GBrowse Details

Vigan.02G320300.01

Basic Information:
Name: Vigan.02G320300.01
Multiple alignment
Variant Information
Position: Chr02:43805994..43810628 (+ strand)
Length: 4635
Functional Information:
Description: Similar to allantoate amidohydrolase. [A6YS26, Phaseolus vulgaris]
GO: Biological Process: proteolysis (GO:0006508)
Biological Process: metabolic process (GO:0008152)
Molecular Function: metallopeptidase activity (GO:0008237)
Molecular Function: hydrolase activity (GO:0016787)
Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines (GO:0016813)
InterPro: ArgE/DapE/ACY1/CPG2/YscS, conserved site (IPR001261)
Peptidase M20 (IPR002933)
Amidase, hydantoinase/carbamoylase (IPR010158)
Peptidase M20, dimerisation domain (IPR011650)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:155.21,148.02,36.32,95.82,6.04,33.39 ,14.14,47.80
Arabidopsis thaliana homolog: AT4G20070.1
Structure :
Position: Chr02:43805994..43806273 (+ strand)
Length: 280
Type: five_prime_UTR
Position: Chr02:43806274..43806370 (+ strand)
Length: 97
Type: CDS
Position: Chr02:43807282..43807373 (+ strand)
Length: 92
Type: CDS
Position: Chr02:43807630..43807733 (+ strand)
Length: 104
Type: CDS
Position: Chr02:43807805..43807889 (+ strand)
Length: 85
Type: CDS
Position: Chr02:43807977..43808093 (+ strand)
Length: 117
Type: CDS
Position: Chr02:43808281..43808390 (+ strand)
Length: 110
Type: CDS
Position: Chr02:43808469..43808574 (+ strand)
Length: 106
Type: CDS
Position: Chr02:43808680..43808766 (+ strand)
Length: 87
Type: CDS
Position: Chr02:43809287..43809529 (+ strand)
Length: 243
Type: CDS
Position: Chr02:43809651..43809776 (+ strand)
Length: 126
Type: CDS
Position: Chr02:43809866..43810027 (+ strand)
Length: 162
Type: CDS
Position: Chr02:43810111..43810233 (+ strand)
Length: 123
Type: CDS
Position: Chr02:43810234..43810628 (+ strand)
Length: 395
Type: three_prime_UTR

>Vigan.02G320300.01 class=Sequence position=Chr02:43805994..43810628 (+ strand)
TGACACTTGC ACTTACAGAG AGAGGAGCGA GAGAGGAGAG AGAAGAGAGG GGTCCCACCA CAATGGACAT CGCTCGTGCA
TGTCACGGGC TCGTTGGTGA GCCTTTGAGC CGCCAACACT TCCACCACAA ATTCATATTA TTCCCTGTGC TTCACTCGGT
CCTTGAGATT GGGAAGCATT GGTACCTAGC TAAGCTAAAG CTAAACCCTT CAGTTTTAGC TTAGCTTCTT GTGCTTTTGC
TTTCTCCATC CATAAACAAC CACCACCACC ACCCACCACC ATGTTTTCCA CCACCACCAC CACCACAACT TTTCTTCACT
CTTGCTTCCT TCTCTCCTGC CTCCTGTCAG CTCTTTCTTG TGTTTCCATG TTCTCTGGTA ATTGTTTTCT TCTCTTTTCA
GTTGGCTAAG AAAATAAAAA ACAAAGCTTG TTGTTTTTGT TATTGTTCTT GTGATATAGT TTGCATGAGG TGCAAAGACA
CGAGTCACCC TTTTAAGGAT TCAGATTCCG TTTCCATGAT GTTAGCACAA GATCTCTTTT TTTCTTTCTT TCTCTCAGAT
TTCGATGCAA CAGAGCCCAG AAAAGGCACA CTCAGCGTGG TGACGGTTGA GATTCTCCCG TTTCTGGCGT CACCTTGAAT
CTCTCTCAAC CAGCTTACGC AAAAAGGGAT CTTTTTTTTT TGATAAAATA TTCACGTGGG TCCTTGTATT GTGATTCTCC
CTTTGACCAT CTCTCTGGGT GTGCCTTTCT GGGCTTGTGT TGAGCCTGTG GATGAGTTGA CACCTGATTC ACATGGAGAT
GGCGTTTGTG TGAGGACCGA GTTGAGATAG ATCAGAAAAT TTGTGTTTTG TTTGGTTGTT ATAGTTGCGT GGTGCTAATG
GGTCAATTCA CGACTCTTGT TAGTTCACTG GAGATGCTTG TGTTGACGAG ATGATTTATA GTAACTTATT ATTCTGATTG
GGACATCTGA GTTCAAGTTG TGTCTGGAAT GGGTAGGGTG TTGGTAGGAG GGGTATGCTA CTCTTTTATG GGTCAGATTT
TGAAATTAAA AATTAGTCTG TGTAAAAGAG AAAGAGGGTG ATGCAAGTAT CTTGTTTTTT TTGGTGCCAA TTGGGATTTT
TTTTTTCTTC TTCTTCACAA TTTGTAGTGA GAAATTCTGT GTAACTGGCG CAATTTAATT TACAAAAATG AGTAAAGAAA
ACGGGAAGCA CAAGGTAGCT TTGTTTGTTC TTGTTGGTAG ATGTGATTGA TTGCGTGAAT GTTCTAAGTA CCTATTTGAA
ATGATTAGGT ATTGAGACAG GAGATTTAGA AAAAAGAGAT GATTTGTTTC CACAGATTCT AAGAGACGAG GCAGTGGCGA
GGCTTTATGA GCTTGGGAAG GTAACATATC TGAACTCAGC ATTACTTTGA TACTTTTTTC ATTTATATTT CTACTCATAC
ATGTATGAGT TTCTTTATTG ACCCCAATGA TCCAGATCCA TACAGGAAAA TGCAGATAAC TTCAATGTGT GTCAGCTTTA
AAGTATAGCA TTGAAAGAAA TGAGCAACAT TGTGTTACCT AAATTGCTTA TTGCATTACG TACACTTCAC TGCAAATTAT
TTATTCTTTG AATTTAATGT TGTTGTTGGA TTACAGGTGA GTGATGGTAA AAATTATTTG GAGAGGACAT TCTTGAGTCC
TGCATCCATG AGGGCAATTA GTCTTATTCG TAGATGGATG GAGGATGCTG GTTTGAGAAC GTTAGCCTTC TAACTTCTTC
AACCCTGAAT AGTCTTTCTG AAGACATGAC TGATGCTTTT ATTCTTTGCA GTTGGGTGGA CCAAATGGGA AATGTACACG
GTCGAGTCGA AGGTGCAAAT GCAAATGCTG AAGCTTTATT GATTGGTTCT CACATGGTGA GTCATTTGTT CCCTCAATTT
GTTTAAATAA AATTGAACCT TTCCTTGACA ATAGTGACGA TCCATTTGAA TGATGGATAT TAGGACACTG TTGTTGATGC
TGGGATGTTT GATGGATCCC TAGGAATAGT CTCTGCAATA TCTGCCTTGA AGGCCATGCA TGTCAATGGA AAGCTGGAAA
AGCTAAAGCG CCCCGTTGAG GTTAGTCAAC TAACTGATAT TAGTTTTCAG TAAAAGAGTA CTGGTTTGTG CTCACTGCTC
ATTAATTTAT TGTATCCTTT GGTAATAATG ATGTGCACCG AGAAAAAGAT AGTCAGAAAA TGTACATGGA AATGTTGGAA
CTATGCTACT GTTTTATTGA TGTCATCTTA TCTTTCTAAT GATTCAGGTG ATTGCATTTA GTGATGAAGA GGGTGTCAGA
TTTCAAACTA CTTTCTTGGG CAGTGGTGCT ATAGCTGGTA TCTTGCCTGC TACAACATTA GAGATATCTG ATAAGAGGTT
TCACCTTGCA ACTTCCTAGT TACATTTATA ATAAATTTTT CATCATCAGT ATATTTATTC ATATACCTCT TTCAGGGATG
TAATGATAAA AGATTTTCTT AAGGAGAACT CAATAGACAT TACAGAGGAA AGTCTTTTGA AGCTCAAGTA TGACCCAAAA
TCTGTTTGGG GTTATGTTGA GGTGTGACAA ACATTTTCAT TGTTCATCTA TTGAGCTATT TTTCTCAATA ATTTCACCAA
TAAGCTCATA AGAATTTGCT CGGTTGTTGT TTATTACATG TTGCAGGTTC ACATTGAGCA GGGTCCTGTG CTAGAACAAG
TTGGTTTCCC ACTTGGTGTG GTTAAAGGCA TAGCTGGGCA GACACGATTG AAGGTATGTT ACAACTTAGA TTTTCTGTCA
TGTGTTGTAA TGCTCATAGT TACTTGGATC AGTTGTGGTT GTTACTTCTA TGTGAACCCA ACAAGATATA ACTGATTATC
TAAGTTGTCT TTCAAACAAA GAAAACTTTA ATCTTTTAAT GCGTGTGAAA AATATGAGGT AAACTTGTCA ATGAAGAATT
TGGCTCATCT ACAGTAACTC AGGATAAAGT AAGCAGTCTT GGTTGCTGAT AAAAAAACCA ATGGTTGTTA TGCATGATAT
GCACAAGCAT AACAAATTCT GAATGTGTTG GAATATTAAC TATTGATATT CTTATCAGCA ACTAAGATTG TGCACTTTCA
ATATTGTAAG TTGGTGTATC TAAATAAACT TTCAATATCA ATGCTTGTGA AAGACATTTT TAAAAGCAGA TCTATCTGCA
CATTGATACT GTTAGTTTAC TTGTAGTTAT TGCTATACTT ATACGCCCAC GCCTATGTAT ATGTGGTTTA TAATTACATA
AACAACGATG CAGGTTACAG TTAGAGGATC ACAAGGTCAT GCTGGAACAG TCCCTATGTC CATGCGCCAG GATCCTATGG
CAGCTGCTGC GGAACAAATT GTGGTCTTGG AAAGCCTCTG TAAACATCCT GAAGAATACC TTTCTTATGA TGCTCATTGC
AGTGATTCAA CAGTGAAATC ACTGTCAAGC TCACTTGTCT GTACTGTTGG AGAGATATCA ACATGGCCAA GTGCCAGTAA
TGTCATTCCA GGCCAGGCAA GCCATGAATT TCTAAAATGC GCTGACCCTG GAATGTCAAA GTGGGCGTGC GTCATCATTT
CATATTTTTG TGGTTGAGGA GGCCCTTGAT GACAGTGAAT TTTTTGGATT GTTGTAGGTT ACATATACGG TTGACATACG
AGCAATTGAT GACCTTGGAC GTGAGGCTGT TATCTATGAT TTGTCAAAAC AAATTTACCA AATATGTGAC AAGCGTTCAG
TTTCCTGCAT TATTGAACAC AAGGTTTGGT TTGGTTGGCC TTCTTTTGTT TTTATCAGTT GTTTTCTGAA TTGTACTAAC
AACAATCAAT GACTTTGTTT TGTTCACTTC AGCATGATGC AGGTGCTGTG ATTTGTGATT CTGATCTGAG TTCTCAGCTC
AAGTCTGCAA CTTATTCTGC ACTAAAGAAG ATGGAGGGTG ACATTCAGGA CGAAGTGCCA ACATTAATGA GTGGAGCAGG
CCATGATGCA ATGGCAATAT CTCACTTAAC AAAGGTGACA CATTTTTGTT CCTTATCTGT GTGTTTTGAC ATGCAATTTA
CTCTACAGAA TCTGACAACG AATGAGGATT TGAACAGGTG GGAATGCTGT TTGTGCGATG TCGTGGAGGC ATCAGTCACT
CTCCACAAGA ACATGTGCTA GATAACGATG TCTGGGCAGC TGGTTTAGCA ACCTTGTCAT TTCTGGAAAA TCTATCATAA
GTGATATGAT AACTGTGTAA AGCAATAAAT AGATATTATA GCTTGTAATT ATAGGTTAAT TTATTGAGTT AATTCATGAG
TTAACTCTTT TTTCTTTAGT TGTTTGTGTC TTCTTATAGT TGTGTAATTG AATTTTTGGT TTTAGTTATC CTGTTATCAG
GAAACGGCTC AAGTTGTTCT GCATGTTCTT TGCCACTGTC GGATAAAGCT TATGACTGAT TTTACTTTTT ACTTTAATAG
GTATATATAA TGTTAGTGTA AATGTTTATG TATGGCTTGG GAAGTAGTTA TCATGAAAGT GTAAACCAAA GCTATCATAC
TCATACACAA GGAGTTGATG AAAGATGATA ATATCAAATA TTGGTGAATG CACGGATTAT TTGTTCCCAC ACAAA

>Vigan.02G320300.01
TGACACTTGC ACTTACAGAG AGAGGAGCGA GAGAGGAGAG AGAAGAGAGG GGTCCCACCA CAATGGACAT CGCTCGTGCA
TGTCACGGGC TCGTTGGTGA GCCTTTGAGC CGCCAACACT TCCACCACAA ATTCATATTA TTCCCTGTGC TTCACTCGGT
CCTTGAGATT GGGAAGCATT GGTACCTAGC TAAGCTAAAG CTAAACCCTT CAGTTTTAGC TTAGCTTCTT GTGCTTTTGC
TTTCTCCATC CATAAACAAC CACCACCACC ACCCACCACC ATGTTTTCCA CCACCACCAC CACCACAACT TTTCTTCACT
CTTGCTTCCT TCTCTCCTGC CTCCTGTCAG CTCTTTCTTG TGTTTCCATG TTCTCTGGTA TTGAGACAGG AGATTTAGAA
AAAAGAGATG ATTTGTTTCC ACAGATTCTA AGAGACGAGG CAGTGGCGAG GCTTTATGAG CTTGGGAAGG TGAGTGATGG
TAAAAATTAT TTGGAGAGGA CATTCTTGAG TCCTGCATCC ATGAGGGCAA TTAGTCTTAT TCGTAGATGG ATGGAGGATG
CTGGTTTGAG AACTTGGGTG GACCAAATGG GAAATGTACA CGGTCGAGTC GAAGGTGCAA ATGCAAATGC TGAAGCTTTA
TTGATTGGTT CTCACATGGA CACTGTTGTT GATGCTGGGA TGTTTGATGG ATCCCTAGGA ATAGTCTCTG CAATATCTGC
CTTGAAGGCC ATGCATGTCA ATGGAAAGCT GGAAAAGCTA AAGCGCCCCG TTGAGGTGAT TGCATTTAGT GATGAAGAGG
GTGTCAGATT TCAAACTACT TTCTTGGGCA GTGGTGCTAT AGCTGGTATC TTGCCTGCTA CAACATTAGA GATATCTGAT
AAGAGGGATG TAATGATAAA AGATTTTCTT AAGGAGAACT CAATAGACAT TACAGAGGAA AGTCTTTTGA AGCTCAAGTA
TGACCCAAAA TCTGTTTGGG GTTATGTTGA GGTTCACATT GAGCAGGGTC CTGTGCTAGA ACAAGTTGGT TTCCCACTTG
GTGTGGTTAA AGGCATAGCT GGGCAGACAC GATTGAAGGT TACAGTTAGA GGATCACAAG GTCATGCTGG AACAGTCCCT
ATGTCCATGC GCCAGGATCC TATGGCAGCT GCTGCGGAAC AAATTGTGGT CTTGGAAAGC CTCTGTAAAC ATCCTGAAGA
ATACCTTTCT TATGATGCTC ATTGCAGTGA TTCAACAGTG AAATCACTGT CAAGCTCACT TGTCTGTACT GTTGGAGAGA
TATCAACATG GCCAAGTGCC AGTAATGTCA TTCCAGGCCA GGTTACATAT ACGGTTGACA TACGAGCAAT TGATGACCTT
GGACGTGAGG CTGTTATCTA TGATTTGTCA AAACAAATTT ACCAAATATG TGACAAGCGT TCAGTTTCCT GCATTATTGA
ACACAAGCAT GATGCAGGTG CTGTGATTTG TGATTCTGAT CTGAGTTCTC AGCTCAAGTC TGCAACTTAT TCTGCACTAA
AGAAGATGGA GGGTGACATT CAGGACGAAG TGCCAACATT AATGAGTGGA GCAGGCCATG ATGCAATGGC AATATCTCAC
TTAACAAAGG TGGGAATGCT GTTTGTGCGA TGTCGTGGAG GCATCAGTCA CTCTCCACAA GAACATGTGC TAGATAACGA
TGTCTGGGCA GCTGGTTTAG CAACCTTGTC ATTTCTGGAA AATCTATCAT AAGTGATATG ATAACTGTGT AAAGCAATAA
ATAGATATTA TAGCTTGTAA TTATAGGTTA ATTTATTGAG TTAATTCATG AGTTAACTCT TTTTTCTTTA GTTGTTTGTG
TCTTCTTATA GTTGTGTAAT TGAATTTTTG GTTTTAGTTA TCCTGTTATC AGGAAACGGC TCAAGTTGTT CTGCATGTTC
TTTGCCACTG TCGGATAAAG CTTATGACTG ATTTTACTTT TTACTTTAAT AGGTATATAT AATGTTAGTG TAAATGTTTA
TGTATGGCTT GGGAAGTAGT TATCATGAAA GTGTAAACCA AAGCTATCAT ACTCATACAC AAGGAGTTGA TGAAAGATGA
TAATATCAAA TATTGGTGAA TGCACGGATT ATTTGTTCCC ACACAAA

>Vigan.02G320300.01
ATGTTTTCCA CCACCACCAC CACCACAACT TTTCTTCACT CTTGCTTCCT TCTCTCCTGC CTCCTGTCAG CTCTTTCTTG
TGTTTCCATG TTCTCTGGTA TTGAGACAGG AGATTTAGAA AAAAGAGATG ATTTGTTTCC ACAGATTCTA AGAGACGAGG
CAGTGGCGAG GCTTTATGAG CTTGGGAAGG TGAGTGATGG TAAAAATTAT TTGGAGAGGA CATTCTTGAG TCCTGCATCC
ATGAGGGCAA TTAGTCTTAT TCGTAGATGG ATGGAGGATG CTGGTTTGAG AACTTGGGTG GACCAAATGG GAAATGTACA
CGGTCGAGTC GAAGGTGCAA ATGCAAATGC TGAAGCTTTA TTGATTGGTT CTCACATGGA CACTGTTGTT GATGCTGGGA
TGTTTGATGG ATCCCTAGGA ATAGTCTCTG CAATATCTGC CTTGAAGGCC ATGCATGTCA ATGGAAAGCT GGAAAAGCTA
AAGCGCCCCG TTGAGGTGAT TGCATTTAGT GATGAAGAGG GTGTCAGATT TCAAACTACT TTCTTGGGCA GTGGTGCTAT
AGCTGGTATC TTGCCTGCTA CAACATTAGA GATATCTGAT AAGAGGGATG TAATGATAAA AGATTTTCTT AAGGAGAACT
CAATAGACAT TACAGAGGAA AGTCTTTTGA AGCTCAAGTA TGACCCAAAA TCTGTTTGGG GTTATGTTGA GGTTCACATT
GAGCAGGGTC CTGTGCTAGA ACAAGTTGGT TTCCCACTTG GTGTGGTTAA AGGCATAGCT GGGCAGACAC GATTGAAGGT
TACAGTTAGA GGATCACAAG GTCATGCTGG AACAGTCCCT ATGTCCATGC GCCAGGATCC TATGGCAGCT GCTGCGGAAC
AAATTGTGGT CTTGGAAAGC CTCTGTAAAC ATCCTGAAGA ATACCTTTCT TATGATGCTC ATTGCAGTGA TTCAACAGTG
AAATCACTGT CAAGCTCACT TGTCTGTACT GTTGGAGAGA TATCAACATG GCCAAGTGCC AGTAATGTCA TTCCAGGCCA
GGTTACATAT ACGGTTGACA TACGAGCAAT TGATGACCTT GGACGTGAGG CTGTTATCTA TGATTTGTCA AAACAAATTT
ACCAAATATG TGACAAGCGT TCAGTTTCCT GCATTATTGA ACACAAGCAT GATGCAGGTG CTGTGATTTG TGATTCTGAT
CTGAGTTCTC AGCTCAAGTC TGCAACTTAT TCTGCACTAA AGAAGATGGA GGGTGACATT CAGGACGAAG TGCCAACATT
AATGAGTGGA GCAGGCCATG ATGCAATGGC AATATCTCAC TTAACAAAGG TGGGAATGCT GTTTGTGCGA TGTCGTGGAG
GCATCAGTCA CTCTCCACAA GAACATGTGC TAGATAACGA TGTCTGGGCA GCTGGTTTAG CAACCTTGTC ATTTCTGGAA
AATCTATCAT AA

>Vigan.02G320300.01
MFSTTTTTTT FLHSCFLLSC LLSALSCVSM FSGIETGDLE KRDDLFPQIL RDEAVARLYE LGKVSDGKNY LERTFLSPAS
MRAISLIRRW MEDAGLRTWV DQMGNVHGRV EGANANAEAL LIGSHMDTVV DAGMFDGSLG IVSAISALKA MHVNGKLEKL
KRPVEVIAFS DEEGVRFQTT FLGSGAIAGI LPATTLEISD KRDVMIKDFL KENSIDITEE SLLKLKYDPK SVWGYVEVHI
EQGPVLEQVG FPLGVVKGIA GQTRLKVTVR GSQGHAGTVP MSMRQDPMAA AAEQIVVLES LCKHPEEYLS YDAHCSDSTV
KSLSSSLVCT VGEISTWPSA SNVIPGQVTY TVDIRAIDDL GREAVIYDLS KQIYQICDKR SVSCIIEHKH DAGAVICDSD
LSSQLKSATY SALKKMEGDI QDEVPTLMSG AGHDAMAISH LTKVGMLFVR CRGGISHSPQ EHVLDNDVWA AGLATLSFLE
NLS*