GBrowse Details

Vigan.02G111700.01

Basic Information:
Name: Vigan.02G111700.01
Multiple alignment
Variant Information
Position: Chr02:9320856..9323708 (+ strand)
Length: 2853
Functional Information:
Description: Similar to Cyclin d2. [Q6T2Z7, Glycine max]
GO: Cellular Component: nucleus (GO:0005634)
InterPro: Cyclin, C-terminal domain (IPR004367)
Cyclin, N-terminal (IPR006671)
Cyclin-like (IPR013763)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1.14,2.10,4.16,4.11,4.07,8.88,3.88,4.75
Arabidopsis thaliana homolog: AT2G22490.2
Structure :
Position: Chr02:9320856..9321201 (+ strand)
Length: 346
Type: five_prime_UTR
Position: Chr02:9321202..9321492 (+ strand)
Length: 291
Type: CDS
Position: Chr02:9321882..9321968 (+ strand)
Length: 87
Type: CDS
Position: Chr02:9322066..9322164 (+ strand)
Length: 99
Type: CDS
Position: Chr02:9322269..9322470 (+ strand)
Length: 202
Type: CDS
Position: Chr02:9322606..9322730 (+ strand)
Length: 125
Type: CDS
Position: Chr02:9322938..9323177 (+ strand)
Length: 240
Type: CDS
Position: Chr02:9323178..9323708 (+ strand)
Length: 531
Type: three_prime_UTR

>Vigan.02G111700.01 class=Sequence position=Chr02:9320856..9323708 (+ strand)
TGGAGGACCC CTCTGTGCCA ACTCCACTCT CATCCTCTCT CTCTCTCTCT CTCTGCCTTT TACCCTAAAA AGGGGTGTTC
GTTTCCTTCA TAAGGCCCTC TCCTGCGGCA CTCTTTTCAG CTGAGTGTTG AGAGAGAGAG AGAGTGTGTG AGAGAGAGAG
AAACAAAGGA TTGTGTGGCT CTATAGTGCT TTTGTTGTTA TTTCCACAGA TTGTCATTTC TTTCTTTTAA CAATTTTCGT
AAAAGAAACT CAAAACACAC AGACCCCATC AATAATCTGA ACAAAAAGAT TGGTTCTTGT GAATTTGGAG CAAGAGTTCG
TTGGGTTTTG TTTTTGAGGT CTTGCAATGG CACCCAGTTT TGACTGTGTT TCGAGTCTCC TTTGCTCAGA GGACAGCACC
GTTTTCGACG AGAGTCATTA TGGGGGTACG ATGATGGGGG TGTGCGAGGA CACGTGGAGT TCCCGGAGGC ACCGCTTCGA
TGAACCGGAT GAGTTGCCAT TGCTGAGTGA TGAGTGCTTG GCGATGATGG TGGAAAGAGA GTGCCAACTC TGGCCTGGTT
TGCGTTACTT CAATAGGCTT CAGACTGGAA TTTTGGACTG TGGTGCCAGA AAGGAGGCCA TTGATTGGAT TCACAAGGTG
GGTTCAAGAC TTTTCCTTCT TCTTCTTTCT TTATCACTCA AAGCTCTGAT CTTTATTTCA CCATCCCGGT TTTGGTCTTT
TTCTTGTGAA AAATAGAAAC ATCTGCCGTT CTAATGTCCT GAAAAGAAAT CCGAACTTTC GGAAGCGTTT TGTTTGAATT
TCACATTTCA GTGATTGATC ATGAATTGAT GATTCCCTTG GCATCTTTTG TGCCTTAACT TGCATGTCCC GAAGCTGATT
GAATGGAAAT CTTTTATTGG ATGCGTTTCA AGATGTTTGA AACTGGGATC AGAACTTGGA TTTAGCTTGA ACTGATTATT
GTTTCTTGTT TACCCGATTG TCTTTTAGCA TGATCTAACT AGCAGACCTG TATTATTGTT TTATAGGTCC GATCGCATTT
CGGTTTTGGT CCTCTCTGTG GATATCTATC TATAAATTAC TTGGATCGAT TCCTTTCTGC ATATGAATTA CCAGTAAGTC
CTCGATTGAA AAGAAGATAA GCTTTTTATT ATTATTATTA TGTCATTGTA TTATCTTCTA GTTGTGATCT AATGCTTTTT
CCACTCACAG AAGGGAAGAG TTTGGACAAT GCAATTGTTG GCTGTGGCGT GTTTAACTCT TGCAGCCAAA GTGGATGAGA
CAGAAGTCCC AGTGTCTCTT GATTTACAGG TAGAAACTTT ATGTTTTATT TTATTTTCAA TGTTTGGTAC CTGAGACAAT
GCATTATTAG TGTTGCATGT GCTAAATGCT AATCCTGGTT GTCTTTGATT CAGGTGGGTG AATCAAAGTT TGTATTTGAG
GCTAAGACCA TCCAGAGAAT GGAGCTTCTA GTACTAAGCA CATTGAAGTG GAGAATGCAA GCAATCACTC CTTTCACCTT
CCTTGATTAC TTCCTTTGCA AGATCAATGG TGATCAGAGT CCATTGAAGT CTGCAATCAT GCGATCTATC CAACTAATAT
CAAGCACTGC AATAGGTAGC GATCTGTTTA CCCCCACACT TCATTGCACA ATTGGGTTGT TTTCTCAATG AGGCTCATCT
GTGCAGTGAA TAATAACTGT GAATGGGTGG AATTAGTGAT GGTAATTTGG ATGGTGTGGA TTCAATGCAG GAATTGACTT
CTTGGAATTC AAACCATCAG AGATTGCTGC AGCAGTGGCC ATGAATGTCA TGGGGGAAAC CCAAACAGTT GATACAGGGA
AAGCAATTTC TGTGCTGATT CAACACGTAG AAAAGGTAAG CATGGTGGTC CAAACCAAAC ATCATAGAAA AACTGAATAC
ACAACTATGA TGGTTTTACT TTGTTATCCT GAGATCTTTT TTGTTTATCA CACTTGCTGT AATCAATGAG ATTGAATTAA
GTTTAAAGTC TACTTTTGAA CACTGGTTGT TTACTCAGTT GATGCCAAGA ACATTGTGTG ATTTGGTTAT TTTTTTGGTC
AGGAGAGACT ATTGAAGTGC ATTAAAATGA TGCAAGAGTT GTCATCAAAC AGTGGGTGTG CGAAGGATTC AAGTGGTTCT
GTGACTTGCC TACCACAAAG CCCAATAGGT GTGCTAGATG CTTTGTGCTT CAGCCACAAA AGTGATGACA CAAATGCTGC
TTCATGTGCT AACTCTTCAC ATAGTACTCC TGATGCTAAA AGGAGGAAGT TAAACAAAAC CTGTGGAGCA GAGCTATTGT
AGGGATGTGG ACTGTGAAGT TTTCCATCAT CCATAGGATG CTTTTCCAAA AAATGGACAT TATGTGTGTT TTATGGAAGG
TGCCCCCATC AAAGCAATAC CAAAATGAGG CAGCAAGACA TAGCTACAAA TAAATTATTT TTTATTGTCC AAGAAAAAAA
AAAAAAAAAA AAAGAGACCC TGGTGTAAAA TAATACCAAA GCTATATAAG GTGAGGTGGG TCATGTGTGG AAGATGGGTG
ATCAAGTGAA CATTCTTATA CATTGCATGC TATTGGCATG AACTGAGTAA TCACCAGCTG TTAAAATATT TTAGATCTCT
TAACAGCAGC TAGGAAGCAG AATTAGAGTA TTGTATGTGT AAGTACAGTT GGGGGACTTT TTCATTTGTT CAATTGTTTT
TTTACTGTTA AACCGGAGAG AAAAAATAAA CCAAACTAAA AAAAAGAGAG TTATAATTTG CGGGAATATT TTATATTTTA
TCTATGATTA TTATTATCTT TATTCTATTT AATCAGTTTC TGATTGTTAT TTT

>Vigan.02G111700.01
TGGAGGACCC CTCTGTGCCA ACTCCACTCT CATCCTCTCT CTCTCTCTCT CTCTGCCTTT TACCCTAAAA AGGGGTGTTC
GTTTCCTTCA TAAGGCCCTC TCCTGCGGCA CTCTTTTCAG CTGAGTGTTG AGAGAGAGAG AGAGTGTGTG AGAGAGAGAG
AAACAAAGGA TTGTGTGGCT CTATAGTGCT TTTGTTGTTA TTTCCACAGA TTGTCATTTC TTTCTTTTAA CAATTTTCGT
AAAAGAAACT CAAAACACAC AGACCCCATC AATAATCTGA ACAAAAAGAT TGGTTCTTGT GAATTTGGAG CAAGAGTTCG
TTGGGTTTTG TTTTTGAGGT CTTGCAATGG CACCCAGTTT TGACTGTGTT TCGAGTCTCC TTTGCTCAGA GGACAGCACC
GTTTTCGACG AGAGTCATTA TGGGGGTACG ATGATGGGGG TGTGCGAGGA CACGTGGAGT TCCCGGAGGC ACCGCTTCGA
TGAACCGGAT GAGTTGCCAT TGCTGAGTGA TGAGTGCTTG GCGATGATGG TGGAAAGAGA GTGCCAACTC TGGCCTGGTT
TGCGTTACTT CAATAGGCTT CAGACTGGAA TTTTGGACTG TGGTGCCAGA AAGGAGGCCA TTGATTGGAT TCACAAGGTC
CGATCGCATT TCGGTTTTGG TCCTCTCTGT GGATATCTAT CTATAAATTA CTTGGATCGA TTCCTTTCTG CATATGAATT
ACCAAAGGGA AGAGTTTGGA CAATGCAATT GTTGGCTGTG GCGTGTTTAA CTCTTGCAGC CAAAGTGGAT GAGACAGAAG
TCCCAGTGTC TCTTGATTTA CAGGTGGGTG AATCAAAGTT TGTATTTGAG GCTAAGACCA TCCAGAGAAT GGAGCTTCTA
GTACTAAGCA CATTGAAGTG GAGAATGCAA GCAATCACTC CTTTCACCTT CCTTGATTAC TTCCTTTGCA AGATCAATGG
TGATCAGAGT CCATTGAAGT CTGCAATCAT GCGATCTATC CAACTAATAT CAAGCACTGC AATAGGAATT GACTTCTTGG
AATTCAAACC ATCAGAGATT GCTGCAGCAG TGGCCATGAA TGTCATGGGG GAAACCCAAA CAGTTGATAC AGGGAAAGCA
ATTTCTGTGC TGATTCAACA CGTAGAAAAG GAGAGACTAT TGAAGTGCAT TAAAATGATG CAAGAGTTGT CATCAAACAG
TGGGTGTGCG AAGGATTCAA GTGGTTCTGT GACTTGCCTA CCACAAAGCC CAATAGGTGT GCTAGATGCT TTGTGCTTCA
GCCACAAAAG TGATGACACA AATGCTGCTT CATGTGCTAA CTCTTCACAT AGTACTCCTG ATGCTAAAAG GAGGAAGTTA
AACAAAACCT GTGGAGCAGA GCTATTGTAG GGATGTGGAC TGTGAAGTTT TCCATCATCC ATAGGATGCT TTTCCAAAAA
ATGGACATTA TGTGTGTTTT ATGGAAGGTG CCCCCATCAA AGCAATACCA AAATGAGGCA GCAAGACATA GCTACAAATA
AATTATTTTT TATTGTCCAA GAAAAAAAAA AAAAAAAAAA AGAGACCCTG GTGTAAAATA ATACCAAAGC TATATAAGGT
GAGGTGGGTC ATGTGTGGAA GATGGGTGAT CAAGTGAACA TTCTTATACA TTGCATGCTA TTGGCATGAA CTGAGTAATC
ACCAGCTGTT AAAATATTTT AGATCTCTTA ACAGCAGCTA GGAAGCAGAA TTAGAGTATT GTATGTGTAA GTACAGTTGG
GGGACTTTTT CATTTGTTCA ATTGTTTTTT TACTGTTAAA CCGGAGAGAA AAAATAAACC AAACTAAAAA AAAGAGAGTT
ATAATTTGCG GGAATATTTT ATATTTTATC TATGATTATT ATTATCTTTA TTCTATTTAA TCAGTTTCTG ATTGTTATTT
T

>Vigan.02G111700.01
ATGGCACCCA GTTTTGACTG TGTTTCGAGT CTCCTTTGCT CAGAGGACAG CACCGTTTTC GACGAGAGTC ATTATGGGGG
TACGATGATG GGGGTGTGCG AGGACACGTG GAGTTCCCGG AGGCACCGCT TCGATGAACC GGATGAGTTG CCATTGCTGA
GTGATGAGTG CTTGGCGATG ATGGTGGAAA GAGAGTGCCA ACTCTGGCCT GGTTTGCGTT ACTTCAATAG GCTTCAGACT
GGAATTTTGG ACTGTGGTGC CAGAAAGGAG GCCATTGATT GGATTCACAA GGTCCGATCG CATTTCGGTT TTGGTCCTCT
CTGTGGATAT CTATCTATAA ATTACTTGGA TCGATTCCTT TCTGCATATG AATTACCAAA GGGAAGAGTT TGGACAATGC
AATTGTTGGC TGTGGCGTGT TTAACTCTTG CAGCCAAAGT GGATGAGACA GAAGTCCCAG TGTCTCTTGA TTTACAGGTG
GGTGAATCAA AGTTTGTATT TGAGGCTAAG ACCATCCAGA GAATGGAGCT TCTAGTACTA AGCACATTGA AGTGGAGAAT
GCAAGCAATC ACTCCTTTCA CCTTCCTTGA TTACTTCCTT TGCAAGATCA ATGGTGATCA GAGTCCATTG AAGTCTGCAA
TCATGCGATC TATCCAACTA ATATCAAGCA CTGCAATAGG AATTGACTTC TTGGAATTCA AACCATCAGA GATTGCTGCA
GCAGTGGCCA TGAATGTCAT GGGGGAAACC CAAACAGTTG ATACAGGGAA AGCAATTTCT GTGCTGATTC AACACGTAGA
AAAGGAGAGA CTATTGAAGT GCATTAAAAT GATGCAAGAG TTGTCATCAA ACAGTGGGTG TGCGAAGGAT TCAAGTGGTT
CTGTGACTTG CCTACCACAA AGCCCAATAG GTGTGCTAGA TGCTTTGTGC TTCAGCCACA AAAGTGATGA CACAAATGCT
GCTTCATGTG CTAACTCTTC ACATAGTACT CCTGATGCTA AAAGGAGGAA GTTAAACAAA ACCTGTGGAG CAGAGCTATT
GTAG

>Vigan.02G111700.01
MAPSFDCVSS LLCSEDSTVF DESHYGGTMM GVCEDTWSSR RHRFDEPDEL PLLSDECLAM MVERECQLWP GLRYFNRLQT
GILDCGARKE AIDWIHKVRS HFGFGPLCGY LSINYLDRFL SAYELPKGRV WTMQLLAVAC LTLAAKVDET EVPVSLDLQV
GESKFVFEAK TIQRMELLVL STLKWRMQAI TPFTFLDYFL CKINGDQSPL KSAIMRSIQL ISSTAIGIDF LEFKPSEIAA
AVAMNVMGET QTVDTGKAIS VLIQHVEKER LLKCIKMMQE LSSNSGCAKD SSGSVTCLPQ SPIGVLDALC FSHKSDDTNA
ASCANSSHST PDAKRRKLNK TCGAELL*