GBrowse Details

Vigan.02G148500.01

Basic Information:
Name: Vigan.02G148500.01
Multiple alignment
Variant Information
Position: Chr02:13703960..13707034 (+ strand)
Length: 3075
Functional Information:
Description: Similar to Alcohol dehydrogenase-1F. [Q43016, Phaseolus acutifolius]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: zinc ion binding (GO:0008270)
Molecular Function: oxidoreductase activity (GO:0016491)
InterPro: Alcohol dehydrogenase superfamily, zinc-type (IPR002085)
Alcohol dehydrogenase, zinc-type, conserved site (IPR002328)
GroES (chaperonin 10)-like (IPR011032)
Alcohol dehydrogenase, C-terminal (IPR013149)
Alcohol dehydrogenase GroES-like (IPR013154)
NAD(P)-binding domain (IPR016040)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:131.63,46.68,50.60,6.92,758.25,155.91,395.14,60.09
Arabidopsis thaliana homolog: AT1G77120.1
Automatic updates:
Name: NM_001353241 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max alcohol dehydrogenase family protein (ADH2), mRNA.
PubMed ID: 21811849 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr02:13703960..13704219 (+ strand)
Length: 260
Type: five_prime_UTR
Position: Chr02:13704220..13704256 (+ strand)
Length: 37
Type: CDS
Position: Chr02:13704709..13704845 (+ strand)
Length: 137
Type: CDS
Position: Chr02:13705013..13705059 (+ strand)
Length: 47
Type: CDS
Position: Chr02:13705246..13705571 (+ strand)
Length: 326
Type: CDS
Position: Chr02:13705657..13705739 (+ strand)
Length: 83
Type: CDS
Position: Chr02:13705849..13705924 (+ strand)
Length: 76
Type: CDS
Position: Chr02:13706030..13706091 (+ strand)
Length: 62
Type: CDS
Position: Chr02:13706205..13706300 (+ strand)
Length: 96
Type: CDS
Position: Chr02:13706387..13706548 (+ strand)
Length: 162
Type: CDS
Position: Chr02:13706646..13706762 (+ strand)
Length: 117
Type: CDS
Position: Chr02:13706763..13707034 (+ strand)
Length: 272
Type: three_prime_UTR

>Vigan.02G148500.01 class=Sequence position=Chr02:13703960..13707034 (+ strand)
ATTAAAACTA AAACCAGGAG CTGTTTTGTT GTGTGGTAAT TGATACGTGG TACTGTGTCC GAATAATAAT CTAAGGCGCC
GCTTGGATAC TAAACAACAG CATAACCAGA GTGGTATTGT CCATTTATCA ACCTTCAATA TCACTCTCTC AGACTATATA
AATATATTCT GTACTCTCTT CTTCAAGGTC ACAGTCAATA CAAATTCATC AATTCTGCTT TCGTTCTTTC ATCTTTTCTT
CTCACCAACT ATCATTAGCC ATGCCGAGCA CAGCTGGTCA GGTCATCAAA TGCAAAGGTC ACTCATCCAC TCTTCTTCTC
ACTTTCATCT TGTTCTTTTC TGTGTTTCAG TTTTGGTGTC ATGCATAGCG TAGATTCTTC TCATCTTGTT TTGTTTCTTT
AAGAAAGTTT CTGTTTTTCA TATTTGTTAA CATCTTAGTT TTGCTGCATT CATGTTATGG CCACTTCGAA TTATACGAAA
AAACCTTAAT TCTTCACAAT TTTTTTTGTG GGTACTAAAA GTTGGGTCCT TTCTCAGCTT TGAATTATGG AAATTGAAAT
CTTGTTTACC AACCATTTCA AAGTGGTAAA TGGTATTATA GAAGTTTGTT TAACGGACGG GTCATCGTTA TTTAGCAATC
AACAAGGGCA CATTTGGTTT TCAAATTTTG TTGTGACTAT AAAAGGACTG TTTTGTTTGA ATTGAACGTA CTGATTAAAT
GGGTCTATTG AAATGCATGA ATGTGGCAGC CGCGGTAGCA TGGGAGGCAG GGAAGCCACT GGTGATTGAG GAAGTAGAGG
TGGCACCACC AGAGGCTGGT GAAGTGCGTT TGAAGATCCT CTACACCTCT CTTTGCCACA CTGATGTTTA CTTCTGGGAA
GCCAAGGTAA GACACCTTTT TACCTAACTT CCATTTTCCC TTATGATCCA CCAAACATAC TTGATCTGAT CTAAGAAAGG
CTAGGAAATA GATCAATTGA TTGATAGGTA CCAAGACATT CAATAAGGTT TCACAAATTT AACATGATTT CCTTTCTTAT
ATCTTCGTTT CAGGGCCAGA CTCCATTGTT TCCTCGCATA TTTGGTCATG AGGCTGGAGG GTATGTTTCT GTTCAGAACA
TTCCGCACAC AATCTCAAAT TATCAATCTT TGCTTATAAT TTGGGCTATT GATTCATTTT TGTGAAGTAT TTGGTCTCCA
CAGACTAATT GGGTCAAACA TTCTGTTTTT CTATTATGTG CATTAATGAA TGTTACCAAT AATGTTTACT TGATGCTGTT
ATTCAGGATT GTGGAGAGCG TAGGTGAGGG TGTGACTCAT CTGAAACCAG GGGACCATGC TCTTCCTGTG TTTACAGGGG
AGTGTGGGGA ATGTGCGCAT TGTAAGTCAG AGGAGAGCAA CATGTGTGAT CTGCTGAGGA TCAACACTGA TCGTGGTGTC
ATGATCCATG ATAGTCAAAC AAGATTTTCT ATAAAGGGAC AACCTATTTA CCATTTTGTC GGTACTTCTA CATTCAGTGA
ATACACTGTG GTTCATGCTG GATGTGTTGC CAAAGTCAAC CCTGCTGCCC CACTTGACAA AATTTGTGTT CTCAGTTGTG
GAATATGCAC AGGTTTGGAA AATCCCGGCC TTGACATAGT CTGTAACAAT AATGTTAGTG AACATCAAAT AAACGTCATT
CTCATCTGTG CTTGTAGGTC TTGGGGCTAC TGTCAATGTT GCAAAACCAA AACCTGGTTC TTCTGTTGCC ATTTTTGGAC
TTGGAGCTGT TGGCCTTGCC GTATGTTATT CTTGCCTTTG TGTGTGAGCA TTGTAGTTAT TATGCAAACG ATGAAAGAAC
GATGAAAGTA CAATATTAAT GTCTGCTCTT ATCTTTGATC ATATCAAAGG CTGCTGAAGG GGCAAGGATT TCCGGTGCAT
CAAGAATCAT TGGGGTTGAT TTAGTTTCAA GCCGATTTGA AGAAGGTACA GTGGTTTCTT CCTCCAATAA ATGAAGGAAT
TCGGCTAAAC ATACATTAAA TGGCTATTCA CTTGTTGATG GCTTCTCTCA TTTTTGTTCT TCTTTGGCAG CTAAGAAGTT
TGGGGTCAAT GAATTTGTGA ACCCAAAAGA CCATGACAAA CCCGTACAAC AGGTTAGTTT AGTTTCGTGG ACAAATTATA
TTTCTTGTCT CTTAAAGATG ATTTTTTTTT TCAAAATTGT TTTTATTTTG TTAATGTTGA TTGAGATGTG AATGTTGGCT
TCCAGGTAAT TGCTGAAATG ACAAATGGGG GAGTGGATCG TGCTGTTGAA TGTACTGGCA GCATCCAGGC CATGGTGTCA
GCATTCGAAT GTGTTCACGA TGTACATAAA TCATACCTTG CTTGCTCTAT TTAATGCTAA GAAATTTATG TGAAGCTTCT
AAGGCTGATC CTTGATTATT TCTTCAGGGT TGGGGTGTTG CTGTACTTGT TGGAGTGCCA AACAAAGATG ATGCATTCAA
AACTCATCCA GTGAATTTTT TGAACGAGAG GACTCTTAAG GGTACCTTTT ATGGTAACTA CAAACCTCGC ACTGATCTTC
CTTCAGTTGT GGAGAAGTAC ATGAATGGGG TAAGTATATA CACACACGTG TATATATATT GATTTTTGAG GTATATAAGA
TCATTCAAAT TGATGTCGTA TCTGATAATA TGGTCTTTAT CTCCAGGAAT TGGAACTGGA GAAATTCATC ACTCACACCG
TTCCATTCTC AGAAATTAAC AAAGCTTTTG ATTACATGCT GAAAGGGGAG TCCATCAGAT GCATTATCCG TATGGGAGAG
TAGAACTGTA AAATAAAGGA TGACATAGTT CCTGTGGAGG GACTTTGTTC TCTTTCTGGT TATCAAAAGA AGAAAATAAA
GATTATGTAT AATTAATCCC TTTTTGGATT ATTGAATCTG TGAGAATTTG TCTATGTTTG ATTGTAAAGA ACGATAGGAG
GCTTTGATGC TGTTATTGTC TATTTCATGA TAAATAAAAT GCCGTTTTGT GGATGAGTTG TTCTTAGAAA TAACTTTCAA
CTATGATATA TTTCAAAAAT AAATTACTTC GAGCT

>Vigan.02G148500.01
ATTAAAACTA AAACCAGGAG CTGTTTTGTT GTGTGGTAAT TGATACGTGG TACTGTGTCC GAATAATAAT CTAAGGCGCC
GCTTGGATAC TAAACAACAG CATAACCAGA GTGGTATTGT CCATTTATCA ACCTTCAATA TCACTCTCTC AGACTATATA
AATATATTCT GTACTCTCTT CTTCAAGGTC ACAGTCAATA CAAATTCATC AATTCTGCTT TCGTTCTTTC ATCTTTTCTT
CTCACCAACT ATCATTAGCC ATGCCGAGCA CAGCTGGTCA GGTCATCAAA TGCAAAGCCG CGGTAGCATG GGAGGCAGGG
AAGCCACTGG TGATTGAGGA AGTAGAGGTG GCACCACCAG AGGCTGGTGA AGTGCGTTTG AAGATCCTCT ACACCTCTCT
TTGCCACACT GATGTTTACT TCTGGGAAGC CAAGGGCCAG ACTCCATTGT TTCCTCGCAT ATTTGGTCAT GAGGCTGGAG
GGATTGTGGA GAGCGTAGGT GAGGGTGTGA CTCATCTGAA ACCAGGGGAC CATGCTCTTC CTGTGTTTAC AGGGGAGTGT
GGGGAATGTG CGCATTGTAA GTCAGAGGAG AGCAACATGT GTGATCTGCT GAGGATCAAC ACTGATCGTG GTGTCATGAT
CCATGATAGT CAAACAAGAT TTTCTATAAA GGGACAACCT ATTTACCATT TTGTCGGTAC TTCTACATTC AGTGAATACA
CTGTGGTTCA TGCTGGATGT GTTGCCAAAG TCAACCCTGC TGCCCCACTT GACAAAATTT GTGTTCTCAG TTGTGGAATA
TGCACAGGTC TTGGGGCTAC TGTCAATGTT GCAAAACCAA AACCTGGTTC TTCTGTTGCC ATTTTTGGAC TTGGAGCTGT
TGGCCTTGCC GCTGCTGAAG GGGCAAGGAT TTCCGGTGCA TCAAGAATCA TTGGGGTTGA TTTAGTTTCA AGCCGATTTG
AAGAAGCTAA GAAGTTTGGG GTCAATGAAT TTGTGAACCC AAAAGACCAT GACAAACCCG TACAACAGGT AATTGCTGAA
ATGACAAATG GGGGAGTGGA TCGTGCTGTT GAATGTACTG GCAGCATCCA GGCCATGGTG TCAGCATTCG AATGTGTTCA
CGATGGTTGG GGTGTTGCTG TACTTGTTGG AGTGCCAAAC AAAGATGATG CATTCAAAAC TCATCCAGTG AATTTTTTGA
ACGAGAGGAC TCTTAAGGGT ACCTTTTATG GTAACTACAA ACCTCGCACT GATCTTCCTT CAGTTGTGGA GAAGTACATG
AATGGGGAAT TGGAACTGGA GAAATTCATC ACTCACACCG TTCCATTCTC AGAAATTAAC AAAGCTTTTG ATTACATGCT
GAAAGGGGAG TCCATCAGAT GCATTATCCG TATGGGAGAG TAGAACTGTA AAATAAAGGA TGACATAGTT CCTGTGGAGG
GACTTTGTTC TCTTTCTGGT TATCAAAAGA AGAAAATAAA GATTATGTAT AATTAATCCC TTTTTGGATT ATTGAATCTG
TGAGAATTTG TCTATGTTTG ATTGTAAAGA ACGATAGGAG GCTTTGATGC TGTTATTGTC TATTTCATGA TAAATAAAAT
GCCGTTTTGT GGATGAGTTG TTCTTAGAAA TAACTTTCAA CTATGATATA TTTCAAAAAT AAATTACTTC GAGCT

>Vigan.02G148500.01
ATGCCGAGCA CAGCTGGTCA GGTCATCAAA TGCAAAGCCG CGGTAGCATG GGAGGCAGGG AAGCCACTGG TGATTGAGGA
AGTAGAGGTG GCACCACCAG AGGCTGGTGA AGTGCGTTTG AAGATCCTCT ACACCTCTCT TTGCCACACT GATGTTTACT
TCTGGGAAGC CAAGGGCCAG ACTCCATTGT TTCCTCGCAT ATTTGGTCAT GAGGCTGGAG GGATTGTGGA GAGCGTAGGT
GAGGGTGTGA CTCATCTGAA ACCAGGGGAC CATGCTCTTC CTGTGTTTAC AGGGGAGTGT GGGGAATGTG CGCATTGTAA
GTCAGAGGAG AGCAACATGT GTGATCTGCT GAGGATCAAC ACTGATCGTG GTGTCATGAT CCATGATAGT CAAACAAGAT
TTTCTATAAA GGGACAACCT ATTTACCATT TTGTCGGTAC TTCTACATTC AGTGAATACA CTGTGGTTCA TGCTGGATGT
GTTGCCAAAG TCAACCCTGC TGCCCCACTT GACAAAATTT GTGTTCTCAG TTGTGGAATA TGCACAGGTC TTGGGGCTAC
TGTCAATGTT GCAAAACCAA AACCTGGTTC TTCTGTTGCC ATTTTTGGAC TTGGAGCTGT TGGCCTTGCC GCTGCTGAAG
GGGCAAGGAT TTCCGGTGCA TCAAGAATCA TTGGGGTTGA TTTAGTTTCA AGCCGATTTG AAGAAGCTAA GAAGTTTGGG
GTCAATGAAT TTGTGAACCC AAAAGACCAT GACAAACCCG TACAACAGGT AATTGCTGAA ATGACAAATG GGGGAGTGGA
TCGTGCTGTT GAATGTACTG GCAGCATCCA GGCCATGGTG TCAGCATTCG AATGTGTTCA CGATGGTTGG GGTGTTGCTG
TACTTGTTGG AGTGCCAAAC AAAGATGATG CATTCAAAAC TCATCCAGTG AATTTTTTGA ACGAGAGGAC TCTTAAGGGT
ACCTTTTATG GTAACTACAA ACCTCGCACT GATCTTCCTT CAGTTGTGGA GAAGTACATG AATGGGGAAT TGGAACTGGA
GAAATTCATC ACTCACACCG TTCCATTCTC AGAAATTAAC AAAGCTTTTG ATTACATGCT GAAAGGGGAG TCCATCAGAT
GCATTATCCG TATGGGAGAG TAG

>Vigan.02G148500.01
MPSTAGQVIK CKAAVAWEAG KPLVIEEVEV APPEAGEVRL KILYTSLCHT DVYFWEAKGQ TPLFPRIFGH EAGGIVESVG
EGVTHLKPGD HALPVFTGEC GECAHCKSEE SNMCDLLRIN TDRGVMIHDS QTRFSIKGQP IYHFVGTSTF SEYTVVHAGC
VAKVNPAAPL DKICVLSCGI CTGLGATVNV AKPKPGSSVA IFGLGAVGLA AAEGARISGA SRIIGVDLVS SRFEEAKKFG
VNEFVNPKDH DKPVQQVIAE MTNGGVDRAV ECTGSIQAMV SAFECVHDGW GVAVLVGVPN KDDAFKTHPV NFLNERTLKG
TFYGNYKPRT DLPSVVEKYM NGELELEKFI THTVPFSEIN KAFDYMLKGE SIRCIIRMGE *