GBrowse Details

Vigan.02G283100.01

Basic Information:
Name: Vigan.02G283100.01
Multiple alignment
Variant Information
Position: Chr02:39331342..39335331 (+ strand)
Length: 3990
Functional Information:
Description: Similar to Uncharacterized protein. [I1MHZ0, Glycine max]
GO: Biological Process: metabolic process (GO:0008152)
Molecular Function: methyltransferase activity (GO:0008168)
InterPro: Methyltransferase type 11 (IPR013216)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:4.39,2.94,10.94,97.40,4.61,3.49,3.85 ,21.55
Arabidopsis thaliana homolog: AT2G41040.1
Automatic updates:
Name: NM_001255946 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100798970 (LOC100798970), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001255946 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (LOC100798970), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:39331342..39331498 (+ strand)
Length: 157
Type: five_prime_UTR
Position: Chr02:39331499..39331642 (+ strand)
Length: 144
Type: CDS
Position: Chr02:39331903..39332003 (+ strand)
Length: 101
Type: CDS
Position: Chr02:39332099..39332239 (+ strand)
Length: 141
Type: CDS
Position: Chr02:39332496..39332577 (+ strand)
Length: 82
Type: CDS
Position: Chr02:39332793..39332986 (+ strand)
Length: 194
Type: CDS
Position: Chr02:39333108..39333219 (+ strand)
Length: 112
Type: CDS
Position: Chr02:39334313..39334417 (+ strand)
Length: 105
Type: CDS
Position: Chr02:39334632..39334760 (+ strand)
Length: 129
Type: CDS
Position: Chr02:39334761..39335331 (+ strand)
Length: 571
Type: three_prime_UTR

>Vigan.02G283100.01 class=Sequence position=Chr02:39331342..39335331 (+ strand)
AAAAATGTAA CTTTCCCCTT GTATTTTTCT TTTTTTTCTG GTTTCGAATT TTATTATTTT TCTGGCTCGC AATTGAACAA
GTTGCTGGAA GAAGCTGAAC GAAAAAAAGA AGCAAAAGCT AGTGATTACC ACCCATTTTC TTCATTCTGC AAGAGTCATG
TCCGTCGCTA CTTCTCCTCT GCATCAAATA CAATTTCTCA AATGTCCTCG CTTTTCTTCC AAATCCCACT TTCGCCCTCG
TCGCTTCCAC TCCCTAACCC AGAGAACCAT TCCTGCAATC TCCGCAGTTG CAGCGGAAAC GGTATACTCG CTTTCCCTCT
GCCTTTCAAT CATGTTCGTT ATATACCTGT CATAATCCTT CATTTCATTT AGCTTATTGG TTATGATTGA TATTTTTCTT
AGAAACCCAA TTTAATAAAT ATATATGGTA TCATCATGGT TTAGCATTTC AATTTTTTTC TTCTGTGAGC TATTTGGAGT
TATTTTGTTC TGCTGGAACG ACTGTGTCAC ATGATTGTTT AATTCCCGTT GGAAGGATTT CTTTTTTTAT TTTTCCTTCA
GGAGTTGCAT ACACAGCAGG ATCAATCAGT TGAAGCAGAT GTGTTTGCTT GCCCAATATG TTATGAACCA TTGATAAGAA
AAGGCTCTCC TGGTCTGAAT TTGTAAGTTG GTTTATGCAT GGCGGCATGT GTATTTGGTT ATTACGTGTC TAAATTCCAG
GGTCGTAGTG ATTAACCAAA TGGTTTTTGA GCTTCAGATC AGCAATTTAT AGATCTGGTT TCATGTGTAA GATATGTAAG
AAGTCATACA CTAGCAAGGA CAGGTATCTG GATTTGACTG TGACTGCTGG ATTGAAAGAT TACACTGAAA TTCAACCAGC
TCGGACTGAG CTTTTCAGGT ATGATTGGTG ATATGACTCC AATTTATTGT CATTGCTACC ACTATTATCA TATGTTGCAC
ATACCTGTTT ATCAACAATA TCTTGTTATG TGTCTAATTT TCCATGTAAA TTTTTTAGAG GATACATGTT TTTTTTTCTT
TTTTCCATTT TTGTGAGTTA TTTTTACATG TGGCACTAGT TGTAGTCTAA TTCTGCATGC CACGATTGTT TGGGAAAGTT
CTTATGATTT CATTTGCGTT TAAACTGTTA TTAGGAGTCC CCTTGTTTCC TTCTTATATG AAAGAGGATG GCGTCAGAAT
TTCAGGCAAA GTGGCTTTCC TGGTCCTGAT GAAGAGGTAT GCATTCAATG AAACATGAAT TTCATTTTTC AAGTATTGAA
ACATTTTAAC TGCATGACAG GCGTTAAATA TATATATATG CACCAACACA CATACATGTA CATATATATC GCAACAGGGT
GAAGCTGAGA TTCTATATTG TTTTGTTCAT CTGGCTTACC TCATAGTAAT GCAATGCGTA TTGAGACTGT TACATATTCT
TTATGATGCA GTTCAAAATG GCTCAAGAGT ACTTTAAATC TGCTAGAGGT GGACTTCTTG TTGATGTTAG CTGTGGCAGT
GGTTTATTTT CCAGAAAATT CGTAAAATCT GGAACCTATT CCGGAGTCGT TGCACTAGAT TTCTCTGAAA ATATGCTTCG
TCAATGTTAT GATTTCATTA AGAAAGATGA CACACTTTCA ACCACGTATT CTTTTTCTCT TCATGTATTC TATTTTGAAT
TTAATGCAGC TAAAGAATCA AATGTTCATT GTTTTTCTAT TTGAGACCCA GATGCACTCA ATAGTGTTTC ATTTTGTTGT
TTGCAGTAAT ATTGCTCTCG TAAGGGCAGA TGTTTCTAGG CTTCCCTTCG CATCAGGTTC AGTTGATGCT GTTCATGCTG
GTGCAGCTTT GCATTGCTGG CCATCTCCCT CCAATGCTGT AAGTGCTGTG TCTTTATGTG ATGAACTGTT TGGGTTCGGG
TAACCTGTTC ATCAGACTGA TATCACTGTG TGTATGCGCA TGTCAATTAA AAGCACGAAC CAGTTCTCTA CCTAAAAAGA
CTGTCCTTTC ATTCACTCTT AAAATGCATG TCTTCTCTGC ATGCCTAAGT TCCATGTATA GTTTATTTTT GCTATTGTAA
GTACTTATTA CTTCTTACAT TCTGTTTTGC TGCATTTTTA CTTCATAATA TGTTCAACCT TTTGCATAAT TACCATGTGA
GCTTAAAACT GATATATTTT GCTGAGATTC TTATAATACA AATACATTTT TTAATTTGTT CTTCTGAGAA AATGTTTGCT
AAACAGAACA GTTATTGCTT CAATGTCATA AAATAACTAA AGTATTGCAT CATAAAGCTG GACTCTTTCC TCCAGAGATA
TAGAAAGAGA TTATAAAGAG GAACCTGACA GATATCAGAC AAAGCTGACA TAGATTTCCA CTTTATAAAA TTTTCCTGAA
TGAATAATTG AATCTAATTT TTGTATTGGA GCACAGATGG ATTAATGGTA GTTATTTTCT TTCTGATTTT ATTGGTCAAC
AATATATGTG CCTGTAATGT GCATAAGATG TATAAACACA TACATGATAA TTGTTCAAGT GCACACTGGT TGAAAACTAT
TTTGGAGAAC AGTAGCTTAT TTTTCTTAGG CTTTCTTTGC TAGCAAAAAT AAATTATTAT CTTTTTCAAA ATAAGCTGAA
TCAAACACAC TGACAGATCT TCTATTACTT GTACTGGATG TGAAGAGAAG AAACATGGAA AATTAGTTCC TGCAGCAGCC
TCAAAATGCC AATGCTGCAG TTGTCTGCAC TACTTAAAAT AACTTAGCCT AAATTTATCC TAAATTTTTA TGTTTACATT
TACCCTAATT TTAAACTAAA TAATCATGAA CCGCTCATTT CCTTATTGGA TTGCACATTT TTTGTAGTGT TGACTTTTAT
TCTATCCATA TATTTGCGTG TTGTTCCAAA TATTTGTTTA ACTCTACTTA AACATTTTAA TTTTTACGAT AACACTGTAA
ACTTTCTATA GGTTGCTGAA ATCACCCGGA TACTAAGAAG TGGTGGAGTT TTTGTTGGAA GCACTTTTCT GCGTTACAGT
TCATCAACTC CCTGGTTTAT ACGCCCTTTC AGAGAGGTAA ACTCAGGCCG TGATTATATT CAATTTCCTG TCATTATTAT
AATCTTAAGT GTCAACATTT TGCATGCTGA ATGTTCATTG TGCCTGTCTT TTAGTGTGAC GTAGAGTTCT TGATTATATC
TTAAATCCAT GAATGAAATA TCTGTTCCAC AATTTAACGA GTTTACCTTG AATCCCAACC AAGTTGATTT AAAGGTCTTT
TGGTTTGTAG AGGACTCCAC AAGGCTATGG CTATTTAACA GAGGAAGAGA TCAGAGACCT TTGCACTTCG TGTGGTCTTA
CTAATTACTC AAGCAAGACT CAGCAGGCTT TTATTATGTT TACAGCTCAG AAGCCATAAA AATAAGTTTG ATCTGTTTAC
AATAACATTT ATTAATTCCT TCTGTATTAA AGAAATTGTA AATAAACGAG AAATGAAAAG GTAAAAATCC GGGTCTGATG
TAAAGGCTCA CACGTTGTAA AATACTTCAT GCATGAATCC CCTGTATAAC TTTGAATTTT GACATTTTTT ACAGAGAATT
GAGTAAGCGC CAAAAGAGAA ATTTGATTAG CAAAGATCAT GTCAAGGATT CGGAGGAGAG TTATTGACAA GTAAAGCTAT
TACATGTGAC TTTGTGAATC TTAAGTGCTA TCTTGTGAAA TTAGAAACGA CCAATCAAGC AGTTCTGCTT TTATTTCATG
CTTCAAGTAC TTCTGCTAGA ACTTCAACCA ATCTAGCTTC AAAAAGATTC CATCTAAGTG GCTTTTTCGA AACAGAAAAT
TTTCCTGACA TTTTGGGAGC TGCAATAGTG CTATTATCAC CAAATCTTGT ATTGGTTGCC AAACACTGCA GTATGTCCTC
AGGGGTCGTT ACATTCAAAA TTTGAAACGA CATTTGATAT CATACTACGA CTACCCTTAA TAGAAAAACT 

>Vigan.02G283100.01
AAAAATGTAA CTTTCCCCTT GTATTTTTCT TTTTTTTCTG GTTTCGAATT TTATTATTTT TCTGGCTCGC AATTGAACAA
GTTGCTGGAA GAAGCTGAAC GAAAAAAAGA AGCAAAAGCT AGTGATTACC ACCCATTTTC TTCATTCTGC AAGAGTCATG
TCCGTCGCTA CTTCTCCTCT GCATCAAATA CAATTTCTCA AATGTCCTCG CTTTTCTTCC AAATCCCACT TTCGCCCTCG
TCGCTTCCAC TCCCTAACCC AGAGAACCAT TCCTGCAATC TCCGCAGTTG CAGCGGAAAC GGAGTTGCAT ACACAGCAGG
ATCAATCAGT TGAAGCAGAT GTGTTTGCTT GCCCAATATG TTATGAACCA TTGATAAGAA AAGGCTCTCC TGGTCTGAAT
TTATCAGCAA TTTATAGATC TGGTTTCATG TGTAAGATAT GTAAGAAGTC ATACACTAGC AAGGACAGGT ATCTGGATTT
GACTGTGACT GCTGGATTGA AAGATTACAC TGAAATTCAA CCAGCTCGGA CTGAGCTTTT CAGGAGTCCC CTTGTTTCCT
TCTTATATGA AAGAGGATGG CGTCAGAATT TCAGGCAAAG TGGCTTTCCT GGTCCTGATG AAGAGTTCAA AATGGCTCAA
GAGTACTTTA AATCTGCTAG AGGTGGACTT CTTGTTGATG TTAGCTGTGG CAGTGGTTTA TTTTCCAGAA AATTCGTAAA
ATCTGGAACC TATTCCGGAG TCGTTGCACT AGATTTCTCT GAAAATATGC TTCGTCAATG TTATGATTTC ATTAAGAAAG
ATGACACACT TTCAACCACT AATATTGCTC TCGTAAGGGC AGATGTTTCT AGGCTTCCCT TCGCATCAGG TTCAGTTGAT
GCTGTTCATG CTGGTGCAGC TTTGCATTGC TGGCCATCTC CCTCCAATGC TGTTGCTGAA ATCACCCGGA TACTAAGAAG
TGGTGGAGTT TTTGTTGGAA GCACTTTTCT GCGTTACAGT TCATCAACTC CCTGGTTTAT ACGCCCTTTC AGAGAGAGGA
CTCCACAAGG CTATGGCTAT TTAACAGAGG AAGAGATCAG AGACCTTTGC ACTTCGTGTG GTCTTACTAA TTACTCAAGC
AAGACTCAGC AGGCTTTTAT TATGTTTACA GCTCAGAAGC CATAAAAATA AGTTTGATCT GTTTACAATA ACATTTATTA
ATTCCTTCTG TATTAAAGAA ATTGTAAATA AACGAGAAAT GAAAAGGTAA AAATCCGGGT CTGATGTAAA GGCTCACACG
TTGTAAAATA CTTCATGCAT GAATCCCCTG TATAACTTTG AATTTTGACA TTTTTTACAG AGAATTGAGT AAGCGCCAAA
AGAGAAATTT GATTAGCAAA GATCATGTCA AGGATTCGGA GGAGAGTTAT TGACAAGTAA AGCTATTACA TGTGACTTTG
TGAATCTTAA GTGCTATCTT GTGAAATTAG AAACGACCAA TCAAGCAGTT CTGCTTTTAT TTCATGCTTC AAGTACTTCT
GCTAGAACTT CAACCAATCT AGCTTCAAAA AGATTCCATC TAAGTGGCTT TTTCGAAACA GAAAATTTTC CTGACATTTT
GGGAGCTGCA ATAGTGCTAT TATCACCAAA TCTTGTATTG GTTGCCAAAC ACTGCAGTAT GTCCTCAGGG GTCGTTACAT
TCAAAATTTG AAACGACATT TGATATCATA CTACGACTAC CCTTAATAGA AAAACT

>Vigan.02G283100.01
ATGTCCGTCG CTACTTCTCC TCTGCATCAA ATACAATTTC TCAAATGTCC TCGCTTTTCT TCCAAATCCC ACTTTCGCCC
TCGTCGCTTC CACTCCCTAA CCCAGAGAAC CATTCCTGCA ATCTCCGCAG TTGCAGCGGA AACGGAGTTG CATACACAGC
AGGATCAATC AGTTGAAGCA GATGTGTTTG CTTGCCCAAT ATGTTATGAA CCATTGATAA GAAAAGGCTC TCCTGGTCTG
AATTTATCAG CAATTTATAG ATCTGGTTTC ATGTGTAAGA TATGTAAGAA GTCATACACT AGCAAGGACA GGTATCTGGA
TTTGACTGTG ACTGCTGGAT TGAAAGATTA CACTGAAATT CAACCAGCTC GGACTGAGCT TTTCAGGAGT CCCCTTGTTT
CCTTCTTATA TGAAAGAGGA TGGCGTCAGA ATTTCAGGCA AAGTGGCTTT CCTGGTCCTG ATGAAGAGTT CAAAATGGCT
CAAGAGTACT TTAAATCTGC TAGAGGTGGA CTTCTTGTTG ATGTTAGCTG TGGCAGTGGT TTATTTTCCA GAAAATTCGT
AAAATCTGGA ACCTATTCCG GAGTCGTTGC ACTAGATTTC TCTGAAAATA TGCTTCGTCA ATGTTATGAT TTCATTAAGA
AAGATGACAC ACTTTCAACC ACTAATATTG CTCTCGTAAG GGCAGATGTT TCTAGGCTTC CCTTCGCATC AGGTTCAGTT
GATGCTGTTC ATGCTGGTGC AGCTTTGCAT TGCTGGCCAT CTCCCTCCAA TGCTGTTGCT GAAATCACCC GGATACTAAG
AAGTGGTGGA GTTTTTGTTG GAAGCACTTT TCTGCGTTAC AGTTCATCAA CTCCCTGGTT TATACGCCCT TTCAGAGAGA
GGACTCCACA AGGCTATGGC TATTTAACAG AGGAAGAGAT CAGAGACCTT TGCACTTCGT GTGGTCTTAC TAATTACTCA
AGCAAGACTC AGCAGGCTTT TATTATGTTT ACAGCTCAGA AGCCATAA

>Vigan.02G283100.01
MSVATSPLHQ IQFLKCPRFS SKSHFRPRRF HSLTQRTIPA ISAVAAETEL HTQQDQSVEA DVFACPICYE PLIRKGSPGL
NLSAIYRSGF MCKICKKSYT SKDRYLDLTV TAGLKDYTEI QPARTELFRS PLVSFLYERG WRQNFRQSGF PGPDEEFKMA
QEYFKSARGG LLVDVSCGSG LFSRKFVKSG TYSGVVALDF SENMLRQCYD FIKKDDTLST TNIALVRADV SRLPFASGSV
DAVHAGAALH CWPSPSNAVA EITRILRSGG VFVGSTFLRY SSSTPWFIRP FRERTPQGYG YLTEEEIRDL CTSCGLTNYS
SKTQQAFIMF TAQKP*