GBrowse Details

Vigan.02G147200.01

Basic Information:
Name: Vigan.02G147200.01
Multiple alignment
Variant Information
Position: Chr02:13533788..13536793 (+ strand)
Length: 3006
Functional Information:
Description: Similar to thioredoxin M-type, chloroplastic-like. [XP_004502573.1, Cicer arietinum]
GO: Biological Process: glycerol ether metabolic process (GO:0006662)
Biological Process: cell redox homeostasis (GO:0045454)
Molecular Function: protein disulfide oxidoreductase activity (GO:0015035)
InterPro: Thioredoxin (IPR005746)
Thioredoxin-like fold (IPR012336)
Thioredoxin domain (IPR013766)
Thioredoxin, conserved site (IPR017937)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:26.19,15.52,20.08,127.89,0.68,7.94,3 .63,11.15
Structure :
Position: Chr02:13533788..13534040 (+ strand)
Length: 253
Type: five_prime_UTR
Position: Chr02:13534041..13534254 (+ strand)
Length: 214
Type: CDS
Position: Chr02:13534800..13535119 (+ strand)
Length: 320
Type: CDS
Position: Chr02:13535120..13536793 (+ strand)
Length: 1674
Type: three_prime_UTR

>Vigan.02G147200.01 class=Sequence position=Chr02:13533788..13536793 (+ strand)
ACGCAGTCCT GAGTTTCTGG TTGTGATAAT TTTTTGGAGA ATTTGTAGGT TTTAGTGGGA GAAAAAGGTT TATTGAAAAC
AAAAATGACA TCCACATGAA TTTGAGCCTT CTTAGAACCT CACAATCTTG TAATAATATC CACATACGGA GATAGATAAG
ACATAATGAA ACCGAAAAGT CGAAAAGCTT ATCCAGAAGT TCAGGAGTGT ATTTTCTAAC AGAGCTTTAG AGAAAAGCAC
GTTGGTAGCT AGCATGGCTC TGGAGAAGTG TTTAGGAGTA ACCACAGTGC GCACAGCCAC ACCCCACCTT TCTCCGTGCT
TTCCAACTTC AAGGGAAAAG CTGCTTTTCC CAACTCACAC AGGTTTCAAG AAATCCATGC CAAACACAAA ACTCTCATAC
CAATCTCTCT ATTCAACCTA CCGAAAATCC CGTTTTGTTT GTAATGCTCG TGAAGCAGTA AATGAAGGTA AGTGATTATC
TCAGATGCAA GCTTTGAGCC TTTCTATTTA TTGAATTGCA CTGAGTAACC ATCTTTTTAC ATGCTTTTCC ATTTTAATTC
GTATTAGGAA TTTCAGCATG TGTTAAATTC GATAGTCTAC TTTCCAAAAG TACCTTAGAA GAGCTATGCT ATATCCACCT
ACAAGTGCGA ATTCTCCTAG CAGTACCTTG TTTTCAACGT TTTGAATATT TAAAATGCAT TCAATATTTT ATAACAAGGT
GTTAGAGGAA TTAGAATTAT TCTTTACTCA AACATTGACA TGATTTGAAA TATTTATTGT AGATTACAAT TTACTAGATA
TTATGAAATT TTGTGAGTGT CATTATCTTT TAATGAATCT CACTTATTGT TCTACAATTT CTAATTTTTA ATAAATTTTA
ATTGGAAAGA ATGTTAAAGA CTTATCTATG TTTTTATGGT TGGGTGAAAG CATTTAGGTG GAAATTCTAA TTAAGTGATT
CTCTTTGTGT TGTTTTGTAT GATGAAATAA TACATGTGCT CAAACTTGGC AGTGAAAGAG GTGACTGACT CAAGCTGGAA
CAAACTTGTG ATAGCCAATG AAACCCCTGT TCTGGTAGAA TTTTGGGCAC CGTGGTGTGG ACCATGCAGG ATGATAGCAC
CTGTTATCGA TGAGTTAGCG AAGCAATATG GTGACAAAAT TGCATGCTAC AAGCTTAACA CAGATGACTC CCCAAACATA
GCAACTCAGT ACGGCATCAG AAGCATACCA ACAGTTCTGT TCTTCAATAA TGGAGAGAAA AAAGAAAGCA TAATCGGTGC
AGTTCCCAAG TCTACTCTGT CGGCGACAAT TGAAAAATAT ATTGATTTAT AAGCTGGTAG TGCCAAATAA TGGCAAGCAT
TACAATGCCA AAAATGAAAG GACTGTAAAG GGAGAAGTGA TAATAGTCAC ATTGCAAATT TCATTCTCTT TCATTTTTTT
TCCATGCCCT ATAAGGCAAA AGATAGTGTC TGTTTATATG TTCAAGAACC ATCTTTTCAT CAGTGGCTTG ACACTTGGAA
GTAATACTTG TACTCCTTTT TTCATTTTGT AAAGGTTACA TTGGATAAAC AGACCTCATT CAACGTTTGA ATGTTGATTA
CTTCCCCGTG CTTAGGAACT TCAGATTGAT CATTGCTTGG AACAATAATT TACAATTCCC CCAACAACCA GCTGCTTTTT
GAATCCCAAA ACTTGTCACC TTCCTCAAGC GAGTGCGTAT ATCAAGGATG AGTTTGTGAA AAGCTCGCAA GAAATATTAA
TAAAAAAACG TTACACTTGA ATTCACAAGA AAAATGAGCC CCATCAGCCA CACAACCAGC CAACAAATTT TCATTTCTTA
TATATAAAAT CATATATTGG CACAGTGACC TACGCCCTAT CACTACCCAA CCCAAATACT CTGCCATCAT CGGGGGCCGA
TGGAAATACC ATTGCTCATG TTGCATGAGA AGCTTTTAAG AACCACAACA TCCATATCAT CCACAACGGC TCTCAAGGAG
AAGGTTTCCA ATCAAATTGA AGATTATTAA AACCATTTAC TGCCCCTAGC CCACTAAGTA GTTGGTTTGA CAAATCCTGT
TGATGATTCA TAGCTTGATC CCGAGCAAGA GATGCCATTC CTCCCCTTCC ATTCATGATT GAATTATTCA CCACAGCAGC
TCTCATTCCA TTAGGCATAG CGGATTGACC AAGACCAATT GTGCCGTAAT TACCAACCCC GACGCCTGAA TTACTGTTCA
TTGACCCATT ACCCATCAAG CCATTGCTAC CATTGAGCCC TGTATTGGCA CTCACTGGCA GAATACCATT TACATTTTTC
ACATCATTTC CAAGAGAACC AACACCGATC ATTCCTCCTG TGCCGTTAAT CTGAGAGGAC ATCATCATTT CATGTATGAT
TTTCTGGACT GAGCTTTGAG TATCACTAGG GTCAGGATCA CCAGAAATAG ATGGCTGCTG CTGTTGCATG GAAATATTAG
TTGCTGAGTT AGTTGTACTC ATGTGATTGC CCGATGTTAA AGTAGGGTGA GATGTTTGAG GGGGGTTGTT AGAAGATGGC
GTTGGTGATT GAAAAGGGGA TGAGTTTGGC TGGACCTGTG GCACTGTATT GGAGGAACCT GGGGATGGAA TCTGAACGGA
ACTACCTCCA TATGGACTAC TTGCATTGTT CATTGAATTT TGTTGTCTAG AATTCATTGA ATTCTGGTGG AGAAGTCCAA
CGATAGTACT TGTGGTGGTT GATGTGGATG CTGAGTTGAC ATTGTTATTC ACACTGACCA TACCATTGCT AGAAGCAATT
TGCATGGCAG CAGCTTGTAC TGAGTTTTGA TCACCATTTG AATTATGGGC CAACATTTGT TGCTGTTGCT GCTGCTGCTG
TAATTGTTCT TCATGCTGTT GTGCTTGACC ACGAGGTCCA GAAGAACCAT TTGTTCTCCG AGGGAATTTT GCCAAGCTAT
CTGAGAGATG GAAAAATAAT AGAAAGAAAG AAATTTTATT AACCTA

>Vigan.02G147200.01
ACGCAGTCCT GAGTTTCTGG TTGTGATAAT TTTTTGGAGA ATTTGTAGGT TTTAGTGGGA GAAAAAGGTT TATTGAAAAC
AAAAATGACA TCCACATGAA TTTGAGCCTT CTTAGAACCT CACAATCTTG TAATAATATC CACATACGGA GATAGATAAG
ACATAATGAA ACCGAAAAGT CGAAAAGCTT ATCCAGAAGT TCAGGAGTGT ATTTTCTAAC AGAGCTTTAG AGAAAAGCAC
GTTGGTAGCT AGCATGGCTC TGGAGAAGTG TTTAGGAGTA ACCACAGTGC GCACAGCCAC ACCCCACCTT TCTCCGTGCT
TTCCAACTTC AAGGGAAAAG CTGCTTTTCC CAACTCACAC AGGTTTCAAG AAATCCATGC CAAACACAAA ACTCTCATAC
CAATCTCTCT ATTCAACCTA CCGAAAATCC CGTTTTGTTT GTAATGCTCG TGAAGCAGTA AATGAAGTGA AAGAGGTGAC
TGACTCAAGC TGGAACAAAC TTGTGATAGC CAATGAAACC CCTGTTCTGG TAGAATTTTG GGCACCGTGG TGTGGACCAT
GCAGGATGAT AGCACCTGTT ATCGATGAGT TAGCGAAGCA ATATGGTGAC AAAATTGCAT GCTACAAGCT TAACACAGAT
GACTCCCCAA ACATAGCAAC TCAGTACGGC ATCAGAAGCA TACCAACAGT TCTGTTCTTC AATAATGGAG AGAAAAAAGA
AAGCATAATC GGTGCAGTTC CCAAGTCTAC TCTGTCGGCG ACAATTGAAA AATATATTGA TTTATAAGCT GGTAGTGCCA
AATAATGGCA AGCATTACAA TGCCAAAAAT GAAAGGACTG TAAAGGGAGA AGTGATAATA GTCACATTGC AAATTTCATT
CTCTTTCATT TTTTTTCCAT GCCCTATAAG GCAAAAGATA GTGTCTGTTT ATATGTTCAA GAACCATCTT TTCATCAGTG
GCTTGACACT TGGAAGTAAT ACTTGTACTC CTTTTTTCAT TTTGTAAAGG TTACATTGGA TAAACAGACC TCATTCAACG
TTTGAATGTT GATTACTTCC CCGTGCTTAG GAACTTCAGA TTGATCATTG CTTGGAACAA TAATTTACAA TTCCCCCAAC
AACCAGCTGC TTTTTGAATC CCAAAACTTG TCACCTTCCT CAAGCGAGTG CGTATATCAA GGATGAGTTT GTGAAAAGCT
CGCAAGAAAT ATTAATAAAA AAACGTTACA CTTGAATTCA CAAGAAAAAT GAGCCCCATC AGCCACACAA CCAGCCAACA
AATTTTCATT TCTTATATAT AAAATCATAT ATTGGCACAG TGACCTACGC CCTATCACTA CCCAACCCAA ATACTCTGCC
ATCATCGGGG GCCGATGGAA ATACCATTGC TCATGTTGCA TGAGAAGCTT TTAAGAACCA CAACATCCAT ATCATCCACA
ACGGCTCTCA AGGAGAAGGT TTCCAATCAA ATTGAAGATT ATTAAAACCA TTTACTGCCC CTAGCCCACT AAGTAGTTGG
TTTGACAAAT CCTGTTGATG ATTCATAGCT TGATCCCGAG CAAGAGATGC CATTCCTCCC CTTCCATTCA TGATTGAATT
ATTCACCACA GCAGCTCTCA TTCCATTAGG CATAGCGGAT TGACCAAGAC CAATTGTGCC GTAATTACCA ACCCCGACGC
CTGAATTACT GTTCATTGAC CCATTACCCA TCAAGCCATT GCTACCATTG AGCCCTGTAT TGGCACTCAC TGGCAGAATA
CCATTTACAT TTTTCACATC ATTTCCAAGA GAACCAACAC CGATCATTCC TCCTGTGCCG TTAATCTGAG AGGACATCAT
CATTTCATGT ATGATTTTCT GGACTGAGCT TTGAGTATCA CTAGGGTCAG GATCACCAGA AATAGATGGC TGCTGCTGTT
GCATGGAAAT ATTAGTTGCT GAGTTAGTTG TACTCATGTG ATTGCCCGAT GTTAAAGTAG GGTGAGATGT TTGAGGGGGG
TTGTTAGAAG ATGGCGTTGG TGATTGAAAA GGGGATGAGT TTGGCTGGAC CTGTGGCACT GTATTGGAGG AACCTGGGGA
TGGAATCTGA ACGGAACTAC CTCCATATGG ACTACTTGCA TTGTTCATTG AATTTTGTTG TCTAGAATTC ATTGAATTCT
GGTGGAGAAG TCCAACGATA GTACTTGTGG TGGTTGATGT GGATGCTGAG TTGACATTGT TATTCACACT GACCATACCA
TTGCTAGAAG CAATTTGCAT GGCAGCAGCT TGTACTGAGT TTTGATCACC ATTTGAATTA TGGGCCAACA TTTGTTGCTG
TTGCTGCTGC TGCTGTAATT GTTCTTCATG CTGTTGTGCT TGACCACGAG GTCCAGAAGA ACCATTTGTT CTCCGAGGGA
ATTTTGCCAA GCTATCTGAG AGATGGAAAA ATAATAGAAA GAAAGAAATT TTATTAACCT A

>Vigan.02G147200.01
ATGGCTCTGG AGAAGTGTTT AGGAGTAACC ACAGTGCGCA CAGCCACACC CCACCTTTCT CCGTGCTTTC CAACTTCAAG
GGAAAAGCTG CTTTTCCCAA CTCACACAGG TTTCAAGAAA TCCATGCCAA ACACAAAACT CTCATACCAA TCTCTCTATT
CAACCTACCG AAAATCCCGT TTTGTTTGTA ATGCTCGTGA AGCAGTAAAT GAAGTGAAAG AGGTGACTGA CTCAAGCTGG
AACAAACTTG TGATAGCCAA TGAAACCCCT GTTCTGGTAG AATTTTGGGC ACCGTGGTGT GGACCATGCA GGATGATAGC
ACCTGTTATC GATGAGTTAG CGAAGCAATA TGGTGACAAA ATTGCATGCT ACAAGCTTAA CACAGATGAC TCCCCAAACA
TAGCAACTCA GTACGGCATC AGAAGCATAC CAACAGTTCT GTTCTTCAAT AATGGAGAGA AAAAAGAAAG CATAATCGGT
GCAGTTCCCA AGTCTACTCT GTCGGCGACA ATTGAAAAAT ATATTGATTT ATAA

>Vigan.02G147200.01
MALEKCLGVT TVRTATPHLS PCFPTSREKL LFPTHTGFKK SMPNTKLSYQ SLYSTYRKSR FVCNAREAVN EVKEVTDSSW
NKLVIANETP VLVEFWAPWC GPCRMIAPVI DELAKQYGDK IACYKLNTDD SPNIATQYGI RSIPTVLFFN NGEKKESIIG
AVPKSTLSAT IEKYIDL*