GBrowse Details

Vigan.02G171300.01

Basic Information:
Name: Vigan.02G171300.01
Multiple alignment
Variant Information
Position: Chr02:17146152..17147131 (- strand)
Length: 980
Functional Information:
Description: Similar to Uncharacterized protein. [Q9FQE2, Glycine max]
GO: Molecular Function: protein binding (GO:0005515)
InterPro: Glutathione S-transferase, N-terminal (IPR004045)
Glutathione S-transferase, C-terminal (IPR004046)
Glutathione S-transferase, C-terminal-like (IPR010987)
Thioredoxin-like fold (IPR012336)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.07,0.04,3.14,23.58,5.12,4.59,8.94,2.85
Automatic updates:
Name: KM818463 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max tau class glutathione S-transferase (GSTU51) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:17146152..17146290 (- strand)
Length: 139
Type: three_prime_UTR
Position: Chr02:17146291..17146635 (- strand)
Length: 345
Type: CDS
Position: Chr02:17146722..17147039 (- strand)
Length: 318
Type: CDS
Position: Chr02:17147040..17147131 (- strand)
Length: 92
Type: five_prime_UTR

>Vigan.02G171300.01 class=Sequence position=Chr02:17146152..17147131 (- strand)
CGACTTGTTG ATAAATATCT CTTCTATTGG TCAAAAGATA ACCAAACTTT CAAACATTTG TTCAATTCAA TTCATAGTGC
AGTTGTTGGA AGATGGAGGA GGCCAAGGTG GTTTTGTTAG GCTCAAGGTT CAGTATGTTT GGGATGAGAG CTAAGATAGC
TTTGGCTGAG AAAGGAATAA AATATGAGTA CATGGAAGAA GATCTCACCA ACAAGAGCCC CTTGCTTCAA GAAATGAATC
CAATTTACAA GAAAATTCCA GTTCTCATAC ATCATGGAAG ACCAATCTGT GAGTCCCTCA TCATTGTTGA GTATATTGAC
ATGGTTTGGC ACAACAATTC TCCTTTGCTC CCCTTGGATC CCTACCACAA AGCACAAGCC AAGTTCTGGG CTGATTTTGT
AGATCAGAAG GTAAATTTCA AAATTAGAAG ATTAAGAACT AAGCATACAT GTTCTAGAAA GCTGTTGGTA ACAACTTATG
TGGTAAAAAA TGGCAGGTGT ATCATGCTTC TAAGAGAGTG TGGATTTCTA AGGGAGATGA GCAAGAGGTG GCAAAGAAGA
ACTTTCTAGA GAGCTTGAAG CATTTGGAGG AGTTTCTTGG AGACAAACCT TATTTTGGTG GAGAAACATT TGGGTTTGTT
GATGTTGCCC TCATTCCTTT CTATTGCTGG TTTTATACCT ATGAGACCTT TGGCAATTTC AAAGTGGAGG CAGTGTGTCC
AAAACTGATC TCCTGGGCTA AGAGATGCAT GCAAAAACAA AGTGTATTTG AAACTCTTGC AGATGAAAAG GAGGTCTATG
AGGCTGTTTT GGATTATAAG ACAAAATTTA TATTGAATTA AGGTAACTCT AGATGTTTAT TGAAGATGTA AGAATTTGCC
TGTATGAGAT ACACTTTTTT TTTGCTGTTG CAACAGATTC TGCTATTTGC TTCTGTTTTA GTTAGGCAAT CCTAATAATA
ATATATATGC ATGATTATTG 

>Vigan.02G171300.01
CGACTTGTTG ATAAATATCT CTTCTATTGG TCAAAAGATA ACCAAACTTT CAAACATTTG TTCAATTCAA TTCATAGTGC
AGTTGTTGGA AGATGGAGGA GGCCAAGGTG GTTTTGTTAG GCTCAAGGTT CAGTATGTTT GGGATGAGAG CTAAGATAGC
TTTGGCTGAG AAAGGAATAA AATATGAGTA CATGGAAGAA GATCTCACCA ACAAGAGCCC CTTGCTTCAA GAAATGAATC
CAATTTACAA GAAAATTCCA GTTCTCATAC ATCATGGAAG ACCAATCTGT GAGTCCCTCA TCATTGTTGA GTATATTGAC
ATGGTTTGGC ACAACAATTC TCCTTTGCTC CCCTTGGATC CCTACCACAA AGCACAAGCC AAGTTCTGGG CTGATTTTGT
AGATCAGAAG GTGTATCATG CTTCTAAGAG AGTGTGGATT TCTAAGGGAG ATGAGCAAGA GGTGGCAAAG AAGAACTTTC
TAGAGAGCTT GAAGCATTTG GAGGAGTTTC TTGGAGACAA ACCTTATTTT GGTGGAGAAA CATTTGGGTT TGTTGATGTT
GCCCTCATTC CTTTCTATTG CTGGTTTTAT ACCTATGAGA CCTTTGGCAA TTTCAAAGTG GAGGCAGTGT GTCCAAAACT
GATCTCCTGG GCTAAGAGAT GCATGCAAAA ACAAAGTGTA TTTGAAACTC TTGCAGATGA AAAGGAGGTC TATGAGGCTG
TTTTGGATTA TAAGACAAAA TTTATATTGA ATTAAGGTAA CTCTAGATGT TTATTGAAGA TGTAAGAATT TGCCTGTATG
AGATACACTT TTTTTTTGCT GTTGCAACAG ATTCTGCTAT TTGCTTCTGT TTTAGTTAGG CAATCCTAAT AATAATATAT
ATGCATGATT ATTG

>Vigan.02G171300.01
ATGGAGGAGG CCAAGGTGGT TTTGTTAGGC TCAAGGTTCA GTATGTTTGG GATGAGAGCT AAGATAGCTT TGGCTGAGAA
AGGAATAAAA TATGAGTACA TGGAAGAAGA TCTCACCAAC AAGAGCCCCT TGCTTCAAGA AATGAATCCA ATTTACAAGA
AAATTCCAGT TCTCATACAT CATGGAAGAC CAATCTGTGA GTCCCTCATC ATTGTTGAGT ATATTGACAT GGTTTGGCAC
AACAATTCTC CTTTGCTCCC CTTGGATCCC TACCACAAAG CACAAGCCAA GTTCTGGGCT GATTTTGTAG ATCAGAAGGT
GTATCATGCT TCTAAGAGAG TGTGGATTTC TAAGGGAGAT GAGCAAGAGG TGGCAAAGAA GAACTTTCTA GAGAGCTTGA
AGCATTTGGA GGAGTTTCTT GGAGACAAAC CTTATTTTGG TGGAGAAACA TTTGGGTTTG TTGATGTTGC CCTCATTCCT
TTCTATTGCT GGTTTTATAC CTATGAGACC TTTGGCAATT TCAAAGTGGA GGCAGTGTGT CCAAAACTGA TCTCCTGGGC
TAAGAGATGC ATGCAAAAAC AAAGTGTATT TGAAACTCTT GCAGATGAAA AGGAGGTCTA TGAGGCTGTT TTGGATTATA
AGACAAAATT TATATTGAAT TAA

>Vigan.02G171300.01
MEEAKVVLLG SRFSMFGMRA KIALAEKGIK YEYMEEDLTN KSPLLQEMNP IYKKIPVLIH HGRPICESLI IVEYIDMVWH
NNSPLLPLDP YHKAQAKFWA DFVDQKVYHA SKRVWISKGD EQEVAKKNFL ESLKHLEEFL GDKPYFGGET FGFVDVALIP
FYCWFYTYET FGNFKVEAVC PKLISWAKRC MQKQSVFETL ADEKEVYEAV LDYKTKFILN *