GBrowse Details

Vigan.02G243600.01

Basic Information:
Name: Vigan.02G243600.01
Multiple alignment
Variant Information
Position: Chr02:34167872..34170535 (- strand)
Length: 2664
Functional Information:
Description: Similar to Uncharacterized protein. [I1KCH6, Glycine max]
InterPro: DSS1/SEM1 (IPR007834)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:110.36,78.39,46.73,51.61,62.01,88.24 ,73.55,45.04
Automatic updates:
Name: BT145559 NCBI(nuccore)
Organism: Medicago truncatula
Description: Medicago truncatula clone JCVI-FLMt-21I23 unknown mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001364598 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100499672 (LOC100499672), mRNA.
PubMed ID: 20075913 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr02:34167872..34168305 (- strand)
Length: 434
Type: three_prime_UTR
Position: Chr02:34168306..34168436 (- strand)
Length: 131
Type: CDS
Position: Chr02:34170369..34170459 (- strand)
Length: 91
Type: CDS
Position: Chr02:34170460..34170535 (- strand)
Length: 76
Type: five_prime_UTR

>Vigan.02G243600.01 class=Sequence position=Chr02:34167872..34170535 (- strand)
GTTATTAGCG ACTGCTCTTT CTTCATCAAA TATACGCACT TAGGGTTTCG AAATAACTGC GGATTCAGGT TTATCAATGG
CAACAGAACC AAAAGCTGCC ACCGACGATG TCAAGATCGA TCTCTTCGAA GACGATGATG AATTCGAAGA GTTTGAAATC
GACGAAGGTA AATATCAGTA ATCTCATCCT TTCTTTCGAT TCCCGACTAA GTTCTCCTTG CCTCTGTTTC AATTTCCATT
TTTTTGTTTA TTCGTCCCAA TATTTGTAAC ACGTTTTGAA CTTTCACATC GATCTCAATT TGTTTTTCCA GTTCCTTGGC
CTCTTACAAA CCGAGTTTTT TTATTGGAAA AGTTGTTATT ATCCGATTTT GGCTTTAATT GTTGTTTCCT TTTTCTTCTC
TATTTATCTG CTGATATGTT CTTTTTGACT GTTAAAATTC TTTCAAACAA TATGTTTTTG TGTAAGATTG GAGACAGTCA
ACGGATAATA CAAACTATAT GTTTATAAAT GCCGAATTAC TGAACTCCAA CTCTAGGTGG TTTTATTTAT AGATGTTTAA
TGTATTGGTT ATTTGTTTCT GATCCTTAGA CACTTGAATT GAGATCATAA ACATAGTGGA CCTAATACCT GTTTTATGCA
GTAGTTAATA GTATTTCGTA CTGTGTTGAT CTTTACTGTA TTGCCGATGG GAGTAATCCT TTATAAGAGT AAATTGCATT
GTTCGATTCA TTGAAGAAAC ATATCTTTCT AGTGAAGCTT TTGTGTTGCC ATATCCTTGG TATTCCACAC GATTCTGGCT
TATTTCTTTA AATCCAGGGG AATATACCGA TTCACAAAAT CTGTCTCCTT TTTTTATGTA TTTGTTACGT GGGGTTTTAC
TGTCTTTCAG TTAGAAAACA ACGAAAAGTA GACCCAAAGA TCCTTCATCC TAACCTTGCC TTTCTCAGGT CTAACTGGAC
ATAATACACA GACAATCAAA GAGAATGCAC TTATTTAAGT GTCATAAATC TAGAAATTCA CATGAGGTAG GATTAGCCCA
TCTTCATTTG ATGGATCTCT GAGGAATAAC TAATTGAAGG ATATAATGCA CGTCAAGTAA ATGCCTGAAT TAATGACCAT
TTTGGTTTCC TTGAGCCTAG CAGAACTATA AGTATTCCAA GGTAGTCTAA ATTGTAAGAT ACATCTTAAG TAGTTGGAGT
TTGTTAAGAG TCCATGTAGG AAACCTCAAC AAAAACTCTG TTATGTAGGA TAGTGAAATC TGTTGCTTCA TTTTTTTTTT
GTCCATTCGA ACCCATCATA ATCTCTTCAC CCAACAAACT ACATTTCATC TTACCAGCAA TTAGAGCTGC CATCCTGACA
CCGTGTCCAC AAAGCCGTTG CATTTCTGCC GCAAAGCAAC ATTACCTTCA TTAAACCCAC ATCTTAAACC TACATGGCTT
ACCTTCCGAC AACAAAGCTC CCTCTTTGTC TTTTCCCATT CTCTGGTAGT AGTATTTGAT TTGCTTTTCT TGCCATTTCT
TCTCTAGGTA TTCAGGCAGT TTTTCTAGTA TATAGCAAAT ATGAGTTTAT TCAAGTAGCC ACTGCGTATT CGGCTGAATC
TTTCTATCAT TTAAAGATTT ATCTGCAATA CTTCACACAA AAAAACACTT AAAATTAGTT GATATTTATT CATTCTTGTC
TATAGGCTAT TAAACCTTTG CACTAAAAAT TCCTTTCCAT GTCGGAAATA ATAGTGCTCA GATTTGTATT AACAGAAGAA
ATGGGTGAGA GAGAAAGATG GACTCGATGA AAGGACTTTA TGTTTACAGC AGATTTTAGG GGCTCAACCC TAGAAGCCAC
CCAATTTATG TTCTGTTTTC TTTATAAAAT GTATAGAATA TGGACTATGA CTCATGGTAT TAGAGTCTAC GTTCCAAACA
TTGTTCGTCA ATGTAGTTGG TTCTGTTTCT CGTTTGTAAT AAACATTTGG TTCATTATTG TTGATGGTAT TTGAAAGTTC
TTTGGGTATA GAGAATGCTA ATTCAACACT TGTTTGGGGT TTGGGTGTCA TTCTAATGTT TCTTCTTTAT GTTGCACTTT
TTTGTTTTAC AACTTTCAGA GTGGGATGAC AAGGAGGAAG GGAAAGAAGT GTCTCAACAG TGGGAGGATG ATTGGGATGA
CGATGATGTT AGTGATGATT TTTCTCTTCA GTTAAGAAGG GAGTTGGAGA GTAATACTGA TAAGAATTAA ACCACGTGAG
ACTTGGGTGC TTGATCACTT GGAAGGAGAT CTATGCTTTG TTAGGAAGGA AATGTAAGAA CATACGGACA TAATTTTCTA
TTCTTTCCTG ACTATCTGCT TAGAAGTTAT TGAGTGTTTG TACATTAATC AAATTCTGCA TTATTAGGTG TAGTATGGCT
TTAAAAGTTG ACTTAAAACC TTGAATTTTT CGTTCTTATT TTCATTATGG GGTTGGGTAG GCGTGCTTTT TTATGTGAAC
CATTCTTGCT AATGGTGCAG TTAGTTGCAC ATTTTCTTGT AGCTCCCGTG TTCGAAGTAG GAACTAATCA ATGTAAAGCC
TGAAAACATA CACTAATCGA GGAAGCACTT TTCAGATAAC TTAATTACAT ACTTATCCGT TTTAGTTAAA AGAAAAATAT
AAAGAAAGGT ACAATTCAGT TCAA

>Vigan.02G243600.01
GTTATTAGCG ACTGCTCTTT CTTCATCAAA TATACGCACT TAGGGTTTCG AAATAACTGC GGATTCAGGT TTATCAATGG
CAACAGAACC AAAAGCTGCC ACCGACGATG TCAAGATCGA TCTCTTCGAA GACGATGATG AATTCGAAGA GTTTGAAATC
GACGAAGAGT GGGATGACAA GGAGGAAGGG AAAGAAGTGT CTCAACAGTG GGAGGATGAT TGGGATGACG ATGATGTTAG
TGATGATTTT TCTCTTCAGT TAAGAAGGGA GTTGGAGAGT AATACTGATA AGAATTAAAC CACGTGAGAC TTGGGTGCTT
GATCACTTGG AAGGAGATCT ATGCTTTGTT AGGAAGGAAA TGTAAGAACA TACGGACATA ATTTTCTATT CTTTCCTGAC
TATCTGCTTA GAAGTTATTG AGTGTTTGTA CATTAATCAA ATTCTGCATT ATTAGGTGTA GTATGGCTTT AAAAGTTGAC
TTAAAACCTT GAATTTTTCG TTCTTATTTT CATTATGGGG TTGGGTAGGC GTGCTTTTTT ATGTGAACCA TTCTTGCTAA
TGGTGCAGTT AGTTGCACAT TTTCTTGTAG CTCCCGTGTT CGAAGTAGGA ACTAATCAAT GTAAAGCCTG AAAACATACA
CTAATCGAGG AAGCACTTTT CAGATAACTT AATTACATAC TTATCCGTTT TAGTTAAAAG AAAAATATAA AGAAAGGTAC
AATTCAGTTC AA

>Vigan.02G243600.01
ATGGCAACAG AACCAAAAGC TGCCACCGAC GATGTCAAGA TCGATCTCTT CGAAGACGAT GATGAATTCG AAGAGTTTGA
AATCGACGAA GAGTGGGATG ACAAGGAGGA AGGGAAAGAA GTGTCTCAAC AGTGGGAGGA TGATTGGGAT GACGATGATG
TTAGTGATGA TTTTTCTCTT CAGTTAAGAA GGGAGTTGGA GAGTAATACT GATAAGAATT AA

>Vigan.02G243600.01
MATEPKAATD DVKIDLFEDD DEFEEFEIDE EWDDKEEGKE VSQQWEDDWD DDDVSDDFSL QLRRELESNT DKN*