAC
TTGGGCAAAG GCAAGTGCAT CATTTATTGG TAATGAATGA GACTTGGTAA AATGTTAGGT GGTGGTTTAA GTTGTATAAA
GTGAAAGGAT GAAAAGCTGT TAGATATATA GAATGATTAA GGAAGCAAGT CCATTTTTGA CGAGAGCAAG AAAGATGGAG
GTGCTGAGGG TTCAAACCAT TGCTTCACAA GAGAAGGATG GTGCAATACC AGCCATGTTT GTTAGGGCAG AAACAGAGCA
ACCGGGAATG ACGACGGTGA AAGGGGTGAA CCTTGAAGTG CCAATAATTG ATTTTAGCAA CCCAAACGAA GAGAAAGTGT
TGGATGAGAT TGTGGAGGCA AGTAGAGAGT GGGGCATGTT TCAGATTGTG AACCATGAGA TTCCTAGCCA TGTTATAAGG
AAGTTGCAGA GTGTGGGGAA AGAGTTCTTT GAATTGCCTC AAGAAGAAAA AGAGTTAATT GCTAAGCCAG CTGGGTCTCA
TTCTTTGGAA GGTTATGGCA CAAAGCTTCA AAAGGAGACC AACGGTAAGA AAGGTTGGGT GGATCATTTG TTCCACATTC
TGTGGCCACC TTCCTCCATC AATTACCATT TCTGGCCCAA GAATCCCCCT TCTTACAGGG AAGTGAACGA GGAATACTGC
AAGTATCTAC GTGGGGTGGT GGACAAATTA TTCAAAAGTA TGTCAAAAGG GTTGGGGCTG GAAGAAGATG AGCTAAAGGA
AGTGGCAAAT GAAGAAGAAA TGCATTACCT TTTGAAGATC AACTATTACC CACCTTGTCC TTGTCCTGAT CTTGTTTTGG
GTGTGCCACC ACACACAGAC ATGTCCTACC TCACCATTCT CGTACCCAAC GAGGTGCAGG GCCTCCAAGC TTCTAGGGAT
GGTCGATGGT ACGATGTTAA GTATGTTCCC AATGCCCTCG TCATTCACGT TGGTGACCAA ATGGAGATCC TTAGCAATGG
AAAATATAAG GCAGTTTTCC ACAGAACTAC AGTGAACAAA GACAAGACAA GAATGTCATG GCCAGTGTTC ATAGAGCCCA
AAGCAGAACG TGAGGTTGGT CCTCACCCAA AGTTGGTTAA CCAAGACAAT CCTCCAAAAT ACAAGACTAA GAAATACAAG
GATTATGCTT ACTGTAAGCT CAATAAGATC CCACAGTGAT TGAATACGGC ATTACGAAAT AAAAGCCAAT AATGCTTTCC
TTGTTGGTTT TGTAATTTAT GAGATTTAAG TGTAGCTTGT GCGATGCAGA CTAATTAATA TA

>Vigan.03G202300.01
ATGATTAAGG AAGCAAGTCC ATTTTTGACG AGAGCAAGAA AGATGGAGGT GCTGAGGGTT CAAACCATTG CTTCACAAGA
GAAGGATGGT GCAATACCAG CCATGTTTGT TAGGGCAGAA ACAGAGCAAC CGGGAATGAC GACGGTGAAA GGGGTGAACC
TTGAAGTGCC AATAATTGAT TTTAGCAACC CAAACGAAGA GAAAGTGTTG GATGAGATTG TGGAGGCAAG TAGAGAGTGG
GGCATGTTTC AGATTGTGAA CCATGAGATT CCTAGCCATG TTATAAGGAA GTTGCAGAGT GTGGGGAAAG AGTTCTTTGA
ATTGCCTCAA GAAGAAAAAG AGTTAATTGC TAAGCCAGCT GGGTCTCATT CTTTGGAAGG TTATGGCACA AAGCTTCAAA
AGGAGACCAA CGGTAAGAAA GGTTGGGTGG ATCATTTGTT CCACATTCTG TGGCCACCTT CCTCCATCAA TTACCATTTC
TGGCCCAAGA ATCCCCCTTC TTACAGGGAA GTGAACGAGG AATACTGCAA GTATCTACGT GGGGTGGTGG ACAAATTATT
CAAAAGTATG TCAAAAGGGT TGGGGCTGGA AGAAGATGAG CTAAAGGAAG TGGCAAATGA AGAAGAAATG CATTACCTTT
TGAAGATCAA CTATTACCCA CCTTGTCCTT GTCCTGATCT TGTTTTGGGT GTGCCACCAC ACACAGACAT GTCCTACCTC
ACCATTCTCG TACCCAACGA GGTGCAGGGC CTCCAAGCTT CTAGGGATGG TCGATGGTAC GATGTTAAGT ATGTTCCCAA
TGCCCTCGTC ATTCACGTTG GTGACCAAAT GGAGATCCTT AGCAATGGAA AATATAAGGC AGTTTTCCAC AGAACTACAG
TGAACAAAGA CAAGACAAGA ATGTCATGGC CAGTGTTCAT AGAGCCCAAA GCAGAACGTG AGGTTGGTCC TCACCCAAAG
TTGGTTAACC AAGACAATCC TCCAAAATAC AAGACTAAGA AATACAAGGA TTATGCTTAC TGTAAGCTCA ATAAGATCCC
ACAGTGA

>Vigan.03G202300.01
MIKEASPFLT RARKMEVLRV QTIASQEKDG AIPAMFVRAE TEQPGMTTVK GVNLEVPIID FSNPNEEKVL DEIVEASREW
GMFQIVNHEI PSHVIRKLQS VGKEFFELPQ EEKELIAKPA GSHSLEGYGT KLQKETNGKK GWVDHLFHIL WPPSSINYHF
WPKNPPSYRE VNEEYCKYLR GVVDKLFKSM SKGLGLEEDE LKEVANEEEM HYLLKINYYP PCPCPDLVLG VPPHTDMSYL
TILVPNEVQG LQASRDGRWY DVKYVPNALV IHVGDQMEIL SNGKYKAVFH RTTVNKDKTR MSWPVFIEPK AEREVGPHPK
LVNQDNPPKY KTKKYKDYAY CKLNKIPQ*