GBrowse Details

Vigan.03G201800.01

Basic Information:
Name: Vigan.03G201800.01
Multiple alignment
Variant Information
Position: Chr03:32087196..32089885 (+ strand)
Length: 2690
Functional Information:
Description: Similar to protein. [F2E3J7, Hordeum vulgare var. distichum]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:6.31,4.81,13.56,7.61,15.98,16.80,13. 65,15.00
Arabidopsis thaliana homolog: AT1G21930.1
Automatic updates:
Name: NM_001250968 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527306 (LOC100527306), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:32087196..32087535 (+ strand)
Length: 340
Type: five_prime_UTR
Position: Chr03:32087536..32087585 (+ strand)
Length: 50
Type: CDS
Position: Chr03:32088548..32088782 (+ strand)
Length: 235
Type: CDS
Position: Chr03:32088783..32089885 (+ strand)
Length: 1103
Type: three_prime_UTR

>Vigan.03G201800.01 class=Sequence position=Chr03:32087196..32089885 (+ strand)
AAAAAATTAA AGAATAGAGA TTTAATGTTA GAAAATGTAA CTTTTCTGAA TACTAGACCA TAAAATTTTA TAAAATTTCA
ATTAAAAGTT TTCAAATTTA ATAAAAACTT AAAACTTAAT TAAATTGACG ATAGATATCT TTTGCGAAAA AAATAATGTA
AAGTAAACTG TAATTTTGAT ATATTTGTGA CTGCGTCTGC AAAACTGTAT TTTTTTCTAA TTGGTCCTTC TTAACAGACA
CCTCTCTCTT TGGACACGAC TAGCATTCGA AATCGAAGCA AAGTGAAAGG GCACAGTTTT TATTCCTTTT TGCCTTCTCC
GCTTAAAGTT TCTGCCGAAA ATGGGAAGCG AAGATAATGT GAAGCATCTT GAAGACTGCT CCGTTTCTAA GTCAGTGATC
CTTTTTCTTT ATCTCTGATT TTTGTGTGGC AGTTTTCTCC ATTTAATGTT TACTTGATTT CATAACCCAT CTCACCAATT
TGACTGTTTA TTAGAAATCT AGTATTGGTT AGATACTCGA TACCATCTTT TTTAACACCG CATTAATAGG GAAATCAAAT
TTAATTTTAG AACTAGTTAG AAACTAGGAA AAGTAATGAA CTTTCGGAAT TAGGGATCCT AATTTGCAGT CACCTTTGTT
ATGGGACAAC TTCGTTTCCA CGAGTCACCA TTTCAATCCT CCAAAATAAA TTGTTCCAAA TTATTCTGAC AAAGTACAGA
AAGTTCACCA AGTTCACCCA TTTTGTTTCA CCATTTTGGT CCTCTTGGGG ACAAATTTGA TGATGTTTTA AATCTTTGAT
ATAACATTTG AAATAAAAAA TCTCTGAAAA ACTAACATGG TGATGACATG CTCAAGATGA AGTTGAAGAT ATATACTAAA
TTATTGTCAT GTATTGTCAA TCAGATGGGG ATTTTTGTGT CAGTAAATCT CTGTACGCTT AAGTTGCTAG TCAATTGACA
ACAATTGTAT CTTAGTTGAT GAATTTAGTA TTAGGTGAAA TCATGATGTC CATGGTCATC ATGGTTACTC CTCCAGTGTA
AAATGGCATC TATCTACTCA AACCAAGGAG AAAATAATTT GGTTCCAATT TAAGCATTAC AGAAAAAGTT CTTAACACAT
TGCAATGATG CTTAGTCCCT CACTTCTTAA CCCTGCCCTC GTTTATAATT ATTTGGTTTT CTTGTGACTT GTGAATTCGG
GTAAGATTGA TACCCTTTTA AATGATTTAT ATTTTGCTTG TGTGGAAATA TTTGGTTTCT TTGATGTTTA AGTTTGTCTA
GTGCACAATG CCATTTTACT ATTTTCAAAG GTGAATTTTC TTAAACTCTT ATTAAACATG GAAAGTTTGC AGTGCATTAG
GCACTTGGGT GTTCTCAGTT GCAGGAGCAT TGTTGGCTAT TCCAGTTGGC ATAAAGCGCA AATCTCTAGC ACCCCTTGTA
TTTTTTGGCA CCACAGGTAC TATGTTGGAT ATTATTATGG GGATCACTGC TTGCGAAAGG GAACACGCAG AGCGCCAAAT
GAAGCTACTT GAAGCGCAAA ATGCTGCTGC CGAAACTTCC TTGGGTGAAA CAGAAATTGA TTCATAAACC GCTATCTTGA
AGTTGTCAGC ATTGTCAAAC TTGTTTGGGC ATGATTGTAA CAAACTAAAT GCACTTTTCT GGTGGTCACT AGTCAAATAT
TCTTCTACTT GATGTTTTTT TTATATCCTT TTACGGTTTT TCCTCCAGCG GTGTTTAAAA AAGAAGGTGG ATATGATGGA
TTTCCGTGTT AATTCATAAA GATTTCAGGA ATGTTTGATC ACAATGTGTT TCTTATACAA TGGTAATTAA AAAACGCCAT
TATTAGATCC TTTTTGGGAC TTTTGAGGGG CAAGTTGTAC ATCGAATAAA TGGAGCAGTG AACTTCTTAT TTTGTTTTAT
CTAATTCGAT TTCTCCTTTC TCATGAGCTA TTGTCACATA TAAGATTTGC CAAACTAACA TTTTTAGTTT TCCTTTGGGT
ACAAGTCTTG AAGGATGCGT ATGGATAAGT TCTACCCGAT TGCCTGTGCA CTCGTGCATC TCATGCTTTT TTCTGTAAAA
TGTTTTCAAA GCATATGTGA AGCTATATTC GATTGTGCTT TCCATTTATT TATTTCTCCA ATTTAAAATT TTGTAAGACT
CCAACATAAT TTAAACTCAT GAAAATATGA AATTCTTTAG TTCTTATGAA AATGATTGAT GACAACCCCT TTAGGAACTT
TTCATCCAAA GACGTATCAA ATTAACACTA AGACTAAGAA AGGGAAGTTG AAAAAGGACT TTTAAACAAA AGCATCTTTT
TTTTCTAAGT CTTAGAATGT TCTCTTTACC TAAATACATT TACCTTATTT TGTAGGTCAC CAATAAAGGT GGGAAACCAT
GTCTATATAC CTTGAAAGAC TAGCCAAGCA AAGGAGAACA AAGGAAGCAA TGAAGAGTGC ATCTGCTGCC AACGCTCAGC
GCACCTGCGT TACCGCTCAG CGACAACGGA TCGGCTTCTT CCCTTTGAGC ACGTTTTAAA TGTGTTTTGC CTGAAACATG
CGACCCAGCC TATGTAGCTT CTTTTGCATA CCTCTCTGGT AGCTTCATGC ATGTTGTGAA TGTATCAGTA GCTTGCTAGG
CACGCTTCTC TTACTCTATA AAAGAGAGGT TCTCCTTCTT GTAAATTGAA 

>Vigan.03G201800.01
AAAAAATTAA AGAATAGAGA TTTAATGTTA GAAAATGTAA CTTTTCTGAA TACTAGACCA TAAAATTTTA TAAAATTTCA
ATTAAAAGTT TTCAAATTTA ATAAAAACTT AAAACTTAAT TAAATTGACG ATAGATATCT TTTGCGAAAA AAATAATGTA
AAGTAAACTG TAATTTTGAT ATATTTGTGA CTGCGTCTGC AAAACTGTAT TTTTTTCTAA TTGGTCCTTC TTAACAGACA
CCTCTCTCTT TGGACACGAC TAGCATTCGA AATCGAAGCA AAGTGAAAGG GCACAGTTTT TATTCCTTTT TGCCTTCTCC
GCTTAAAGTT TCTGCCGAAA ATGGGAAGCG AAGATAATGT GAAGCATCTT GAAGACTGCT CCGTTTCTAA TGCATTAGGC
ACTTGGGTGT TCTCAGTTGC AGGAGCATTG TTGGCTATTC CAGTTGGCAT AAAGCGCAAA TCTCTAGCAC CCCTTGTATT
TTTTGGCACC ACAGGTACTA TGTTGGATAT TATTATGGGG ATCACTGCTT GCGAAAGGGA ACACGCAGAG CGCCAAATGA
AGCTACTTGA AGCGCAAAAT GCTGCTGCCG AAACTTCCTT GGGTGAAACA GAAATTGATT CATAAACCGC TATCTTGAAG
TTGTCAGCAT TGTCAAACTT GTTTGGGCAT GATTGTAACA AACTAAATGC ACTTTTCTGG TGGTCACTAG TCAAATATTC
TTCTACTTGA TGTTTTTTTT ATATCCTTTT ACGGTTTTTC CTCCAGCGGT GTTTAAAAAA GAAGGTGGAT ATGATGGATT
TCCGTGTTAA TTCATAAAGA TTTCAGGAAT GTTTGATCAC AATGTGTTTC TTATACAATG GTAATTAAAA AACGCCATTA
TTAGATCCTT TTTGGGACTT TTGAGGGGCA AGTTGTACAT CGAATAAATG GAGCAGTGAA CTTCTTATTT TGTTTTATCT
AATTCGATTT CTCCTTTCTC ATGAGCTATT GTCACATATA AGATTTGCCA AACTAACATT TTTAGTTTTC CTTTGGGTAC
AAGTCTTGAA GGATGCGTAT GGATAAGTTC TACCCGATTG CCTGTGCACT CGTGCATCTC ATGCTTTTTT CTGTAAAATG
TTTTCAAAGC ATATGTGAAG CTATATTCGA TTGTGCTTTC CATTTATTTA TTTCTCCAAT TTAAAATTTT GTAAGACTCC
AACATAATTT AAACTCATGA AAATATGAAA TTCTTTAGTT CTTATGAAAA TGATTGATGA CAACCCCTTT AGGAACTTTT
CATCCAAAGA CGTATCAAAT TAACACTAAG ACTAAGAAAG GGAAGTTGAA AAAGGACTTT TAAACAAAAG CATCTTTTTT
TTCTAAGTCT TAGAATGTTC TCTTTACCTA AATACATTTA CCTTATTTTG TAGGTCACCA ATAAAGGTGG GAAACCATGT
CTATATACCT TGAAAGACTA GCCAAGCAAA GGAGAACAAA GGAAGCAATG AAGAGTGCAT CTGCTGCCAA CGCTCAGCGC
ACCTGCGTTA CCGCTCAGCG ACAACGGATC GGCTTCTTCC CTTTGAGCAC GTTTTAAATG TGTTTTGCCT GAAACATGCG
ACCCAGCCTA TGTAGCTTCT TTTGCATACC TCTCTGGTAG CTTCATGCAT GTTGTGAATG TATCAGTAGC TTGCTAGGCA
CGCTTCTCTT ACTCTATAAA AGAGAGGTTC TCCTTCTTGT AAATTGAA

>Vigan.03G201800.01
ATGGGAAGCG AAGATAATGT GAAGCATCTT GAAGACTGCT CCGTTTCTAA TGCATTAGGC ACTTGGGTGT TCTCAGTTGC
AGGAGCATTG TTGGCTATTC CAGTTGGCAT AAAGCGCAAA TCTCTAGCAC CCCTTGTATT TTTTGGCACC ACAGGTACTA
TGTTGGATAT TATTATGGGG ATCACTGCTT GCGAAAGGGA ACACGCAGAG CGCCAAATGA AGCTACTTGA AGCGCAAAAT
GCTGCTGCCG AAACTTCCTT GGGTGAAACA GAAATTGATT CATAA

>Vigan.03G201800.01
MGSEDNVKHL EDCSVSNALG TWVFSVAGAL LAIPVGIKRK SLAPLVFFGT TGTMLDIIMG ITACEREHAE RQMKLLEAQN
AAAETSLGET EIDS*