GBrowse Details

Vigan.01G451100.01

Basic Information:
Name: Vigan.01G451100.01
Multiple alignment
Variant Information
Position: Chr01:58178687..58180874 (+ strand)
Length: 2188
Functional Information:
Description: Similar to isoaspartyl peptidase/L-asparaginase-like. [XP_004508653.1, Cicer arietinum]
GO: Molecular Function: hydrolase activity (GO:0016787)
InterPro: Peptidase T2, asparaginase 2 (IPR000246)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:2.91,0.35,4.71,14.12,4.89,49.46,11.25,8.42
Arabidopsis thaliana homolog: AT5G08100.1
Automatic updates:
Name: NM_001254228 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max isoaspartyl peptidase/L-asparaginase-like (LOC100799400), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:58178687..58178790 (+ strand)
Length: 104
Type: five_prime_UTR
Position: Chr01:58178791..58178952 (+ strand)
Length: 162
Type: CDS
Position: Chr01:58179044..58179277 (+ strand)
Length: 234
Type: CDS
Position: Chr01:58179375..58179461 (+ strand)
Length: 87
Type: CDS
Position: Chr01:58179810..58180295 (+ strand)
Length: 486
Type: CDS
Position: Chr01:58180296..58180874 (+ strand)
Length: 579
Type: three_prime_UTR

>Vigan.01G451100.01 class=Sequence position=Chr01:58178687..58180874 (+ strand)
GTATGAAATA ATATTTTGGT GTGACAGAGA ATGGGAGTTA GTGTGGGTAG TTAAGAGCGA GTCATCTTCA CAACAGAGAC
ACACTCAACA AACAACAGCA ACGTATGGGT TGGGCCATAG CTCTACACGG TGGCGCCGGC GACATCCCTC TCTCGCTAGC
ACCGGAGCGC CGTCAGCCAC GAGAGGAAGC CCTCCGCCAC TGCCTCCAAA TCGGCGTCGA AGCTCTCAAA GCCAAACTGC
CTCCTCTCGA TGTGGTTGAG CGCGTCGTAC GTATCATATC AATCATCCTC ACAAGTACGT ATTACGTATT TATGTATGGT
GATTTATTGA TTCTTTTTTG TCTTGGAGGG TGTTTAGGTT CGGGAGTTGG AGAACATTCC TCAGTTCAAC GCGGGGAAGG
GATCTGTGCT CACTTCCAAA GGCACCGTCG AAATGGAAGC TTCAATCATG GACGGCACCA CTATGAATTG CGGAGCCGTT
TCCGGCCTCA CTACGGTTGT CAACGCCGTC TCTCTCGCTC GATTGGTCAT GGAGAAGACG CCTCACATTT ATCTCGCTTT
CGATGGAGCA GAGGAATTTG CAAGACAACA AGTTACTCTC CTTTCCGTTT CTTATCATCG TCATTTATTA CTACTATAAC
TTCAACAACA CTCGTCTTTC TTCCTCATTA ATCATCCTTC GTCTTCAGGG AGTTGAGACT CTCCATTCAA GCCATTTTAT
CACCGCAGAA AACATTGAAA GGCTAAAGCA GGCAATAGAA GCCAATAGGG TCCAGGTACT TAATTTTGAA AGCAAGCATG
CATTTACTCT GCATATATTT TATTTATGTC ATACTGTTTG TTTTCTTATC AAAACTCATT TCTTTTCAGT ATTTTTTTAT
TACACTTTGA TGCTAATGTA GCTTTTATTC TCATCCTCTT GTCGGAATTG TAATTTCATT TTAATCATTT GTACAATGTA
GGTTTGCATT AAATATTAAT ATAAATTGCT TGAGTGCTCT AATTTTAATC AGACAACATT ACTAAAACAT GCTTAAGAAA
GTACATATAA GTTGTTTCCT TACATTAATC GCCTCAAAGT TCCTTTTTTA TTCTTCCAAC GATGTTGATT CACATATATG
TAGATTGACT ACACCCAACC TATCCAAAAC GATACCAAGA AAGAAACAGC AATTGCTAAT GGTGATAGTC AAATTGGAAC
TGTTGGGTGT GTGGCTGTTG ATGGTAATGG AAATTTAGCT TCTGCAACAT CTACTGGTGG ACTAGTGAAC AAAATGGTTG
GCCGAATTGG TGACACGCCG GTCATAGGTG CTGGGACCTA TGCTGATACA CGTTGTGCAG TTTCGGCAAC AGGCAAAGGT
GAAGCAATAA TACGAGGAAC TGTGGCAAGA GATGTCGCTG CTCTGATGGA GTTTAAGGGT CTTTCTCTCG AGGAAGCTGC
GACTTGTGTT GTGCATGAAC GCACGCCAAA AGGCACTGTT GGTTTGGTTG CTGTGTCTGC CAAAGGAGAA GTTGCAATGC
CTTTTAATAC AACAGGCATG TTCAGAGCTT GTGCTACTGA AGATGGGTAT TCTGAGATTT CAATTTGGCC TGCTGCCAAA
TTTGAGTGAT CTTTTTCTGA TTCCCAAGCT TAATGTATTC TGACATTTGA TGATGCTTCA TGCGCTTATG TCAAAGGAAA
ATCTATATGC TTTTCAAGGT ACAGATTGCC ATTATCGATG ACATCTGTGT TTTTTTGTGT AGTTTGTGCC ACATTGTGAA
TGTGATCACC TTATCATTAT CAGGTGTTTT ATAATCATCG TCTTCCATAA ATGCTGACGG GAAAACAACC ATAACGCAAT
ATAACCTATG CTCTTGACCT CTGATAGAGC ATAACTGTCA ATAACAGCGT AAATTTTATT AGTGAACCAG ATCAAACATC
AAAATTTAAT CTCACGTGAG ATTCCACATG GACTTTGTCA AGGCAAAACG ATAACCAACA CTTCCTGTTT GTTGGAGTGA
TAGAGAACTT GTGAACTTTT CTGGCCAGGG AAGGTTAAAG ACTTCAAGAG TTAATTTATC ACAAATTAGA TGATCAGCAT
ACAGACTTCA TTGTTTGTTT TGTTATGCAC AGTTCTTGCA GAATTACAGT ACTTTAATTT TTTTGTTGGT TTCTCCTACA
ATATATATCA GTGTTTTCCT TTATTATA

>Vigan.01G451100.01
GTATGAAATA ATATTTTGGT GTGACAGAGA ATGGGAGTTA GTGTGGGTAG TTAAGAGCGA GTCATCTTCA CAACAGAGAC
ACACTCAACA AACAACAGCA ACGTATGGGT TGGGCCATAG CTCTACACGG TGGCGCCGGC GACATCCCTC TCTCGCTAGC
ACCGGAGCGC CGTCAGCCAC GAGAGGAAGC CCTCCGCCAC TGCCTCCAAA TCGGCGTCGA AGCTCTCAAA GCCAAACTGC
CTCCTCTCGA TGTGGTTGAG CGCGTCGTTC GGGAGTTGGA GAACATTCCT CAGTTCAACG CGGGGAAGGG ATCTGTGCTC
ACTTCCAAAG GCACCGTCGA AATGGAAGCT TCAATCATGG ACGGCACCAC TATGAATTGC GGAGCCGTTT CCGGCCTCAC
TACGGTTGTC AACGCCGTCT CTCTCGCTCG ATTGGTCATG GAGAAGACGC CTCACATTTA TCTCGCTTTC GATGGAGCAG
AGGAATTTGC AAGACAACAA GGAGTTGAGA CTCTCCATTC AAGCCATTTT ATCACCGCAG AAAACATTGA AAGGCTAAAG
CAGGCAATAG AAGCCAATAG GGTCCAGATT GACTACACCC AACCTATCCA AAACGATACC AAGAAAGAAA CAGCAATTGC
TAATGGTGAT AGTCAAATTG GAACTGTTGG GTGTGTGGCT GTTGATGGTA ATGGAAATTT AGCTTCTGCA ACATCTACTG
GTGGACTAGT GAACAAAATG GTTGGCCGAA TTGGTGACAC GCCGGTCATA GGTGCTGGGA CCTATGCTGA TACACGTTGT
GCAGTTTCGG CAACAGGCAA AGGTGAAGCA ATAATACGAG GAACTGTGGC AAGAGATGTC GCTGCTCTGA TGGAGTTTAA
GGGTCTTTCT CTCGAGGAAG CTGCGACTTG TGTTGTGCAT GAACGCACGC CAAAAGGCAC TGTTGGTTTG GTTGCTGTGT
CTGCCAAAGG AGAAGTTGCA ATGCCTTTTA ATACAACAGG CATGTTCAGA GCTTGTGCTA CTGAAGATGG GTATTCTGAG
ATTTCAATTT GGCCTGCTGC CAAATTTGAG TGATCTTTTT CTGATTCCCA AGCTTAATGT ATTCTGACAT TTGATGATGC
TTCATGCGCT TATGTCAAAG GAAAATCTAT ATGCTTTTCA AGGTACAGAT TGCCATTATC GATGACATCT GTGTTTTTTT
GTGTAGTTTG TGCCACATTG TGAATGTGAT CACCTTATCA TTATCAGGTG TTTTATAATC ATCGTCTTCC ATAAATGCTG
ACGGGAAAAC AACCATAACG CAATATAACC TATGCTCTTG ACCTCTGATA GAGCATAACT GTCAATAACA GCGTAAATTT
TATTAGTGAA CCAGATCAAA CATCAAAATT TAATCTCACG TGAGATTCCA CATGGACTTT GTCAAGGCAA AACGATAACC
AACACTTCCT GTTTGTTGGA GTGATAGAGA ACTTGTGAAC TTTTCTGGCC AGGGAAGGTT AAAGACTTCA AGAGTTAATT
TATCACAAAT TAGATGATCA GCATACAGAC TTCATTGTTT GTTTTGTTAT GCACAGTTCT TGCAGAATTA CAGTACTTTA
ATTTTTTTGT TGGTTTCTCC TACAATATAT ATCAGTGTTT TCCTTTATTA TA

>Vigan.01G451100.01
ATGGGTTGGG CCATAGCTCT ACACGGTGGC GCCGGCGACA TCCCTCTCTC GCTAGCACCG GAGCGCCGTC AGCCACGAGA
GGAAGCCCTC CGCCACTGCC TCCAAATCGG CGTCGAAGCT CTCAAAGCCA AACTGCCTCC TCTCGATGTG GTTGAGCGCG
TCGTTCGGGA GTTGGAGAAC ATTCCTCAGT TCAACGCGGG GAAGGGATCT GTGCTCACTT CCAAAGGCAC CGTCGAAATG
GAAGCTTCAA TCATGGACGG CACCACTATG AATTGCGGAG CCGTTTCCGG CCTCACTACG GTTGTCAACG CCGTCTCTCT
CGCTCGATTG GTCATGGAGA AGACGCCTCA CATTTATCTC GCTTTCGATG GAGCAGAGGA ATTTGCAAGA CAACAAGGAG
TTGAGACTCT CCATTCAAGC CATTTTATCA CCGCAGAAAA CATTGAAAGG CTAAAGCAGG CAATAGAAGC CAATAGGGTC
CAGATTGACT ACACCCAACC TATCCAAAAC GATACCAAGA AAGAAACAGC AATTGCTAAT GGTGATAGTC AAATTGGAAC
TGTTGGGTGT GTGGCTGTTG ATGGTAATGG AAATTTAGCT TCTGCAACAT CTACTGGTGG ACTAGTGAAC AAAATGGTTG
GCCGAATTGG TGACACGCCG GTCATAGGTG CTGGGACCTA TGCTGATACA CGTTGTGCAG TTTCGGCAAC AGGCAAAGGT
GAAGCAATAA TACGAGGAAC TGTGGCAAGA GATGTCGCTG CTCTGATGGA GTTTAAGGGT CTTTCTCTCG AGGAAGCTGC
GACTTGTGTT GTGCATGAAC GCACGCCAAA AGGCACTGTT GGTTTGGTTG CTGTGTCTGC CAAAGGAGAA GTTGCAATGC
CTTTTAATAC AACAGGCATG TTCAGAGCTT GTGCTACTGA AGATGGGTAT TCTGAGATTT CAATTTGGCC TGCTGCCAAA
TTTGAGTGA

>Vigan.01G451100.01
MGWAIALHGG AGDIPLSLAP ERRQPREEAL RHCLQIGVEA LKAKLPPLDV VERVVRELEN IPQFNAGKGS VLTSKGTVEM
EASIMDGTTM NCGAVSGLTT VVNAVSLARL VMEKTPHIYL AFDGAEEFAR QQGVETLHSS HFITAENIER LKQAIEANRV
QIDYTQPIQN DTKKETAIAN GDSQIGTVGC VAVDGNGNLA SATSTGGLVN KMVGRIGDTP VIGAGTYADT RCAVSATGKG
EAIIRGTVAR DVAALMEFKG LSLEEAATCV VHERTPKGTV GLVAVSAKGE VAMPFNTTGM FRACATEDGY SEISIWPAAK
FE*