GBrowse Details

Vigan.02G161600.01

Basic Information:
Name: Vigan.02G161600.01
Multiple alignment
Variant Information
Position: Chr02:15584198..15586573 (- strand)
Length: 2376
Functional Information:
Description: Similar to Protein yippee-like. [V7AW60, Phaseolus vulgaris]
InterPro: Yippee/Mis18 (IPR004910)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:12.23,4.56,6.89,4.11,18.14,9.75,16.3 1,6.18
Arabidopsis thaliana homolog: AT4G27745.1
Automatic updates:
Name: NM_001250801 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527552 (LOC100527552), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:15584198..15584995 (- strand)
Length: 798
Type: three_prime_UTR
Position: Chr02:15584996..15585223 (- strand)
Length: 228
Type: CDS
Position: Chr02:15586141..15586233 (- strand)
Length: 93
Type: CDS
Position: Chr02:15586234..15586573 (- strand)
Length: 340
Type: five_prime_UTR

>Vigan.02G161600.01 class=Sequence position=Chr02:15584198..15586573 (- strand)
GTTTATTGGG TCTTTATCTG ATTACCATAT GTAATGCAAT TTATTTTATT TTATTTTGAA GAGGCTAATT GGGAATCTTC
ATTAACCTTT GTGATCAAGC CTACTCTTGC ACGCTAACTA ACGACATATT TTCTTCTTAT CTTATTGTTG CAGACTTTTG
GGTCATCATT GAGCTTGGTG TAGGTAAAGA AATTTCATCA CTTTTGTTCC TCTGCGCCCT TTTCTTCATC TCATTCATTT
ATAATCGAAA CCTTTGCTCT GTTACTCCCT TGGATCACCG GTGTTTGGTT CATTTGGAGC ACTGAGGTCT TTAATCTGAT
TTTTTTTTTT TAACCAATTC ATGGCGGAAC TAATAGGACC CCGCTTGTAT TGCTGCTCTA ATTGTAGAAA CCAGGTCTCA
CTCCACGATG ATATCATTTC CAAGGCTTTT CATGTAAACC TTTTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTGT
TTTACTTTTC TGGGTGATTT TGGGACCAAA AATGTGTATG GGGTACTTTC TTTTACATTT CAAGTGAAAA TTATATTTAT
TTTTTACAGT TGACTTCTTA GATGTATCGG TTTGTTGCCA ATTGAAATCA TCATCTACCT ATTTTACTTC AAAAGGGTAA
GGGCTTTGCT GAGTATTATT GTTTCTAGGT GTCATTACTA TTACAAAGGT AAAGTGGGGA AATTCCGGGG TGATTTCAAG
AAAGGAAAGA AATTTGAGCT CTTGTTTTGT AATTGAGGTT AAGTACAAAA CTGTCGTTCA ATCAACAATG AGACCAGTCT
CACTAGACTC ACTTATATAG CCAAATATGT ATATTTCTTA ATACTATTAG GACTACAATG AATTCAGGCC TTATAAATAC
TGAGAAGACA TGGTGTTTAC AATCAATTAG CTGTACATAC ACCAAGTGAC AGTAGTTATA GATGTCAGTT TGATGTGGCT
GTTGCTGTGA TTTTCAATAA ATGGGTTTTG GTTGAGTATG ACTTTGGTTG AAATTTGAAA ACATAATTTC AAATGTGGCC
GCGGGGAGAC AATGGCAGTG TTAAAGATGT GGAAAGTAGG TGATTTAGAT TTTCGACCTT TCATATCTTT GTCTCTGAGT
TTGTTATTGA CATAACAGTC AAACATCACA AAGATTGCCA ATATGTTGTG TTTTGTTCAT TCATTATTTG ACATATTTCC
TAGATGAAGA TATTCCCAAA GGCATCTTTG TATGTTCTCA TTTGGTTGTT CTCGGTATTT AGACATAGAT TTAAGGTTTA
TGATTTTATC TGGTACAAAA GCTTTCCGGT GTCATTTTTC TTAAATTGTC GTCCTAAATT TTATAATCAG GGAAGAAATG
GCCGAGCCTT TCTGTTTTCC CATGCAATGA ATGTTGTGAC GGGGCCAAAA GAAGACAGGC ATCTATTGAC TGGCCTCCAC
ACTGTTGCTG ATGTTTATTG TGGTGATTGC CGTGAAGTGT TGGGTTGGAA GTATGAAAGA GCTTATGAAG CGTCCCAGAG
GTACAAGGAA GGAAAGTTCA TACTTGAAAA GTCAAAAATT GTTAAGGACA ACTGGTAGCA TTACACCGTA ACCCCAATCC
ATTCATTCTG CTCTTCATGT TGCCTCTTTC ATGCTTTGTG GTGTAATCTT GTATAGGAGA ACCTTCAACC ATTTGAAAAT
TGTCATTGTT TCCCCACCTT TAATTTCCTC AGGTTATGGC CAGAAGTGAA ATTGGTATAT AAACTGTTTA TTCCTTGTTA
ATAGTATTGT GTATTCATTT CTGCTCTATG GATATCATGG CATGGTTACA GATTTCTTTT TGGGGAGTCG AACTTTGCTG
ACAGGCAAAG TTTATTACTC AGGTTATGGC TTGAATCTCT TGGATATAAA GTAATAGATC TTCTTATGGT TAAATTTGAT
ATTTGGTAAT AGCACAAATT GGCCAGCTTC AAAGTTTGGC TTTTTGGATG GTCCCTTTCC ACGATTGAAG TTGTAATTTT
TAAGTTCTGC TTCAAATTTT CAATTATTGT AAGCTGTTCG TACATAACAG AATATATGTT ATTCTGCTTC AATATTTCTC
ATCCATGCAT TCAGTTCTCT TGACCATTTA CAATGTTCCG AATTTTTTGT TTTTTTGAAA GGGTAAGGAT AAAGCTTTTA
TTAAGAATAT TAGTTTTTGC ACGACAGGTG CCAAAACAAA GTCAATAACA TCCAACATCA GAATAAACAA GGAGCGAAAA
AAGGGCACCA GTTCCTCCCT GCCTACGCAT CTTTACATTC ATTAGAAGCA TATCAACTAT TGAACACTTT CCTTTACTAG
TGTGTTACTC AAGGTATACA TTGAATATAA TTTTTGAAAA CAATAACTAA TTTCCG

>Vigan.02G161600.01
GTTTATTGGG TCTTTATCTG ATTACCATAT GTAATGCAAT TTATTTTATT TTATTTTGAA GAGGCTAATT GGGAATCTTC
ATTAACCTTT GTGATCAAGC CTACTCTTGC ACGCTAACTA ACGACATATT TTCTTCTTAT CTTATTGTTG CAGACTTTTG
GGTCATCATT GAGCTTGGTG TAGGTAAAGA AATTTCATCA CTTTTGTTCC TCTGCGCCCT TTTCTTCATC TCATTCATTT
ATAATCGAAA CCTTTGCTCT GTTACTCCCT TGGATCACCG GTGTTTGGTT CATTTGGAGC ACTGAGGTCT TTAATCTGAT
TTTTTTTTTT TAACCAATTC ATGGCGGAAC TAATAGGACC CCGCTTGTAT TGCTGCTCTA ATTGTAGAAA CCAGGTCTCA
CTCCACGATG ATATCATTTC CAAGGCTTTT CATGGAAGAA ATGGCCGAGC CTTTCTGTTT TCCCATGCAA TGAATGTTGT
GACGGGGCCA AAAGAAGACA GGCATCTATT GACTGGCCTC CACACTGTTG CTGATGTTTA TTGTGGTGAT TGCCGTGAAG
TGTTGGGTTG GAAGTATGAA AGAGCTTATG AAGCGTCCCA GAGGTACAAG GAAGGAAAGT TCATACTTGA AAAGTCAAAA
ATTGTTAAGG ACAACTGGTA GCATTACACC GTAACCCCAA TCCATTCATT CTGCTCTTCA TGTTGCCTCT TTCATGCTTT
GTGGTGTAAT CTTGTATAGG AGAACCTTCA ACCATTTGAA AATTGTCATT GTTTCCCCAC CTTTAATTTC CTCAGGTTAT
GGCCAGAAGT GAAATTGGTA TATAAACTGT TTATTCCTTG TTAATAGTAT TGTGTATTCA TTTCTGCTCT ATGGATATCA
TGGCATGGTT ACAGATTTCT TTTTGGGGAG TCGAACTTTG CTGACAGGCA AAGTTTATTA CTCAGGTTAT GGCTTGAATC
TCTTGGATAT AAAGTAATAG ATCTTCTTAT GGTTAAATTT GATATTTGGT AATAGCACAA ATTGGCCAGC TTCAAAGTTT
GGCTTTTTGG ATGGTCCCTT TCCACGATTG AAGTTGTAAT TTTTAAGTTC TGCTTCAAAT TTTCAATTAT TGTAAGCTGT
TCGTACATAA CAGAATATAT GTTATTCTGC TTCAATATTT CTCATCCATG CATTCAGTTC TCTTGACCAT TTACAATGTT
CCGAATTTTT TGTTTTTTTG AAAGGGTAAG GATAAAGCTT TTATTAAGAA TATTAGTTTT TGCACGACAG GTGCCAAAAC
AAAGTCAATA ACATCCAACA TCAGAATAAA CAAGGAGCGA AAAAAGGGCA CCAGTTCCTC CCTGCCTACG CATCTTTACA
TTCATTAGAA GCATATCAAC TATTGAACAC TTTCCTTTAC TAGTGTGTTA CTCAAGGTAT ACATTGAATA TAATTTTTGA
AAACAATAAC TAATTTCCG

>Vigan.02G161600.01
ATGGCGGAAC TAATAGGACC CCGCTTGTAT TGCTGCTCTA ATTGTAGAAA CCAGGTCTCA CTCCACGATG ATATCATTTC
CAAGGCTTTT CATGGAAGAA ATGGCCGAGC CTTTCTGTTT TCCCATGCAA TGAATGTTGT GACGGGGCCA AAAGAAGACA
GGCATCTATT GACTGGCCTC CACACTGTTG CTGATGTTTA TTGTGGTGAT TGCCGTGAAG TGTTGGGTTG GAAGTATGAA
AGAGCTTATG AAGCGTCCCA GAGGTACAAG GAAGGAAAGT TCATACTTGA AAAGTCAAAA ATTGTTAAGG ACAACTGGTA
G

>Vigan.02G161600.01
MAELIGPRLY CCSNCRNQVS LHDDIISKAF HGRNGRAFLF SHAMNVVTGP KEDRHLLTGL HTVADVYCGD CREVLGWKYE
RAYEASQRYK EGKFILEKSK IVKDNW*