GBrowse Details

Vigan.01G390500.01

Basic Information:
Name: Vigan.01G390500.01
Multiple alignment
Variant Information
Position: Chr01:53028986..53034950 (- strand)
Length: 5965
Functional Information:
Description: Similar to Uncharacterized protein. [I1MUQ1, Glycine max]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616)
Molecular Function: cofactor binding (GO:0048037)
InterPro: UBA/THIF-type NAD/FAD binding fold (IPR000594)
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (IPR006140)
Molybdenum cofactor biosynthesis, MoeB (IPR009036)
NAD(P)-binding domain (IPR016040)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:3.09,4.63,21.98,14.61,33.64,30.21,20.70,21.10
Arabidopsis thaliana homolog: AT1G05350.1
Automatic updates:
Name: BT097036 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-25P12 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:53028986..53029117 (- strand)
Length: 132
Type: three_prime_UTR
Position: Chr01:53029118..53029254 (- strand)
Length: 137
Type: CDS
Position: Chr01:53030480..53030526 (- strand)
Length: 47
Type: CDS
Position: Chr01:53030730..53030845 (- strand)
Length: 116
Type: CDS
Position: Chr01:53030967..53031053 (- strand)
Length: 87
Type: CDS
Position: Chr01:53031262..53031336 (- strand)
Length: 75
Type: CDS
Position: Chr01:53031551..53031625 (- strand)
Length: 75
Type: CDS
Position: Chr01:53031908..53031990 (- strand)
Length: 83
Type: CDS
Position: Chr01:53032391..53032427 (- strand)
Length: 37
Type: CDS
Position: Chr01:53032526..53032678 (- strand)
Length: 153
Type: CDS
Position: Chr01:53032826..53032894 (- strand)
Length: 69
Type: CDS
Position: Chr01:53033179..53033307 (- strand)
Length: 129
Type: CDS
Position: Chr01:53034132..53034245 (- strand)
Length: 114
Type: CDS
Position: Chr01:53034356..53034424 (- strand)
Length: 69
Type: CDS
Position: Chr01:53034566..53034655 (- strand)
Length: 90
Type: CDS
Position: Chr01:53034656..53034950 (- strand)
Length: 295
Type: five_prime_UTR

>Vigan.01G390500.01 class=Sequence position=Chr01:53028986..53034950 (- strand)
TCTTAATCAG GACAAAAAAA TTGTTAATAC ACTAACCAAA GCAAGTAGCG GCAGCACCAG GGAGAGTTGA AGTTAGAGCC
TATGCTGGTG ATCCTAGTGG ACTGATAGGC TTAGATACAA TAACAGGGAG CCAGGCCACC TCTCTCTGAC TACAGCGCCA
ACCATCAATA CATTGCTCTA AAACTTCAAA CTCAGGGTTT CTGGATATTC CAAATTTCCA ACTATCCACA GAAACCCGCG
ATCCGCACAA AACAGAATAC AGGCGTTTGA AAAACGCTGT TGATTCCAGA GCGAGATGGA GGTCGAACTC AAACAGTTGA
ACGCCGATCT TCAATTTCTG AGTCAATCGC TTCCCGATCC ATCTCACCAT GCTTTGCTCG ACAAGGTTTT TCTTCTTTTC
AATTCCGAAT TTATATCCCG ATTCCATCAA TTAAGCTGAA GACTCCTCAC GAGTGTTAAT GTACGTTATT AGATCCGATT
ATAAAATAAC GAAAATGTGT GTATTTTTGC TTTTATTTTT TTGAAGATTC AATTGCGTGT TGAGGAACTT GGCAAGCTTG
CAGCGGCTGC ACCTGTTCGA CGCTCCAAAG TCGAGGTAAT TGAATTGCCT ATTGGTCTGG TACATCACTG TATTTTTTTT
TATTTGATGA ATTTACAGTG TTAAGTTTAA TTGAATGGTT TTTCTTCTTA TTACATTGTT GCCAGGATAT GAGTGCTGAG
GTTGTAGATA GCAATCCTTA TAGTCGGCTT ATGGCACTTC AGAGAATGGG TATTGTGGAG AACTATGAAA GAATACGCGA
TTTCTCCGTT GCCATAGTTG TCTGTATTAA TCTCCTTTAT CACTCTTATT TGCTGTAGCA TAAAATTTGT GACTTGCGTG
TTTTTTATTT TTTTAGTTAT TTGAATATCT AATGGCATAA ATTAATAAGT TCCAAAGACC GAAGTGCGTT GAATCACAAG
AGCATGAAAC ATTATTCTTC CCCCTTGGGA TTTAATTAAG GAGTTCTTGT CGTTAATTCC TCTTAGAATC ACCTTTATTT
TGGGAACTGC TTAGAATGAC ATTCTTATTG TTTATTTATG GTCATTTCTT TTGATAAGAA ATTAGGAATA TATACCGTCT
AAGTTCTGAG CATAGATAAT AAGCTTGTTG GAGTATTTTT TTATCCATTG CTAAAATATT TTCCAATATG ACATAATTTA
TGGTGAATAT ACTGTTCATA TGGAGCATAA CTTAATCTGC ATTTTTTTAT TGAAATATGT GATTAGAGTT ATCTACCTTT
GGCAATCTTG TTTTAGTATG TTTAGAAGTT ATTCCATGTT CTATTTGTAC ATAAAGGATT GTTATGCGTG ACATTTAATT
AGACTAACTA TCTAGCTATA ATTGGACATA AACTCCTTTA ATTCAGATCA TACTCACTGA GAAAATACTT GATTTATGCA
AGTGTTTCTA CGGCCTTGCT GAATTTTTAT ATTAGAGGAT AAGCCTTTTG GTCATGAACA TAAACAATGG ATGAATAATT
TTGTAGAGGA TAAACCAATA GGTGATCCTG ACTATTTTTA ACTCTATCGA AAAGATCCTC TCAATTGCTT TCTTCTGTTT
TCATTGAAAA AATTAATTTT GGGTTATTCT TGCACAAACA CAGGGGATAG GTGGTGTAGG AAGTGTTGCA GCTGAGATGC
TGACTAGATG CGGCATAGGT CGACTTTTGT TGTATGATTA TGACAAAGTG GAGCTTGCAA ACATGAATAG GTTGTTCTTT
CGTCCAGATC AGGTGAGTAC CCAATTCTTC ATTTTCTTGT TTTGCAATTA TTTATTTTTG TATGTTTATC ATTTTTACAC
ATTATGTCAT GAAATTGAAA GGGCTAATAA CATGAGTGAT TTTTAACATT AATTCTCTTG GCTGACAAAG TGAAAATGTG
AAGTTTGATG CTAATAGCTA ACTGAAGAAT TTTGTACAAC AAAGCTATAT ATTAAATTAT ATTTGCCATC ATGAAGTTTC
TAGAAGTGCC CTGTGTCCTT ACCATAAATT GTGATATAAT ATTTTTAGCT TTCCAGGTTG GTTTGACTAA GACAGATGCA
GCTGTACAGA CTCTTTCAGA CATAAACCCT GATGTTGTAC TAGAGGTAAA TATTATGCAG TGTTTATAGG CATGGGATCT
TTTCACGTAT CGATGTAACT GTTAAAATGA ATCTTTATAA ACATTTTAAT GATTGGTAAT ATGTTAATAC ACTTTATCTG
CTGACATATT TCCCTTTTCC TTTTTGATTT AGAGCTATAC ACTGAATATC ACAACCGTCA CAGGTTTTGA AACCTTTATG
TCAAGTTTGA AAAAAAAATC ATTTTGCCCA AATAAAGAAG GGAGTGGCGT GGATCTGGTT TTAAGTTGTG TGGATAATTA
CGAAGCAAGA ATGGCTGTTA ACCAGGTATA TAAAAAATCA TTTCAATTAA AAACAATTAC TTTTCTTCTG TTTGGTTTTC
CCTAGGGATT CTCATGTCTG ACTGATTTCT GGAAGCACTG CAGGCCTGTA ATGAATTGAG TCAAACATGG ATGGAGTCAG
GTAAGCATAA GGATCTGCAG ATCTCTTCTC TTGTTAGGGA TAAAATTCGT GGACTTGTTT ATGGAAGGAA ACTAAATTTC
TCTAGATTGA CTCCACCTTT GTCGATATTA TGGAGTAGCA ATGTGAAAAG AATCGTTGAT ACTCAAAGAT AGAAATAAAC
ATGGTTTTGA TAAATATTGC AAAACATAAT TTTCCTTTGC CAATATTTCA TGGTGCTAAA AGAGTATGCA TTCCTTCGTA
TCTATACGTG GCTACTGACT ATTTACTGGC ATATGTTATA CAGGCCAGCA TCTAATGCAT CTATATGCAA TATTTTTTAT
TTTTTATTTT TGCAGTCTGT ATGTATGAAG TATGGATCTT CTTTTGTGTG GAAACTCATG AAATATACAA ATTTGAACAG
GTGTTTCTGA GGATGCTGTT TCTGGCCATA TTCAATTACT TATTCCTGGT GAAACTGCCT GTTTTGCTTG TGCCCCTCCT
CTGGTATGGC TCATTCTTAT ATGAGTTTGT GTATGAATCA TAATTGACGA TGAGTGGCCT TAAGGGATTA AACTTACTTA
TATCTGGTAC TATACATGAT TTCTGAAGCT CATCCATAGG AGATAGATGC TTGAGCTATT TAATAACTAG ATATAAAAAA
ACTTTGGATG AATTACTTTA TAGCTAGTCT ATTGATGTGT GTAATTTCAT CCACCTTACA GTAAATGTGA GTCTTTTATG
CAGTATGTAC AACATGTGAA GCATGCATTA ACGTTTTCCT TTTAGGTTGT TGCATCTGGG GTAGATGAAC GCACACTCAA
GCGTGAAGGG GTCTGTGCTG CCTCTTTACC CACCACTATG GTAAACTATG ATTCTCTATA TCTTACATTG GCTGCTTCTC
TTCATAGTTT TAAATTCAAA TACTTTGTGA TGTTATATCT TTTTAAATTT TCAATAGATA TGACATTTTC AACTAATTTT
AGGGGCTTAT TTATTTATGT TAGTTGTTTA GAGTGTGCAG CACACTTTTA GTTTATTGTT ATCTAACATT ACCAAATCTT
ATTTGATTTC CTAGGGGGTT GTTGCTGGCC TTCTAGTCCA AAACACACTA AAATTATTGT TAGGCTTTGG ACAAGTCTCT
CCATATTTGG TAAGGGATGG ATTGGTGTTT TCTTTATTCT TCTTCCTGAG TTGTTACAAA TGGTTCCTTT ATTCTAAAAA
ACAAATTAAC AAAGTAACAA ACTGAGTTCA TTCTTCAGAG GAATCTGGTG AGACTACTTC AATGAAAGAC AGTCTCTGTT
TTTGTTAAAT ACATTAACTG TATGCTAATA TGCTCACACT GGTTTGTTTA TCTTTAGGGA TATAATTCTC TAAAGGATTT
TTTTCCAACT ATGCAAATGA AGCCAAACCC TCAATGTTCA AATGTTGCTT GCTTGAAAAG ACAGGTCAGT TGTTTATGTT
TTGAAATTTT GAAAGTAATG AAAGTGTTTA CAATCGTGTC CTATCGATCT CGTCAATAAA TTCATCGCTC CTTCCAAATA
CGAAACTGCT ATACATGTCA TGCAGGAAGA ATACATGCTT GCAAAACCAG CAAGAGATGC TGCAGCCAAA GCAAAAATGG
AAGCTGAAGT ACTATCAACT GAGGAAGTGC CACTTCACGA CGATAATGAA TGGAATATAA GGTGTTTAAT GACTCTGTTC
TTGTTCATTT GTATGTGTGT AAGAGAAGAT ACGAAACACA CTTATCAGTT AGCATAGATT TATCCTTGAT TTACTACTAA
TCGCTATCAT TTATGCAAAG TACCCAATAG TATCAAACGT TATTCCTTCT GTTGAAATTT TATAGCCTTT ACATGTAATG
ATGTTCTTTT GCATTAATTT CCAGTGTTGT TGATGATGTT GAGCTGGATG GTCCGGATAC CAGAAGTTCA GGTATTATAT
TATTTACATT TTTTGACAGT GTAAATTCAT AATCATAAGC TCAGAATTTA TCCTTCCTTA CAAGTGAATT AAAGTGCTGC
ATGCTTTTCT ATGTGGTTGT TATCACTGCT AGATAATTCA GGAAGTAAAA AATGTTGGTA CTAAAATTTG CATGGCCCCA
CTTCTTGTGG ATGTGGTCAG CTTATATAAT TTTATAAGTG CTTTTATAGT AACAATGAAA TAAAATAAAA AGTTAGAATG
AATAAAAATT CTCTAAATTT TATATTATGC ATCTTAACCT ATGAAGCTCG GACATGCCTC ATAAATGGCG TGTCCCCGAG
TTTGACAAGT ATCAGACCCC GCATACGACA CTCGTACGAC ACGTATCAGA TAAATGTCCA ATTGAAAAGA CATATTTTTG
TCTTTGACAT AACCTTGACA TGGTTTCAAC AGCATGTTAA TAAGGAAAAA TGCTATTATT TTCTAAAAAC TCAAACTTGT
AAACTTATTG TTTAAGTTTC TATTATCATT ATAGAAATAA AGAACAAATA TTATATGATC ACTACTTTTA ACTTTTTGAT
ACTAGATAGA TGGATTAGAT TCAGTTTTAT ATTAAATGAC AATATTTATA TTATTATATT TGACTATTGT TGTTTATAAA
TGATTTTAAA TATATAAATA TTGATTGTTA AATGAAATAA TTCATAATGA TCTAATATTA GATATGTGTC CTCGTGTCCT
ACGTTTTGGA GACTACAAGT ATTGAAGTGT TCGTGTCCCC TGTCCCTGTC AGTATCCATG CTACATAGAT CTTAACTTTT
TCAGAAGTTA AATGAAGAAA CTTTTAAAAC AATGTTGAAG TACATAGATT GATTTTATCT TGTGAAAGGA TGATTCACTT
AACTTGTGCA ACTCATTTTT ATTTTTAAGA GCTCACTGAA ACTGGCCCAA AGATGCATTG ATTGGTTCCC TAGTTTGTCG
GAACACGGGT GAAATTCAGC TCCTTACTGT AAATGTTTTC ACATAAAATG TTGCTTTCTC TGGTGCACCA TTACTGCAAA
AGCGCAAAGT TTTATCCCTT ATGACATTTT GGTCCGTCCA AAGGTTAAAT TGCTATTGAA AATATTAGTA GGGAATGCGT
TTACATTTCG ATCTGAAGGG TTCAAGATCT GTTTTTGTTT TCGGTGTTCA TTTTCAATTA ATATTTATAT TAACCTTTTC
TCAATATGTA TTTCAGATGT TCTGCCGGAA GGTCTCACAC ATGAACTTCC TAGTGCAGAC GAGTTTCATG AGGCAACTCC
TGACGCTCCA GTAGCTGACA ATGACGACCT TGAAGATCTT CGTAGGCAAC TTGAAGCCAT TAATTCTGCA TAGTATAGTG
TCAAAATATT TTTGCCTTTT TTAAAGGAAA AAATTTCTGA ATTTAATTGT TCAATTGAGC CAGATTAACT TTGAAAATTG
AGAAAAACTA ATGTTAAATT ATTGACTATT TTGACAATCC ATCCT

>Vigan.01G390500.01
TCTTAATCAG GACAAAAAAA TTGTTAATAC ACTAACCAAA GCAAGTAGCG GCAGCACCAG GGAGAGTTGA AGTTAGAGCC
TATGCTGGTG ATCCTAGTGG ACTGATAGGC TTAGATACAA TAACAGGGAG CCAGGCCACC TCTCTCTGAC TACAGCGCCA
ACCATCAATA CATTGCTCTA AAACTTCAAA CTCAGGGTTT CTGGATATTC CAAATTTCCA ACTATCCACA GAAACCCGCG
ATCCGCACAA AACAGAATAC AGGCGTTTGA AAAACGCTGT TGATTCCAGA GCGAGATGGA GGTCGAACTC AAACAGTTGA
ACGCCGATCT TCAATTTCTG AGTCAATCGC TTCCCGATCC ATCTCACCAT GCTTTGCTCG ACAAGATTCA ATTGCGTGTT
GAGGAACTTG GCAAGCTTGC AGCGGCTGCA CCTGTTCGAC GCTCCAAAGT CGAGGATATG AGTGCTGAGG TTGTAGATAG
CAATCCTTAT AGTCGGCTTA TGGCACTTCA GAGAATGGGT ATTGTGGAGA ACTATGAAAG AATACGCGAT TTCTCCGTTG
CCATAGTTGG GATAGGTGGT GTAGGAAGTG TTGCAGCTGA GATGCTGACT AGATGCGGCA TAGGTCGACT TTTGTTGTAT
GATTATGACA AAGTGGAGCT TGCAAACATG AATAGGTTGT TCTTTCGTCC AGATCAGGTT GGTTTGACTA AGACAGATGC
AGCTGTACAG ACTCTTTCAG ACATAAACCC TGATGTTGTA CTAGAGAGCT ATACACTGAA TATCACAACC GTCACAGGTT
TTGAAACCTT TATGTCAAGT TTGAAAAAAA AATCATTTTG CCCAAATAAA GAAGGGAGTG GCGTGGATCT GGTTTTAAGT
TGTGTGGATA ATTACGAAGC AAGAATGGCT GTTAACCAGG CCTGTAATGA ATTGAGTCAA ACATGGATGG AGTCAGGTGT
TTCTGAGGAT GCTGTTTCTG GCCATATTCA ATTACTTATT CCTGGTGAAA CTGCCTGTTT TGCTTGTGCC CCTCCTCTGG
TTGTTGCATC TGGGGTAGAT GAACGCACAC TCAAGCGTGA AGGGGTCTGT GCTGCCTCTT TACCCACCAC TATGGGGGTT
GTTGCTGGCC TTCTAGTCCA AAACACACTA AAATTATTGT TAGGCTTTGG ACAAGTCTCT CCATATTTGG GATATAATTC
TCTAAAGGAT TTTTTTCCAA CTATGCAAAT GAAGCCAAAC CCTCAATGTT CAAATGTTGC TTGCTTGAAA AGACAGGAAG
AATACATGCT TGCAAAACCA GCAAGAGATG CTGCAGCCAA AGCAAAAATG GAAGCTGAAG TACTATCAAC TGAGGAAGTG
CCACTTCACG ACGATAATGA ATGGAATATA AGTGTTGTTG ATGATGTTGA GCTGGATGGT CCGGATACCA GAAGTTCAGA
TGTTCTGCCG GAAGGTCTCA CACATGAACT TCCTAGTGCA GACGAGTTTC ATGAGGCAAC TCCTGACGCT CCAGTAGCTG
ACAATGACGA CCTTGAAGAT CTTCGTAGGC AACTTGAAGC CATTAATTCT GCATAGTATA GTGTCAAAAT ATTTTTGCCT
TTTTTAAAGG AAAAAATTTC TGAATTTAAT TGTTCAATTG AGCCAGATTA ACTTTGAAAA TTGAGAAAAA CTAATGTTAA
ATTATTGACT ATTTTGACAA TCCATCCT

>Vigan.01G390500.01
ATGGAGGTCG AACTCAAACA GTTGAACGCC GATCTTCAAT TTCTGAGTCA ATCGCTTCCC GATCCATCTC ACCATGCTTT
GCTCGACAAG ATTCAATTGC GTGTTGAGGA ACTTGGCAAG CTTGCAGCGG CTGCACCTGT TCGACGCTCC AAAGTCGAGG
ATATGAGTGC TGAGGTTGTA GATAGCAATC CTTATAGTCG GCTTATGGCA CTTCAGAGAA TGGGTATTGT GGAGAACTAT
GAAAGAATAC GCGATTTCTC CGTTGCCATA GTTGGGATAG GTGGTGTAGG AAGTGTTGCA GCTGAGATGC TGACTAGATG
CGGCATAGGT CGACTTTTGT TGTATGATTA TGACAAAGTG GAGCTTGCAA ACATGAATAG GTTGTTCTTT CGTCCAGATC
AGGTTGGTTT GACTAAGACA GATGCAGCTG TACAGACTCT TTCAGACATA AACCCTGATG TTGTACTAGA GAGCTATACA
CTGAATATCA CAACCGTCAC AGGTTTTGAA ACCTTTATGT CAAGTTTGAA AAAAAAATCA TTTTGCCCAA ATAAAGAAGG
GAGTGGCGTG GATCTGGTTT TAAGTTGTGT GGATAATTAC GAAGCAAGAA TGGCTGTTAA CCAGGCCTGT AATGAATTGA
GTCAAACATG GATGGAGTCA GGTGTTTCTG AGGATGCTGT TTCTGGCCAT ATTCAATTAC TTATTCCTGG TGAAACTGCC
TGTTTTGCTT GTGCCCCTCC TCTGGTTGTT GCATCTGGGG TAGATGAACG CACACTCAAG CGTGAAGGGG TCTGTGCTGC
CTCTTTACCC ACCACTATGG GGGTTGTTGC TGGCCTTCTA GTCCAAAACA CACTAAAATT ATTGTTAGGC TTTGGACAAG
TCTCTCCATA TTTGGGATAT AATTCTCTAA AGGATTTTTT TCCAACTATG CAAATGAAGC CAAACCCTCA ATGTTCAAAT
GTTGCTTGCT TGAAAAGACA GGAAGAATAC ATGCTTGCAA AACCAGCAAG AGATGCTGCA GCCAAAGCAA AAATGGAAGC
TGAAGTACTA TCAACTGAGG AAGTGCCACT TCACGACGAT AATGAATGGA ATATAAGTGT TGTTGATGAT GTTGAGCTGG
ATGGTCCGGA TACCAGAAGT TCAGATGTTC TGCCGGAAGG TCTCACACAT GAACTTCCTA GTGCAGACGA GTTTCATGAG
GCAACTCCTG ACGCTCCAGT AGCTGACAAT GACGACCTTG AAGATCTTCG TAGGCAACTT GAAGCCATTA ATTCTGCATA
G

>Vigan.01G390500.01
MEVELKQLNA DLQFLSQSLP DPSHHALLDK IQLRVEELGK LAAAAPVRRS KVEDMSAEVV DSNPYSRLMA LQRMGIVENY
ERIRDFSVAI VGIGGVGSVA AEMLTRCGIG RLLLYDYDKV ELANMNRLFF RPDQVGLTKT DAAVQTLSDI NPDVVLESYT
LNITTVTGFE TFMSSLKKKS FCPNKEGSGV DLVLSCVDNY EARMAVNQAC NELSQTWMES GVSEDAVSGH IQLLIPGETA
CFACAPPLVV ASGVDERTLK REGVCAASLP TTMGVVAGLL VQNTLKLLLG FGQVSPYLGY NSLKDFFPTM QMKPNPQCSN
VACLKRQEEY MLAKPARDAA AKAKMEAEVL STEEVPLHDD NEWNISVVDD VELDGPDTRS SDVLPEGLTH ELPSADEFHE
ATPDAPVADN DDLEDLRRQL EAINSA*