GBrowse Details

Vigan.01G509100.01

Basic Information:
Name: Vigan.01G509100.01
Multiple alignment
Variant Information
Position: Chr01:63682863..63686069 (- strand)
Length: 3207
Functional Information:
Description: Similar to Dihydrolipoyl dehydrogenase. [V7CBY7, Phaseolus vulgaris]
GO: Biological Process: cell redox homeostasis (GO:0045454)
Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: dihydrolipoyl dehydrogenase activity (GO:0004148)
Molecular Function: oxidoreductase activity (GO:0016491)
Molecular Function: oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor (GO:0016668)
Molecular Function: flavin adenine dinucleotide binding (GO:0050660)
InterPro: Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain (IPR001327)
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (IPR004099)
Dihydrolipoamide dehydrogenase (IPR006258)
Pyridine nucleotide-disulphide oxidoreductase, class I, active site (IPR012999)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase (IPR013027)
FAD/NAD-linked reductase, dimerisation domain (IPR016156)
Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain (IPR023753)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:110.46,69.39,60.93,113.29,60.27,103. 28,78.17,52.07
Arabidopsis thaliana homolog: AT1G48030.1, AT3G17240.1
Automatic updates:
Name: AF181096 NCBI(nuccore)
Organism: Vigna unguiculata
Description: Vigna unguiculata ferric leghemoglobin reductase (flbr) mRNA, complete cds.
PubMed ID: 10729615 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr01:63682863..63683534 (- strand)
Length: 672
Type: three_prime_UTR
Position: Chr01:63683535..63684785 (- strand)
Length: 1251
Type: CDS
Position: Chr01:63685749..63686000 (- strand)
Length: 252
Type: CDS
Position: Chr01:63686001..63686069 (- strand)
Length: 69
Type: five_prime_UTR

>Vigan.01G509100.01 class=Sequence position=Chr01:63682863..63686069 (- strand)
GTGTGCTAGG TTGTGAGAGG AAGTAGCTCA AATCAAATCC CAAGGAATCG GAAAAAAGAC AGAAGAATCA TGGCCATGGC
AAGCTTGGCT CGACGGAAGG CGTACGCTGT CGTTTCATCA TCCAGGTCGT CGCTTTTCCT CACAAGTTTG AGGGGATTCG
CATCCGGATC TGACGAAAAC GATGTTGTCG TCATCGGAGG CGGTCCCGGC GGCTACGTCG CCGCCATTAA AGCCTCGCAG
TTGGGTCTTA AAACCACTTG CATCGAAAAG CGTGGAACTC TCGGCGGCAC CTGTCTCAAC GTTGGATGCA TCCCTTCCAA
GGTTCATTAC CTTTTCATTT TCTTCTTCGC GCTTTGTTTT TCCTTTTTTT TATGGAGTTT TTCGTTTCTT TCTGTACCGG
ATTGGTAATT TGGTTTTCCT TTGTATTCTT GTGTCGTTTC TGATTGTTGT CTTTTTTTTC GGAAGAGATT GAAAGGAAAG
ACTCTTGAAT TTGGAATTTC TGTAGTGAAG GGCCTAATTT TGGTGTTGCA GATTTTTTTT TTTGGGAGTG AGAGGAGTGT
GTTTTGTTAT GACAAGGTGG TAGGGAAAAG GAGTTGAGGT GTGATGAAGC TGATGAAGTG TGAGCATGTG TTTCATTTCC
TCTTTTGTGG TTTTTACTAT CTAGGAATTG GGTGCAAGTA TGCTTCTGTG CTCTATTTTT TGTTTTGCAT AATTTTTCCT
GTTGAGTGGA TGAGTTGCTT GATTTGCAAT ATCAAAATTT AAGGTCTCAA CCGGAATATT AGCGGATGCG AGAACTTCTA
TTGTTTAGCT TGCTAAATTT TATACAATAA ATTGCTTTTT GTTCAACAAG TCTTGTCTCA CTAGGTGAGA CTGGTTTCAT
GAATCAGTAT TGGACGGTAA AAAAAATAAA TTTTCAGGGA TATAATTTAC CTTAAGACCC TTTTTAGTAA TTTCCTTCAA
TGCCTTCCAA TAAAGCTCAT CTCATTCATT GTATTTTGTT TTTTTCCATA TAAACTCATT TCACATCCTG CTGCAGATTA
TACTTTAACT TCTTTATAAT TTTCTCTACT GATCACCAAT ATGATCTCCA TCGTTGTCCA TCTGTAAACA AATATGCTCC
CATATATAAA CAATGTAATC TCATTTGATC CGTCCATCTA TCTGCTGTGA AAGACTATGG TTTTTGTTGT TTGTGTTTCC
ATTTGTAGTT TGAATAAAAT GATTTATATA GCATTCTAGA GATGTATGTA CTCATTTAGG AGGGTACCTC CATATTTGGT
TCAGGCGCTT TTGCATTCTT CCCACATGTA CCATGAGGCT AAACATGCCT TTGCCAACCA TGGAGTCAAG TGTTCATCTG
TCGAGGTTGA TTTAGCTGCC ATGATGGCTC AAAAGGATAA AGCTGTTTCG AATCTTACCA AGGGTATTGA AGGACTGTTC
AAAAAAAACA AGGTAAACTA TGTCAAAGGT TATGGCAAGT TTGTTTCACC ATCCGAAGTA TCTGTGGACA CCGTTGACGG
TGGAAATACT GTTGTGAAAG GAAAGCATAT CATAATTGCC ACTGGCTCGG ATGTGAAATC TCTACCTGGT GTCACTATTG
ATGAAAAGAA AATTGTATCA TCAACTGGTG CTCTTGCTTT GACTGAAATC CCCAAGAGAC TAGTAGTCAT TGGGGCAGGC
TACATTGGGC TAGAGATGGG CTCAGTATGG GGCCGACTTG GCTCTGAGGT AACAGTTGTT GAGTTTGCAT CAGAAATTGT
TCCAACCATG GATGCGGAGA TCCGGAAACA GTTTCAGCGT TCTCTTGAGA AGCAAGGCAT GAAATTCCAG CTGAAGACAA
AGGTTGTTGG AGTCGATACT TCTGGGGATG GTGTGAAGCT AACACTTGAA CCAGCTGCTG GTGGTGATCA GACTACACTT
GAAACAGATG TTGTCCTTGT ATCTGCAGGT AGGACTCCAT TCACTGCTGG ACTTGGGTTA GACAAGATAG GAGTTGAAAC
TGACAAGATC GGACGGATTT TGGTAAATGA AAGATTCACC ACAAATGTCT CTGGAGTTTA TGCGATTGGG GATGTAATTC
CAGGCCCAAT GTTGGCACAC AAGGCGGAAG AAGACGGGGT TGCTTGTGTG GAATACATAG CTGGAAAGGT TGGCCATGTG
GACTATGACA AAGTCCCAGG TGTTGTCTAT ACAACCCCCG AGGTTGCTTA TGTTGGGAAG ACAGAGGAGC AAGTGAAGGC
ACTTGGAGTT GAATACCGTG TTGGCAAATT CCCATTTATG GCTAACAGCA GAGCTAAGGC AATTGATAAT GCTGAAGGAC
TGGTGAAGAT ATTGGCTGAG AAGGAGACGG ATAAGATATT GGGAGTGCAT ATTATGGCAC CCAATGCAGG AGAGCTCATT
CACGAAGCAG CAATAGCACT ACAGTATGAT GCATCAAGTG AGGACATTGC ACGTGTGTGC CATGCACATC CAACAATGAG
CGAGGCTGTG AAAGAAGCCG CAATGGCCAC TTATGACAAG CCCATTCACA TATGAAGAGC TAGTTGCTTC TTCATTCTCG
TTTCATTTTT GTCCAACAAT TTTACAATGA CTTGGAGATG ATACCAGCTG TGTTAAATTT AGATTCAGGT TTTTAAATGA
AAATTATCCC CCTGTTTACT TGTTTGCATA ATAAGAGGAA TGATCGTGTT GTTCTTATCT CTGTTCAATA ATTTATATCT
CCCCTTCTCT CTGGGACAAT GTTGTAATTC TTACAGGGTG AAGACAACTT AAATGGGATT GTGAAACGGT TTGATTAACA
CATTGTTGGG TATTTATAAA TTATTTTTCA TCCACCCATA TCTTCTTATT AGCAGGAATT CTTACATGAG CAGGATACTT
GAAGGAATAA AAATGGTGAC CAAGCTGTGA AATTGAGTTC ATGATTAGTC TTATTCATCA AGTATCGTAC TCGTCTTCAA
GAAATATATG GGATGTTTCA GTTGGAGTAA ATACAGGTGC AAAGAACACG GGACAAAATA GGAAGATAAA GAGTGGTAGA
ATAGCTTTAA AGAATCAGCA ATGACATATG TAGGGGATTG GGACGTTGTT ACAATATCTT TATAATGAAA TGGGAAAGTT
TCATTTACAG AGTCTTTTTT TTTAGTGTGT AAATAGGAAT ATTTATTATT TATTATTGTC AGATTGGTAT AAAATAATAT
TTGAGTA

>Vigan.01G509100.01
GTGTGCTAGG TTGTGAGAGG AAGTAGCTCA AATCAAATCC CAAGGAATCG GAAAAAAGAC AGAAGAATCA TGGCCATGGC
AAGCTTGGCT CGACGGAAGG CGTACGCTGT CGTTTCATCA TCCAGGTCGT CGCTTTTCCT CACAAGTTTG AGGGGATTCG
CATCCGGATC TGACGAAAAC GATGTTGTCG TCATCGGAGG CGGTCCCGGC GGCTACGTCG CCGCCATTAA AGCCTCGCAG
TTGGGTCTTA AAACCACTTG CATCGAAAAG CGTGGAACTC TCGGCGGCAC CTGTCTCAAC GTTGGATGCA TCCCTTCCAA
GGCGCTTTTG CATTCTTCCC ACATGTACCA TGAGGCTAAA CATGCCTTTG CCAACCATGG AGTCAAGTGT TCATCTGTCG
AGGTTGATTT AGCTGCCATG ATGGCTCAAA AGGATAAAGC TGTTTCGAAT CTTACCAAGG GTATTGAAGG ACTGTTCAAA
AAAAACAAGG TAAACTATGT CAAAGGTTAT GGCAAGTTTG TTTCACCATC CGAAGTATCT GTGGACACCG TTGACGGTGG
AAATACTGTT GTGAAAGGAA AGCATATCAT AATTGCCACT GGCTCGGATG TGAAATCTCT ACCTGGTGTC ACTATTGATG
AAAAGAAAAT TGTATCATCA ACTGGTGCTC TTGCTTTGAC TGAAATCCCC AAGAGACTAG TAGTCATTGG GGCAGGCTAC
ATTGGGCTAG AGATGGGCTC AGTATGGGGC CGACTTGGCT CTGAGGTAAC AGTTGTTGAG TTTGCATCAG AAATTGTTCC
AACCATGGAT GCGGAGATCC GGAAACAGTT TCAGCGTTCT CTTGAGAAGC AAGGCATGAA ATTCCAGCTG AAGACAAAGG
TTGTTGGAGT CGATACTTCT GGGGATGGTG TGAAGCTAAC ACTTGAACCA GCTGCTGGTG GTGATCAGAC TACACTTGAA
ACAGATGTTG TCCTTGTATC TGCAGGTAGG ACTCCATTCA CTGCTGGACT TGGGTTAGAC AAGATAGGAG TTGAAACTGA
CAAGATCGGA CGGATTTTGG TAAATGAAAG ATTCACCACA AATGTCTCTG GAGTTTATGC GATTGGGGAT GTAATTCCAG
GCCCAATGTT GGCACACAAG GCGGAAGAAG ACGGGGTTGC TTGTGTGGAA TACATAGCTG GAAAGGTTGG CCATGTGGAC
TATGACAAAG TCCCAGGTGT TGTCTATACA ACCCCCGAGG TTGCTTATGT TGGGAAGACA GAGGAGCAAG TGAAGGCACT
TGGAGTTGAA TACCGTGTTG GCAAATTCCC ATTTATGGCT AACAGCAGAG CTAAGGCAAT TGATAATGCT GAAGGACTGG
TGAAGATATT GGCTGAGAAG GAGACGGATA AGATATTGGG AGTGCATATT ATGGCACCCA ATGCAGGAGA GCTCATTCAC
GAAGCAGCAA TAGCACTACA GTATGATGCA TCAAGTGAGG ACATTGCACG TGTGTGCCAT GCACATCCAA CAATGAGCGA
GGCTGTGAAA GAAGCCGCAA TGGCCACTTA TGACAAGCCC ATTCACATAT GAAGAGCTAG TTGCTTCTTC ATTCTCGTTT
CATTTTTGTC CAACAATTTT ACAATGACTT GGAGATGATA CCAGCTGTGT TAAATTTAGA TTCAGGTTTT TAAATGAAAA
TTATCCCCCT GTTTACTTGT TTGCATAATA AGAGGAATGA TCGTGTTGTT CTTATCTCTG TTCAATAATT TATATCTCCC
CTTCTCTCTG GGACAATGTT GTAATTCTTA CAGGGTGAAG ACAACTTAAA TGGGATTGTG AAACGGTTTG ATTAACACAT
TGTTGGGTAT TTATAAATTA TTTTTCATCC ACCCATATCT TCTTATTAGC AGGAATTCTT ACATGAGCAG GATACTTGAA
GGAATAAAAA TGGTGACCAA GCTGTGAAAT TGAGTTCATG ATTAGTCTTA TTCATCAAGT ATCGTACTCG TCTTCAAGAA
ATATATGGGA TGTTTCAGTT GGAGTAAATA CAGGTGCAAA GAACACGGGA CAAAATAGGA AGATAAAGAG TGGTAGAATA
GCTTTAAAGA ATCAGCAATG ACATATGTAG GGGATTGGGA CGTTGTTACA ATATCTTTAT AATGAAATGG GAAAGTTTCA
TTTACAGAGT CTTTTTTTTT AGTGTGTAAA TAGGAATATT TATTATTTAT TATTGTCAGA TTGGTATAAA ATAATATTTG
AGTA

>Vigan.01G509100.01
ATGGCCATGG CAAGCTTGGC TCGACGGAAG GCGTACGCTG TCGTTTCATC ATCCAGGTCG TCGCTTTTCC TCACAAGTTT
GAGGGGATTC GCATCCGGAT CTGACGAAAA CGATGTTGTC GTCATCGGAG GCGGTCCCGG CGGCTACGTC GCCGCCATTA
AAGCCTCGCA GTTGGGTCTT AAAACCACTT GCATCGAAAA GCGTGGAACT CTCGGCGGCA CCTGTCTCAA CGTTGGATGC
ATCCCTTCCA AGGCGCTTTT GCATTCTTCC CACATGTACC ATGAGGCTAA ACATGCCTTT GCCAACCATG GAGTCAAGTG
TTCATCTGTC GAGGTTGATT TAGCTGCCAT GATGGCTCAA AAGGATAAAG CTGTTTCGAA TCTTACCAAG GGTATTGAAG
GACTGTTCAA AAAAAACAAG GTAAACTATG TCAAAGGTTA TGGCAAGTTT GTTTCACCAT CCGAAGTATC TGTGGACACC
GTTGACGGTG GAAATACTGT TGTGAAAGGA AAGCATATCA TAATTGCCAC TGGCTCGGAT GTGAAATCTC TACCTGGTGT
CACTATTGAT GAAAAGAAAA TTGTATCATC AACTGGTGCT CTTGCTTTGA CTGAAATCCC CAAGAGACTA GTAGTCATTG
GGGCAGGCTA CATTGGGCTA GAGATGGGCT CAGTATGGGG CCGACTTGGC TCTGAGGTAA CAGTTGTTGA GTTTGCATCA
GAAATTGTTC CAACCATGGA TGCGGAGATC CGGAAACAGT TTCAGCGTTC TCTTGAGAAG CAAGGCATGA AATTCCAGCT
GAAGACAAAG GTTGTTGGAG TCGATACTTC TGGGGATGGT GTGAAGCTAA CACTTGAACC AGCTGCTGGT GGTGATCAGA
CTACACTTGA AACAGATGTT GTCCTTGTAT CTGCAGGTAG GACTCCATTC ACTGCTGGAC TTGGGTTAGA CAAGATAGGA
GTTGAAACTG ACAAGATCGG ACGGATTTTG GTAAATGAAA GATTCACCAC AAATGTCTCT GGAGTTTATG CGATTGGGGA
TGTAATTCCA GGCCCAATGT TGGCACACAA GGCGGAAGAA GACGGGGTTG CTTGTGTGGA ATACATAGCT GGAAAGGTTG
GCCATGTGGA CTATGACAAA GTCCCAGGTG TTGTCTATAC AACCCCCGAG GTTGCTTATG TTGGGAAGAC AGAGGAGCAA
GTGAAGGCAC TTGGAGTTGA ATACCGTGTT GGCAAATTCC CATTTATGGC TAACAGCAGA GCTAAGGCAA TTGATAATGC
TGAAGGACTG GTGAAGATAT TGGCTGAGAA GGAGACGGAT AAGATATTGG GAGTGCATAT TATGGCACCC AATGCAGGAG
AGCTCATTCA CGAAGCAGCA ATAGCACTAC AGTATGATGC ATCAAGTGAG GACATTGCAC GTGTGTGCCA TGCACATCCA
ACAATGAGCG AGGCTGTGAA AGAAGCCGCA ATGGCCACTT ATGACAAGCC CATTCACATA TGA

>Vigan.01G509100.01
MAMASLARRK AYAVVSSSRS SLFLTSLRGF ASGSDENDVV VIGGGPGGYV AAIKASQLGL KTTCIEKRGT LGGTCLNVGC
IPSKALLHSS HMYHEAKHAF ANHGVKCSSV EVDLAAMMAQ KDKAVSNLTK GIEGLFKKNK VNYVKGYGKF VSPSEVSVDT
VDGGNTVVKG KHIIIATGSD VKSLPGVTID EKKIVSSTGA LALTEIPKRL VVIGAGYIGL EMGSVWGRLG SEVTVVEFAS
EIVPTMDAEI RKQFQRSLEK QGMKFQLKTK VVGVDTSGDG VKLTLEPAAG GDQTTLETDV VLVSAGRTPF TAGLGLDKIG
VETDKIGRIL VNERFTTNVS GVYAIGDVIP GPMLAHKAEE DGVACVEYIA GKVGHVDYDK VPGVVYTTPE VAYVGKTEEQ
VKALGVEYRV GKFPFMANSR AKAIDNAEGL VKILAEKETD KILGVHIMAP NAGELIHEAA IALQYDASSE DIARVCHAHP
TMSEAVKEAA MATYDKPIHI *