GBrowse Details

Vigan.03G035100.01

Basic Information:
Name: Vigan.03G035100.01
Multiple alignment
Variant Information
Position: Chr03:2708502..2714730 (+ strand)
Length: 6229
Functional Information:
Description: Similar to Uncharacterized protein. [I1M6W4, Glycine max]
GO: Biological Process: regulation of transcription, DNA-dependent (GO:0006355)
Cellular Component: nucleus (GO:0005634)
Molecular Function: DNA binding (GO:0003677)
Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700)
Molecular Function: protein dimerization activity (GO:0046983)
InterPro: Transcription factor, MADS-box (IPR002100)
Transcription factor, K-box (IPR002487)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.00,9.63,0.04,0.00,45.13,0.01,0.74
Automatic updates:
Name: BT093859 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-14E22 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:2708502..2709312 (+ strand)
Length: 811
Type: five_prime_UTR
Position: Chr03:2709313..2709542 (+ strand)
Length: 230
Type: CDS
Position: Chr03:2711516..2711597 (+ strand)
Length: 82
Type: CDS
Position: Chr03:2712339..2712400 (+ strand)
Length: 62
Type: CDS
Position: Chr03:2712481..2712580 (+ strand)
Length: 100
Type: CDS
Position: Chr03:2712753..2712794 (+ strand)
Length: 42
Type: CDS
Position: Chr03:2713082..2713123 (+ strand)
Length: 42
Type: CDS
Position: Chr03:2713221..2713384 (+ strand)
Length: 164
Type: CDS
Position: Chr03:2714559..2714562 (+ strand)
Length: 4
Type: CDS
Position: Chr03:2714563..2714730 (+ strand)
Length: 168
Type: three_prime_UTR

>Vigan.03G035100.01 class=Sequence position=Chr03:2708502..2714730 (+ strand)
TGAGAAAAGA GGTTTGAAGT AGAAGAGAAA GAGAGTGGAT TCTATGTGGA TAAAATGCCA AAACTCAAAA TCCAAGAAGC
AACCTGAAGC CATGCCTAAA AAATCAAAGG GTTGTAAGTT TTTGCGTGCA AACTTACGTT GACGTCCCTC TCATAGGCCA
TGAATAATGA AAGCCCACCT CATACAAAGT CACTTTCAAA AAGACACTTT CATTGTCCCC CTTCACCTTT TTCCCATACA
TACATCAACA GATATGAAAG CTTCATACAT TGAACATCAG ACTTAACAGC TGAATCCCAG GCCAAACCCT TCTCTTCTCA
ACCTCCTTTT TCTTTTATTC TCCAAACATC ACACATATCC CTTCACCAAA TTACTATTTT CAGTGCTCTC AATCAGTTCG
ACCCTCTATT TTCACTCCAT AAATACCTTT CTCCTAGGCC AACCCACTTC CATATTTTGC ATCCTTTTTC TCTTCACTCT
TCTACCATAA ATACTGCTCT TCTCATTGCA TAGGTACAAC ACCTACCTAT CATCTACTTA CAAGCACACC CTTTCTTTCT
CTCCATTCTG TCTTTCATTA TTATATAATA TGTTCGTCTT AGGGACAACA AGCTTAATAT CATAGTGTGT ATATATGTTC
AGTACAAATC ATCAAGCTTA ATGACCATTT CTTTCGAAGC TTCTTTGGTT ATCCTAAAAG ATTTCATCCA TTCTTGAAGT
GACCCAAAGG GAAAAATATC TACTTTTGGT GTTTTATGTT TTCTTTTCTG ACTATATTTT GTAGTGGGTA GGTTGTTGCA
GCGAGAGAGA TATGGAGTTT CCGAACGAAG CAATATCAGA AGGGTGTTCT CAGAAGAAAA GTGGAAGAGG GAAAATAGAG
ATCAAGCGGA TCGAGAACAC CACCAATCGG CAAGTTACCT TCTGCAAACG TCGCAACGGG TTGCTCAAGA AGGCTTATGA
ATTGTCTGTT CTCTGTGATG CCGAAGTTGC TCTTGTTGTC TTCTCAAGCC GTGGACGCCT TTATGAGTAT GCAAACAACA
GGTTCAAATT CTTTCAAACA TCTTCCTCTC TGTCACTCTC ATTTCATATA TCATAACAAT CTTCACACAA CTATTTTAAA
ACATTTTCTT TTCTTTTGTT TTCTAGTGTT ACACACACAC ACACACACAC ACACACATAT ATATATATAT ATATATATAT
ATATATATAT ATTCATTCCT TAAACAGGAG TCAGTATTTT CAGAAATTAC TCTCTAAGTC TTCCCTGAGA TATCTACCAT
TCTGTCTAGA TCTTGTACTC GTTGCTCTTT TTCCCTGTTT AGAAGGGTGC AGATCTGTTT AAGCAATAGA AATAGAGACA
TTAAAGTGAA ACTATATAAA GTAGCATATA TATTCATATA TATTTATATA TATATATATA TATATATATA TATATATATA
TATATCAGAA GAAGAGAAAG CTTTATTTAG GGTTACAAAG ATTTGCAGGC GAGGGATCTT AGCTTCCTTG TGTATGTTCT
GATTCAATGA CCATGCTGTG ATAAGCTTTA CCAATCTCTC TCTCTCTCTC TTTCATTATT TATCTCTCTT GATTTCTCTC
TCTACTTGTC AACCATCAAA TCTTAAAAGG GTCTTCTGCA CAAAGCTGTC ACGCACTCAA TGAAGCCTTC TTGTTTTTCT
TGCTGTCGTG TCTAACTTTG ACTCTTCCTT AATATCAGTA CTTGTTCTAC TTATTTGTCA ATGTATAGTG ATATAACACG
AGCACCTCAT CCAAATGGGA GCTAGGGTTT TCGACTTTTT CACTCTTTGG TCACACCTCA ATCACTTCAA TTCGTTTTCA
CGTATGAAAG AAGTTCGATT CTAATTACAT GATCGCATTA CATGGTTGTG CAAAAACTGC AAATCCAGGT TATCTTCCAA
CTAAATACCT TTTGGGGAGG AAAAGAGATC ACTTATTCGC ACGGTACATT TATATGTGAT ATCATTCATC TTGTGTTTTA
GCATCTCTTT TTTTCTTTAA CATCTTTGAT TGTATATCTT TTTATTTATA CAATTTCTTT TGGTAAATGC AGTTTCTCTT
TTGAACATAC CCTTTTTTAT TTCCATACAA TATCAAATAA GATATTAGGG TCTCCATTGG TTGTTATACG TACATTTTTA
GTGTATAACG TTTTTCAATA TCTTGAAAAG TCTGAATAAA GTTTTCATCA TGAATTGGTT GTCGACAAAG TAAATGAATT
TAAAGCAATA AGTATTTCTA GAGATTCGTG GAAGTCAGAA TTTGTTTCCC ATTTTAGTAA ATTTTGTCCT TTACATAAAT
AGAGGAAAGT ATTCTCTGGT TAGGGTTTTC CACCCCATAT GGTGGTATTA TCAATGTCCA TCAGCAAGAG TATTGTCTAC
GGTTTTCCAT CTTCATCTCC ATTGATCTTT TATTTTCATC CTTATCTGTA TTTCTAAAAG AATGTAGAAT CTTTGAAAGA
AGAACAAAAG GATTTAATGT GAAAGAGGTT ACATATCAGA GTGATTATAT ATTATTCTGA TTTCTTTACC CTAAATAGCT
AAAAGTAACG TTATGATAAC AGATTCTAAG AATGGCTAAA GGTTAATCAC TTCTCTCTTT CCCATTTATT TGTATTGCTT
TCATCTTTTT GTGGAATAAA GCTTAGCATT CCTCACGTCA ATTCTATACC CAACTCTTTC CATTATGAGT TTTGGACTCT
TCAATTAAAG GGAAAGGTAA ACTTTCACCT ACTGATGCAA CCATCTACCT CTTCCTGCAT ATTCCGCATT ATCTCTAACT
ATGGTTATAC AAGTTAACCA GTTTGTGTTT GAACTTTAGT GGGATATGTT ACACGTTTAA TGGGATATTA TAAGATTAAA
CCTTTTTCCA ATTCGAGATC AGAGCTCTTT GACCTAAAAG TTTAATGTCA ATAGAAGATG AGTTCATAAT TTATTTGTAA
AACACAGATA AATTAATCAA CTTTTTATGC TTCTGTTTGG TGTATTGTTT GCAGTGTTAG AGGAACTATC GATAGGTACA
AGAAAGCATG CGCTGCTTCC TCAAATGCAG AATCTGTCTC TGAAGCTAAT ACACAGGTAA ATTTCATTAG TGAACAAATC
AAAGAAAACT AAGAAAATGC TTTCTCTCTC TCTCTCTCTC TCTCTATATA TATATATATA TATATATATA TATATATATA
TATATAGTTA GGGTAATTTT TGGTTCAAAA ATTGTTTATT GTTTTAAAAT ATGGTAAGTT TTCTTTATAC AAAATATTTA
TAACTTTCTA TGGAGATTAG ATATTCTAAA ACTTAAATAT TAACCCTTTA TGTCAACAGT ATCTCGGATT ATATGATTAG
GAACTTGTTA GATCTATATA AATCTTAGGA TTTACAAAAA TTGATATATT TAATAAAGAG TAATTTAAAT AGTAAAAAAG
ATGACAAAAA GATACACGAT TGAATAAAAT GTACTACATA GTTTCTTAAA ACAAAAACCA ATTTAGAAAC AAAATAGACA
ATCTCAGTAT TTTCTTTTCT TTTCTTTCCT ACAAGACCTT CTGCTTCTAG CAACAAACAT GATTTGTGTT TGAATTTGGG
ATTTCTTTTT TGTGTGTGAA TAATGTAGTC TTTGGTAAAA AGAATCTGTT TGAGTTTGGT GACTTAATTC TCATCATCTT
GAGTGATAAA TTCACTGTGT TCTTTGTTTC TCTTAAGAAA ATTAACGATA TTAACTATTA AGTGTTCTGG TTAAATCTTC
TAAATTTTTT CTATCACCAT GTTGTTATAT ATATATTGTA ACCTCTTGAC AAACATTACA CTATATATGA ATATCAGTTT
TATCAGCAAG AATCATCCAA GTTAAAAAGA CAAATCAGAG ACATTCAGAA TCTAAACAGG TCAGCTTCTT CTCTTGAAAA
GTTTTCCAAC AAGTCTCTCG CGAAAAGATC ACCGGAATTT CTTGCTTAAT TAATTCCAGG CACATCCTTG GTGAAGCTCT
TAGTTCTCTA AGTCTGAAGG AATTAAAGAA TCTTGAGAGT AGATTGGAGA AAGGTTTGAG CAGAGTCAGA TCCAGAAAGG
TATTATAAGA GAATTAAGCC ACTAAACATA ATTAGTAAAA AACTATAGCA ACTTATAAAG ACAATTTAAG TTAGTATCTT
GAATAAAACT ATATATGCAT TATTTTTCTT CCAAGTTAGA ATTCTCTGTA TGTATATTCC TTTGAACTGA CATACACTCA
ACTTCTTTCA GCATGAGACA TTGTTTGCGG ATATCGAATT CATGCAAAAG CGGGTACGTA TACTCATCCT TCCTTCAATG
CATGCTATAT ATGAGTTTCT GCTTTGCTTG CTTCATTATT TAGACATATA CATATATATA GTATCTGAAG AAAATGAATA
TATACAACAA TATTGAACAT GATTGTGTAA CTCTAGTGAC AGGACCAAGA ATATGAAACT GAAGCCGAAT AATCCTGAAA
ACTAACTTAA AATTTGATAG ATTAATACAA ACTTTACCGA AATTATGTCT GATATTTGTA CATGGTCGAC CTCTTCTAAC
ATATGCATGA AAAAACGCAG GAAATAGAGC TGCAAAACCA CAATAATTTT CTGCGAGCTA AGGTCTCTCA TCATTCTCCA
AGACTTTTTC TCTTTGTATA TATAGATAGA TATAGATATA ATGTAACTAA GAATACATGG TTGGTGTGAT GATTGGTAGA
TAGCTGAACA CGATAGAGAA GAAGAACAAC AGCAACATAT GACAGGAAAT GTGTGCGAGT CCTTACCAGC TTCACAGTCA
TATGACAGGA ATTTCTTCCC TGTAAACCTC ATAGATTCCA GTCATCAATA CTCACGTCAA GACCACACTG CTCTTCAACT
TGTGTAAGCA CATTATTCGT CTTCATCACA AGTTAATTGT TTTTTAATGC ATTGATGCAT CCATGATGAA ATTTTTACAC
AGCAAGGTAA AGCAGCAATG AACATTTTGC CAATCTTTGT ATAAGCTTTT TAATTCATGT CATCCATACA CTCTATTATC
AGAAAAATAA ATCAGTAGTA AGTAATGTAT TGTAAAGTCT TGTGTGTTGT TTTCTTTTCT TTTTTTCAGT CCTTTTATAT
ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATGTTA TTATTATATT TAGATACCAC
TTAATAACCA ATATATTAAT ATTTTTTAAT TTTAATTTAA AGTTTAATAT ATATCATTAA AACTAGCTGT GAAGTGAATG
TTTTCAGTCT CAAAGTATAT ACTTTTGTTA TATTTACACA CTTATTTTAT CAAACAGCTC AATTATAATT TTACTTCAAT
TTTTTTCCTT TTCTTCTTTT CTTCTATTCC TCTCCTTTTT TTTCTCTTAA ATCCCAAATT TGAGGGGCCT CTTTAGATTT
TATTTTATTT TTTTATGACT TTAGGGTTTA TTTACATAAA TATTTATGAA TATAATGAAA TTAACATTTT CATAATATAT
AAGGCATAAA CTAATTTATA GAACTTTTCT TATATAATTT TTATAAATTC TTATTTTTGA ATTGATTATA AGAAATTCAT
TAAATAGAAT CTGAATTAGA AATAATGAAT ATTTAGTTGT TGAATAATTT AACTTGTAAA ATATTTTTTT AAATTAAGGA
TTGTTAGTTT TGAAATTATG TTTTATTTCC ATATATAACT GGTCATTAAA CCAGTCTCTA AAATTAATAG TCAAGTTAGT
GACTATTAAT TTTTTATAAA CATTTTTTCG CGTTATGTGT AAACTGATTT CGATCTATAG AAAAATATTA CATGTAATCT
CTCCTACAAA CCATATACAT ATCGATTTTT AGAAATGTGA TAAACTCACT TACACAAAAC TATAGTTTAT AAGTAAAATT
AATATTAATT TATATATTAT AATTTAATCT TATTTTTGTT ATTAAATTTG TATGTAATTG GTTTCCATGA ATCTGATTAT
AGAAGTTGTG CATTATTTTC TAACACTTTC TCCCTTGATT TTGACCTTTG GATGCAGCTG ATAACCCTAT TTAAAATTAT
GGCATAGCCT TTCTATGATT TGGAAGTGGT GTGGGATACA TATCCCTAAG TCTCCTGAAG GGTGCCCTTC GAATTTCCTC
TGCTAAACTT CTTCCCATGA AAACTTTAAG AAATTAAAGC AAGAATCAGC ATTTGTACTA ATACATCAT

>Vigan.03G035100.01
TGAGAAAAGA GGTTTGAAGT AGAAGAGAAA GAGAGTGGAT TCTATGTGGA TAAAATGCCA AAACTCAAAA TCCAAGAAGC
AACCTGAAGC CATGCCTAAA AAATCAAAGG GTTGTAAGTT TTTGCGTGCA AACTTACGTT GACGTCCCTC TCATAGGCCA
TGAATAATGA AAGCCCACCT CATACAAAGT CACTTTCAAA AAGACACTTT CATTGTCCCC CTTCACCTTT TTCCCATACA
TACATCAACA GATATGAAAG CTTCATACAT TGAACATCAG ACTTAACAGC TGAATCCCAG GCCAAACCCT TCTCTTCTCA
ACCTCCTTTT TCTTTTATTC TCCAAACATC ACACATATCC CTTCACCAAA TTACTATTTT CAGTGCTCTC AATCAGTTCG
ACCCTCTATT TTCACTCCAT AAATACCTTT CTCCTAGGCC AACCCACTTC CATATTTTGC ATCCTTTTTC TCTTCACTCT
TCTACCATAA ATACTGCTCT TCTCATTGCA TAGGTACAAC ACCTACCTAT CATCTACTTA CAAGCACACC CTTTCTTTCT
CTCCATTCTG TCTTTCATTA TTATATAATA TGTTCGTCTT AGGGACAACA AGCTTAATAT CATAGTGTGT ATATATGTTC
AGTACAAATC ATCAAGCTTA ATGACCATTT CTTTCGAAGC TTCTTTGGTT ATCCTAAAAG ATTTCATCCA TTCTTGAAGT
GACCCAAAGG GAAAAATATC TACTTTTGGT GTTTTATGTT TTCTTTTCTG ACTATATTTT GTAGTGGGTA GGTTGTTGCA
GCGAGAGAGA TATGGAGTTT CCGAACGAAG CAATATCAGA AGGGTGTTCT CAGAAGAAAA GTGGAAGAGG GAAAATAGAG
ATCAAGCGGA TCGAGAACAC CACCAATCGG CAAGTTACCT TCTGCAAACG TCGCAACGGG TTGCTCAAGA AGGCTTATGA
ATTGTCTGTT CTCTGTGATG CCGAAGTTGC TCTTGTTGTC TTCTCAAGCC GTGGACGCCT TTATGAGTAT GCAAACAACA
GTGTTAGAGG AACTATCGAT AGGTACAAGA AAGCATGCGC TGCTTCCTCA AATGCAGAAT CTGTCTCTGA AGCTAATACA
CAGTTTTATC AGCAAGAATC ATCCAAGTTA AAAAGACAAA TCAGAGACAT TCAGAATCTA AACAGGCACA TCCTTGGTGA
AGCTCTTAGT TCTCTAAGTC TGAAGGAATT AAAGAATCTT GAGAGTAGAT TGGAGAAAGG TTTGAGCAGA GTCAGATCCA
GAAAGCATGA GACATTGTTT GCGGATATCG AATTCATGCA AAAGCGGGAA ATAGAGCTGC AAAACCACAA TAATTTTCTG
CGAGCTAAGA TAGCTGAACA CGATAGAGAA GAAGAACAAC AGCAACATAT GACAGGAAAT GTGTGCGAGT CCTTACCAGC
TTCACAGTCA TATGACAGGA ATTTCTTCCC TGTAAACCTC ATAGATTCCA GTCATCAATA CTCACGTCAA GACCACACTG
CTCTTCAACT TGTCTGATAA CCCTATTTAA AATTATGGCA TAGCCTTTCT ATGATTTGGA AGTGGTGTGG GATACATATC
CCTAAGTCTC CTGAAGGGTG CCCTTCGAAT TTCCTCTGCT AAACTTCTTC CCATGAAAAC TTTAAGAAAT TAAAGCAAGA
ATCAGCATTT GTACTAATAC ATCAT

>Vigan.03G035100.01
ATGGAGTTTC CGAACGAAGC AATATCAGAA GGGTGTTCTC AGAAGAAAAG TGGAAGAGGG AAAATAGAGA TCAAGCGGAT
CGAGAACACC ACCAATCGGC AAGTTACCTT CTGCAAACGT CGCAACGGGT TGCTCAAGAA GGCTTATGAA TTGTCTGTTC
TCTGTGATGC CGAAGTTGCT CTTGTTGTCT TCTCAAGCCG TGGACGCCTT TATGAGTATG CAAACAACAG TGTTAGAGGA
ACTATCGATA GGTACAAGAA AGCATGCGCT GCTTCCTCAA ATGCAGAATC TGTCTCTGAA GCTAATACAC AGTTTTATCA
GCAAGAATCA TCCAAGTTAA AAAGACAAAT CAGAGACATT CAGAATCTAA ACAGGCACAT CCTTGGTGAA GCTCTTAGTT
CTCTAAGTCT GAAGGAATTA AAGAATCTTG AGAGTAGATT GGAGAAAGGT TTGAGCAGAG TCAGATCCAG AAAGCATGAG
ACATTGTTTG CGGATATCGA ATTCATGCAA AAGCGGGAAA TAGAGCTGCA AAACCACAAT AATTTTCTGC GAGCTAAGAT
AGCTGAACAC GATAGAGAAG AAGAACAACA GCAACATATG ACAGGAAATG TGTGCGAGTC CTTACCAGCT TCACAGTCAT
ATGACAGGAA TTTCTTCCCT GTAAACCTCA TAGATTCCAG TCATCAATAC TCACGTCAAG ACCACACTGC TCTTCAACTT
GTCTGA

>Vigan.03G035100.01
MEFPNEAISE GCSQKKSGRG KIEIKRIENT TNRQVTFCKR RNGLLKKAYE LSVLCDAEVA LVVFSSRGRL YEYANNSVRG
TIDRYKKACA ASSNAESVSE ANTQFYQQES SKLKRQIRDI QNLNRHILGE ALSSLSLKEL KNLESRLEKG LSRVRSRKHE
TLFADIEFMQ KREIELQNHN NFLRAKIAEH DREEEQQQHM TGNVCESLPA SQSYDRNFFP VNLIDSSHQY SRQDHTALQL
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