GBrowse Details

Vigan.02G028700.01

Basic Information:
Name: Vigan.02G028700.01
Multiple alignment
Variant Information
Position: Chr02:2123950..2126916 (- strand)
Length: 2967
Functional Information:
Description: Similar to Uncharacterized protein. [I1JT41, Glycine max]
InterPro: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG (IPR005269)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1.11,2.62,1.09,19.44,1.17,1.44,2.69,6.43
Automatic updates:
Name: BT098954 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-16D24 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:2123950..2124293 (- strand)
Length: 344
Type: three_prime_UTR
Position: Chr02:2124294..2124656 (- strand)
Length: 363
Type: CDS
Position: Chr02:2125080..2125150 (- strand)
Length: 71
Type: CDS
Position: Chr02:2125617..2125716 (- strand)
Length: 100
Type: CDS
Position: Chr02:2125794..2125824 (- strand)
Length: 31
Type: CDS
Position: Chr02:2125909..2126006 (- strand)
Length: 98
Type: CDS
Position: Chr02:2126098..2126223 (- strand)
Length: 126
Type: CDS
Position: Chr02:2126224..2126916 (- strand)
Length: 693
Type: five_prime_UTR

>Vigan.02G028700.01 class=Sequence position=Chr02:2123950..2126916 (- strand)
GGTTTGATAT AGTACGAATA TATGAGAACC GCAAAGAAAC TCCAATAGCT TGATATCATG AGGTTTTTTC TAGGTACATA
ACGAAAAAAA AAACACATTA CAGCCTTAAC ATGATTTCTG TTCACAAACC AACTGCTAAC TGGGATTTCT TTTTGTTTGC
ATCAAAGATA TTATAACATT TAATTAAGAA TATTAATATG AGAAAAGTGT CGTACGTGTG ACGTACCGAC ATTGTACATT
TGTTTAAGGG TGTTAAAATG TTTTAGGAAA TTAGAAAGGA ATTATGAAAT TTGATATATA ACTGTAGAAG AAATGTATAA
TGGACGGAAT TTGGAAAAGG AATATACGGA GAACTAGAAA AGGAAAAAGG ATAGAGGAGT GAGTGTCAAT CAGATTCAAG
GAAGAATATG TCTGGAGACG AGATGAGAGA TGAGAGATGA GATGATGTGA GATGTGATGG AGAAATTGAT ATGATATGGT
GAATATTATC ATGTCATGTG TGGGTAGCAT GGCACTCTCA TTCTCATATT TATTTATGAG ACAGAGTGAC TATAAAGAGA
AGCAATGACA CCAATTCTCA TTCCCCCTCA CTTTTGGCTT CTCAGTGATT GCTGACTCCT TTTTTTTCTT TACTTTCCTT
TTTCTGCCAA ATATTATTAT TCTCTGTTCT CCTTCACTTC ACTTGCTCTA TTCATGGAAG CCCAACCGCA ACAATCACCC
TGCAAGTCTA GGTTCAGACG CATCTGTGTT TACTGCGGTA GCAGCCCTGG CAAAAGCCCC AGCTACCAGC TCGCTGCTGT
TCAACTCGGA AAACAACTGG CAAGTATATC TTAATCACAA ACCCAAACAC AACCTTAATT TTTACAAGAA ACACAAAAAT
ATTCAGACTT TTGTTCTGAA TGTTGTGTAG GTGGAGAGGA AGATTGACTT GGTGTATGGA GGAGGAAGCA TAGGCTTGAT
GGGTCTAATC TCACAAGTTG TATACGATGG TGGACGCCAC GTGTTAGGGT AACTCACCGC TCCCTTCTTC TTCTTCTGTC
TCTTTCTTCC TCTATTTTTT TAATATGCTA ATCAATCTTC TCGCTGCTAC AGGGTCATTC CAAACACGCT TAATGCAAGA
GAGGTACACT ATACTATCTA ATAAAACTTG CATATTTTTC TTTTCTCAAT TCCTTCAAAA ACTAATAATA ATGTCTTCAG
ATCACCGGCG AGAGTGTTGG AGAAGTCAGA GCTGTATCGG GCATGCACCA ACGCAAAGCA GAGATGGCCC GACAGGCCGA
TGCATTCATT GCACTGCCAG GTTTATCTTC TTCTCCTTCT TCTTCTTTCT CCATCATATT CATATTCTCC TCTTTCTCTT
TTTTTTTTTC AAAATTCTCT TCTCCATATA TACCTATATA TATTATTATT ATTGTTCTTA TTATTGCTTT TCAAACCGTA
ACATTCTTAA CCTCAAATTA TTTCACCCCT TGCAATGATT TTTATTCCCA TCTATGTTTT ATTTTATATT AATTAAAGCA
ATTTTTTTAA TGTTTGTTTG TGAAAAAGAA GGGTTTGTAT ATGTATAAAT AATAAATACG CCCATCTTAA TTTCTCATCC
TTCGCCGTTG ACATTCTTTG CGAAATCGAA ATCGGTTTCC AAGATAACTG TTTCTGTAAC TGTCAACCGT ATGGGTTGTA
TAATCTCAAT GGTTGTGGCG GTGATTCCTA TGAAATTCCT GGTATTGGCA GTAATAATAA TTCCTTGCAA ATTTATATTC
CGACAGGTGG ATATGGCACC CTTGAAGAAC TACTGGAAAT CATCACCTGG GCTCAGTTAG GTATCCACGA TAAACCGGTA
AGATTTCCGA AATTAACCAA AAAAAAAGTT CTTTTTTTTA AGTCTTTTAT CTAAGAAAAC AGAATTAAAA CGTTTTTTTT
TTAGTTTGTA CAAATAAGCC TTTTTTTCTT CTCGTGATAG AGTGGAGAAT TTTATTTTTT TTGGCTGCTC ACGTCACTTA
ATACATCAGG AAATTTATTT AGCGAAATGA AGCGCGTATT AACTAGTAAT AAAAGGCATT ATTTGGGGAA GTCAAAGAAA
AAGACAGAAT GATGGTGTTT ACTGTTCAAA CAAGAGAAGT AGTTAATTGA TGATTATTTT TGGAAGGTGA AACAATGTTA
AAAGAGAAAA AATAAATAAA TAAAAATAAA GATTGATTAA GTAATAGATT AATTTAATAA TGAAAAGGGA AGAAAAGTGA
TGGGAGTGAA TTGGTTACAG GTGGGGTTGT TGAACGTGGA TGGGTACTAC AACTCGCTGC TGGCATTCAT GGACAAAGCT
GTGGACGAAG GTTTCGTAAC ACCTGCTGCC CGTCACATTA TTGTTTCTGC CCAAACTGCC CAAGACCTCA TGTGCAAACT
TGAGGTACAT GATAATATTT ATTTAATAAT TTTGATGTTA TGTAGAGTAT ATGATATATG CACAGGTGGG AGAACGTGGT
GGGTTGAATC CGATTTATCT GAACCGTTGA TTTTCCACTT GGAACAGGAA TATGTCCCCG AGCACTGTGG CGTGGCCCCC
AAGCTAAGTT GGGAGATGGA GCAACAGTTA GTTAACACTG CAAAGTCAGA TATTTCCCGT TGACTGAAAA ATAGAACAAC
GACAACAACA CTAAGGAGGA GCCTAGGTTG ATCTTAAATT TAGTGTATAA GTATAACCTC AGCAGCTAAA ATGTTCCACA
GAATAGGTTT TTAGTTCACC TGTGGATTTG TAATTCCAGA TTTTCACTCT GCAATTTTCT CTGTTGATTG TTTGGCTTTA
ACGCCTCAGA CCACTATGTA TTTTCATTTC TTAGCTACCA ACTAATTGTG CATTAGAATT TGACTTCGAT GCTCCAAGAA
GAACATATAT GAATACAGAT ATATAATGCA TATCGTGTCG GTGATTGATT TGTAATGCTG TGAGTTTCGT ATATAAATAT
AATTAAG

>Vigan.02G028700.01
GGTTTGATAT AGTACGAATA TATGAGAACC GCAAAGAAAC TCCAATAGCT TGATATCATG AGGTTTTTTC TAGGTACATA
ACGAAAAAAA AAACACATTA CAGCCTTAAC ATGATTTCTG TTCACAAACC AACTGCTAAC TGGGATTTCT TTTTGTTTGC
ATCAAAGATA TTATAACATT TAATTAAGAA TATTAATATG AGAAAAGTGT CGTACGTGTG ACGTACCGAC ATTGTACATT
TGTTTAAGGG TGTTAAAATG TTTTAGGAAA TTAGAAAGGA ATTATGAAAT TTGATATATA ACTGTAGAAG AAATGTATAA
TGGACGGAAT TTGGAAAAGG AATATACGGA GAACTAGAAA AGGAAAAAGG ATAGAGGAGT GAGTGTCAAT CAGATTCAAG
GAAGAATATG TCTGGAGACG AGATGAGAGA TGAGAGATGA GATGATGTGA GATGTGATGG AGAAATTGAT ATGATATGGT
GAATATTATC ATGTCATGTG TGGGTAGCAT GGCACTCTCA TTCTCATATT TATTTATGAG ACAGAGTGAC TATAAAGAGA
AGCAATGACA CCAATTCTCA TTCCCCCTCA CTTTTGGCTT CTCAGTGATT GCTGACTCCT TTTTTTTCTT TACTTTCCTT
TTTCTGCCAA ATATTATTAT TCTCTGTTCT CCTTCACTTC ACTTGCTCTA TTCATGGAAG CCCAACCGCA ACAATCACCC
TGCAAGTCTA GGTTCAGACG CATCTGTGTT TACTGCGGTA GCAGCCCTGG CAAAAGCCCC AGCTACCAGC TCGCTGCTGT
TCAACTCGGA AAACAACTGG TGGAGAGGAA GATTGACTTG GTGTATGGAG GAGGAAGCAT AGGCTTGATG GGTCTAATCT
CACAAGTTGT ATACGATGGT GGACGCCACG TGTTAGGGGT CATTCCAAAC ACGCTTAATG CAAGAGAGAT CACCGGCGAG
AGTGTTGGAG AAGTCAGAGC TGTATCGGGC ATGCACCAAC GCAAAGCAGA GATGGCCCGA CAGGCCGATG CATTCATTGC
ACTGCCAGGT GGATATGGCA CCCTTGAAGA ACTACTGGAA ATCATCACCT GGGCTCAGTT AGGTATCCAC GATAAACCGG
TGGGGTTGTT GAACGTGGAT GGGTACTACA ACTCGCTGCT GGCATTCATG GACAAAGCTG TGGACGAAGG TTTCGTAACA
CCTGCTGCCC GTCACATTAT TGTTTCTGCC CAAACTGCCC AAGACCTCAT GTGCAAACTT GAGGTACATG ATAATATTTA
TTTAATAATT TTGATGTTAT GTAGAGTATA TGATATATGC ACAGGTGGGA GAACGTGGTG GGTTGAATCC GATTTATCTG
AACCGTTGAT TTTCCACTTG GAACAGGAAT ATGTCCCCGA GCACTGTGGC GTGGCCCCCA AGCTAAGTTG GGAGATGGAG
CAACAGTTAG TTAACACTGC AAAGTCAGAT ATTTCCCGTT GACTGAAAAA TAGAACAACG ACAACAACAC TAAGGAGGAG
CCTAGGTTGA TCTTAAATTT AGTGTATAAG TATAACCTCA GCAGCTAAAA TGTTCCACAG AATAGGTTTT TAGTTCACCT
GTGGATTTGT AATTCCAGAT TTTCACTCTG CAATTTTCTC TGTTGATTGT TTGGCTTTAA CGCCTCAGAC CACTATGTAT
TTTCATTTCT TAGCTACCAA CTAATTGTGC ATTAGAATTT GACTTCGATG CTCCAAGAAG AACATATATG AATACAGATA
TATAATGCAT ATCGTGTCGG TGATTGATTT GTAATGCTGT GAGTTTCGTA TATAAATATA ATTAAG

>Vigan.02G028700.01
ATGGAAGCCC AACCGCAACA ATCACCCTGC AAGTCTAGGT TCAGACGCAT CTGTGTTTAC TGCGGTAGCA GCCCTGGCAA
AAGCCCCAGC TACCAGCTCG CTGCTGTTCA ACTCGGAAAA CAACTGGTGG AGAGGAAGAT TGACTTGGTG TATGGAGGAG
GAAGCATAGG CTTGATGGGT CTAATCTCAC AAGTTGTATA CGATGGTGGA CGCCACGTGT TAGGGGTCAT TCCAAACACG
CTTAATGCAA GAGAGATCAC CGGCGAGAGT GTTGGAGAAG TCAGAGCTGT ATCGGGCATG CACCAACGCA AAGCAGAGAT
GGCCCGACAG GCCGATGCAT TCATTGCACT GCCAGGTGGA TATGGCACCC TTGAAGAACT ACTGGAAATC ATCACCTGGG
CTCAGTTAGG TATCCACGAT AAACCGGTGG GGTTGTTGAA CGTGGATGGG TACTACAACT CGCTGCTGGC ATTCATGGAC
AAAGCTGTGG ACGAAGGTTT CGTAACACCT GCTGCCCGTC ACATTATTGT TTCTGCCCAA ACTGCCCAAG ACCTCATGTG
CAAACTTGAG GTACATGATA ATATTTATTT AATAATTTTG ATGTTATGTA GAGTATATGA TATATGCACA GGTGGGAGAA
CGTGGTGGGT TGAATCCGAT TTATCTGAAC CGTTGATTTT CCACTTGGAA CAGGAATATG TCCCCGAGCA CTGTGGCGTG
GCCCCCAAGC TAAGTTGGGA GATGGAGCAA CAGTTAGTTA ACACTGCAAA GTCAGATATT TCCCGTTGA

>Vigan.02G028700.01
MEAQPQQSPC KSRFRRICVY CGSSPGKSPS YQLAAVQLGK QLVERKIDLV YGGGSIGLMG LISQVVYDGG RHVLGVIPNT
LNAREITGES VGEVRAVSGM HQRKAEMARQ ADAFIALPGG YGTLEELLEI ITWAQLGIHD KPVGLLNVDG YYNSLLAFMD
KAVDEGFVTP AARHIIVSAQ TAQDLMCKLE VHDNIYLIIL MLCRVYDICT GGRTWWVESD LSEPLIFHLE QEYVPEHCGV
APKLSWEMEQ QLVNTAKSDI SR*