GBrowse Details

Vigan.01G293300.01

Basic Information:
Name: Vigan.01G293300.01
Multiple alignment
Variant Information
Position: Chr01:41750017..41753113 (+ strand)
Length: 3097
Functional Information:
Description: Similar to mitochondrial carnitine/acylcarnitine carrier-like protein-like. [XP_004509724.1, Cicer arietinum]
InterPro: Mitochondrial substrate/solute carrier (IPR018108)
Mitochondrial carrier domain (IPR023395)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1.07,0.90,7.45,33.27,4.97,4.53,1.20,7.06
Arabidopsis thaliana homolog: AT5G46800.1
Automatic updates:
Name: NM_001253241 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max mitochondrial carnitine/acylcarnitine carrier-like protein-like (LOC100791908), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001253265 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max mitochondrial carnitine/acylcarnitine carrier-like protein-like (LOC100787304), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:41750017..41751588 (+ strand)
Length: 1572
Type: five_prime_UTR
Position: Chr01:41751589..41751980 (+ strand)
Length: 392
Type: CDS
Position: Chr01:41752364..41752862 (+ strand)
Length: 499
Type: CDS
Position: Chr01:41752863..41753113 (+ strand)
Length: 251
Type: three_prime_UTR

>Vigan.01G293300.01 class=Sequence position=Chr01:41750017..41753113 (+ strand)
TGTCTGGGCA CTTCTAGAGT TCGGTAAGAT TCAAGATTTA GCACAAATTC AAAACTTAGT TTATTGAATC AATGAATGCT
CTGGCTTCAT GTTGTTTGAT TGAAAACTAG TGTATGTGAG TGTCTTTTCT TTCTTCTTTT TCTTCTTCTT TATGTTTATT
TATCTCTAGT TAGATGATTG CTGACACGTA TTGTATTTTT ATTTATGGTT TTGAATTACG GTAATTGTGG TTTTGGAGAA
TTCCGCAACA GCAATTACCA CGCCTTTTAC TTTTGCTTTG TAATTCTGGT GTGGTGACAA TGCAATCCTG TGTAACAAAA
ATTGCGACTG CAATTTAAAG CCAAAAGAGA GTGGAAGGTG TCATCTTTCA TCTTTTGGTG TCTGAACACC AAATTACTCT
TGTGAGCTTT CGGATTCTTT TCTCCTTTAA TACTTCGTGG CATCAAGTGG AAAAAGGGGA TGGACACATA TAGATTGTAT
GTTGAGGGGC TATGAAATAT TGTATATGGC CTTAAATAAA GCTGGTGGAA GAAAATGATT GTTTTTGCTG ATTCTAAGCT
ATCCCATGGT GATGTTGTTA TATACTTATC TGTCTAACTA CCCCTCTTAA TTTATTATCT GTCAAATGTG AATGGATTCT
CTCCTGCCTA TCCTTTTACA TTAATGAAGG TGAGAGCTCT GAAAACTTTC AACTCATTTG GTGAATATGA TGGAGCATGT
AATAAGCTGA TTTTCTGTAG TTTATAAGTT GTTGTTGCAT GCTATACTTT CCATGTATAT CATTGAACAC GAACCAGAGA
ACCTGGTGTT GCATATATGA AAATGTATCT CTCGGGATAT CTTAAATTAT TTTGCCTTTG CATTTCTTGT GTGATAAACT
TGCATTGATG AAATAGCACA CATAATTAAT CAATAAGGTA CATAGTATGG GAAGAACTCA ATTTTTAACT TTCGCGTTAG
CTATAGTCCT ATTCAAAAGG AAAATATGGG GTATGTTTCT ACTGAGTTCC CATCCTACAC TTAATGCTTT GTTTGGTTTA
GGGAAATAAA TAATTTTGAG CAGACAGAAA TAAGTTGGTC TTGCTGGTTC AAGAGATTTA GAGAAGAATT TATTTGAAAT
TACTATGCTA CTGTACTATA GTTTACCTAC TTGCACTCAT CTCTCTTCTC ACATCTTCTC TATTTATTTT CAACCAAATA
TTTTAAACTT TTACTTTATT TTCCACGTAT TTATGCTCGT CCTTTCTATT TCTATACATC ATACTTCTTA GGTCTCTATA
CTTAATGAGT TCATTTTTTG GTTGAGAAAA TAGAGGTTTT GTATGAATTG TTAAGTTATA ATTTCGTGAG TTTGCACTGC
ACTTCCGTTT GTTTAAATAA AAATCCTATT TGATTTGCTA CAAAACAAAA GCTTGATGTT TTTTGTTATG TCCCATATTG
TTTAAATTGA CTGTTTTCTC AAGGATCATA CTTTTCGTTG GGTTCTTTAT ATTAAACCAT TTTATATGTT GATGTTTCAT
GGTCTAAATA ATTTGTTTCC CATTTTCCCT CTTTGGAATT TATGTTTTGC AGATGGGAGA TGTGGCTAAG GACCTTGCAG
CTGGAACTAT TGGAGGGGCA GCACAGTTGA TATGTGGACA CCCCTTTGAC ACCATCAAGG TCAAGCTCCA AAGCCAGCCT
GTACCACTCC CCGGTCAGCT TCCCAAGTAT TCAGGTGCAT TTGATGCTGT CAAGCAGACA ATAGCATCAG AAGGGCCAAG
GGGTTTGTAC AAAGGTATGG GTGTTCCTCT TGCTACAGTA GCAGCTTTCA ATGCTGTCCT GTTTACAGTG AGGGGACAGA
TGGAAACATT AGTGAGGTCC AATCCTGGTG CTCCCCTCAC AGTGAATCAG CAATTTGTCT GTGGAGCTGG AGCTGGAGTT
GCTGTTTCCA TTCTTGCATG CCCAACTGAA TTGATCAAAT GCAGGTCTGA TGGTGTTCTT CTTGTCATGA TCCTCTTTAA
TATCATTTTC TTTCTCTTTT TTCTTTCTAT CAGCTTCTAT AGTTTTGTAG TGGTTTTGGA ATCTTTATTT CCTTTTCTCT
TCATATAAAG TATGGCTTGA ATTTTGACCT GTTTTATTAA TTTGTTTACT ATAAAGTATC TCTTTTTTAG GTGCGTATAA
TATCTTCAAC AAACTTCATT CCCTTCTCAG TTAACGTAAA CCAGATTGTC ATTAAGAAAA ACCAAATGAA TACTAGCTAC
AGATTACTCT TTATTAACTT TTCTTGTTAC TTAGACATGA CCATAGGTAC TCCAAATATG AAGTGATCTT ATACTTGACT
TTTTCAATCC ATGGTGAATA TCATCAGGTT GCAAGCTCAA AGTGCGCTTG CAGGCTCTGA AACAGCTACT GTCGCTGTTA
AGTATGGAGG GCCAATGGAT GTGGCCAGGC ATGTTCTATC AGAAGGGGGA ATAAGAGGTC TTTTCAAGGG CCTGGTTCCC
ACAATGGCTC GAGAGATACC AGGAAATGCT ATAATGTTTG GTGTATACGA AGCATTAAAG AGAAAGTTTG CAGGAGGAAC
TGATACTTCT GGTCTAAGTA GAGGTTCTCT GATTGTTGCT GGAGGCTTGG CTGGAGCTTC TTTCTGGTTC ATTGTTTACC
CAACTGATGT TATTAAGAGT GTGATTCAAG TAGATGATTA CAGAAACCCA AAATTTTCTG GTTCATTTGA TGCATTCAGA
AAGATTCAAG CTTCAGAGGG CTTCAAAGGC TTGTATAAGG GTTTTGGTCC TGCTATGGCC CGAAGTATTC CTGCAAATGC
AGCATGCTTC TTGGCATATG AGATGACAAG ATCAGCTCTG GCATGATTAA TTCTTATAGC AGCTTTAATA TCAATCAAAT
TCTCAAGTTT GTTTTTTCCT TTTTCTTTTC GTTCACTGAA CATATTTTAT TCCATCCATT GACATAAAAC CGCACAAGCG
CGTCTTCTGT TATTTGCTTC AATCAACGAC CGATTCTTTC ACCTATAGTA AAGTAAACAT TTTTCAGTTT CAGGTGCCAC
ATACACATTA TACACTCTGA ATAACATGTT AACTGCATTA CTTTAAAGAC AAGAGAA

>Vigan.01G293300.01
TGTCTGGGCA CTTCTAGAGT TCGGTAAGAT TCAAGATTTA GCACAAATTC AAAACTTAGT TTATTGAATC AATGAATGCT
CTGGCTTCAT GTTGTTTGAT TGAAAACTAG TGTATGTGAG TGTCTTTTCT TTCTTCTTTT TCTTCTTCTT TATGTTTATT
TATCTCTAGT TAGATGATTG CTGACACGTA TTGTATTTTT ATTTATGGTT TTGAATTACG GTAATTGTGG TTTTGGAGAA
TTCCGCAACA GCAATTACCA CGCCTTTTAC TTTTGCTTTG TAATTCTGGT GTGGTGACAA TGCAATCCTG TGTAACAAAA
ATTGCGACTG CAATTTAAAG CCAAAAGAGA GTGGAAGGTG TCATCTTTCA TCTTTTGGTG TCTGAACACC AAATTACTCT
TGTGAGCTTT CGGATTCTTT TCTCCTTTAA TACTTCGTGG CATCAAGTGG AAAAAGGGGA TGGACACATA TAGATTGTAT
GTTGAGGGGC TATGAAATAT TGTATATGGC CTTAAATAAA GCTGGTGGAA GAAAATGATT GTTTTTGCTG ATTCTAAGCT
ATCCCATGGT GATGTTGTTA TATACTTATC TGTCTAACTA CCCCTCTTAA TTTATTATCT GTCAAATGTG AATGGATTCT
CTCCTGCCTA TCCTTTTACA TTAATGAAGG TGAGAGCTCT GAAAACTTTC AACTCATTTG GTGAATATGA TGGAGCATGT
AATAAGCTGA TTTTCTGTAG TTTATAAGTT GTTGTTGCAT GCTATACTTT CCATGTATAT CATTGAACAC GAACCAGAGA
ACCTGGTGTT GCATATATGA AAATGTATCT CTCGGGATAT CTTAAATTAT TTTGCCTTTG CATTTCTTGT GTGATAAACT
TGCATTGATG AAATAGCACA CATAATTAAT CAATAAGGTA CATAGTATGG GAAGAACTCA ATTTTTAACT TTCGCGTTAG
CTATAGTCCT ATTCAAAAGG AAAATATGGG GTATGTTTCT ACTGAGTTCC CATCCTACAC TTAATGCTTT GTTTGGTTTA
GGGAAATAAA TAATTTTGAG CAGACAGAAA TAAGTTGGTC TTGCTGGTTC AAGAGATTTA GAGAAGAATT TATTTGAAAT
TACTATGCTA CTGTACTATA GTTTACCTAC TTGCACTCAT CTCTCTTCTC ACATCTTCTC TATTTATTTT CAACCAAATA
TTTTAAACTT TTACTTTATT TTCCACGTAT TTATGCTCGT CCTTTCTATT TCTATACATC ATACTTCTTA GGTCTCTATA
CTTAATGAGT TCATTTTTTG GTTGAGAAAA TAGAGGTTTT GTATGAATTG TTAAGTTATA ATTTCGTGAG TTTGCACTGC
ACTTCCGTTT GTTTAAATAA AAATCCTATT TGATTTGCTA CAAAACAAAA GCTTGATGTT TTTTGTTATG TCCCATATTG
TTTAAATTGA CTGTTTTCTC AAGGATCATA CTTTTCGTTG GGTTCTTTAT ATTAAACCAT TTTATATGTT GATGTTTCAT
GGTCTAAATA ATTTGTTTCC CATTTTCCCT CTTTGGAATT TATGTTTTGC AGATGGGAGA TGTGGCTAAG GACCTTGCAG
CTGGAACTAT TGGAGGGGCA GCACAGTTGA TATGTGGACA CCCCTTTGAC ACCATCAAGG TCAAGCTCCA AAGCCAGCCT
GTACCACTCC CCGGTCAGCT TCCCAAGTAT TCAGGTGCAT TTGATGCTGT CAAGCAGACA ATAGCATCAG AAGGGCCAAG
GGGTTTGTAC AAAGGTATGG GTGTTCCTCT TGCTACAGTA GCAGCTTTCA ATGCTGTCCT GTTTACAGTG AGGGGACAGA
TGGAAACATT AGTGAGGTCC AATCCTGGTG CTCCCCTCAC AGTGAATCAG CAATTTGTCT GTGGAGCTGG AGCTGGAGTT
GCTGTTTCCA TTCTTGCATG CCCAACTGAA TTGATCAAAT GCAGGTTGCA AGCTCAAAGT GCGCTTGCAG GCTCTGAAAC
AGCTACTGTC GCTGTTAAGT ATGGAGGGCC AATGGATGTG GCCAGGCATG TTCTATCAGA AGGGGGAATA AGAGGTCTTT
TCAAGGGCCT GGTTCCCACA ATGGCTCGAG AGATACCAGG AAATGCTATA ATGTTTGGTG TATACGAAGC ATTAAAGAGA
AAGTTTGCAG GAGGAACTGA TACTTCTGGT CTAAGTAGAG GTTCTCTGAT TGTTGCTGGA GGCTTGGCTG GAGCTTCTTT
CTGGTTCATT GTTTACCCAA CTGATGTTAT TAAGAGTGTG ATTCAAGTAG ATGATTACAG AAACCCAAAA TTTTCTGGTT
CATTTGATGC ATTCAGAAAG ATTCAAGCTT CAGAGGGCTT CAAAGGCTTG TATAAGGGTT TTGGTCCTGC TATGGCCCGA
AGTATTCCTG CAAATGCAGC ATGCTTCTTG GCATATGAGA TGACAAGATC AGCTCTGGCA TGATTAATTC TTATAGCAGC
TTTAATATCA ATCAAATTCT CAAGTTTGTT TTTTCCTTTT TCTTTTCGTT CACTGAACAT ATTTTATTCC ATCCATTGAC
ATAAAACCGC ACAAGCGCGT CTTCTGTTAT TTGCTTCAAT CAACGACCGA TTCTTTCACC TATAGTAAAG TAAACATTTT
TCAGTTTCAG GTGCCACATA CACATTATAC ACTCTGAATA ACATGTTAAC TGCATTACTT TAAAGACAAG AGAA

>Vigan.01G293300.01
ATGGGAGATG TGGCTAAGGA CCTTGCAGCT GGAACTATTG GAGGGGCAGC ACAGTTGATA TGTGGACACC CCTTTGACAC
CATCAAGGTC AAGCTCCAAA GCCAGCCTGT ACCACTCCCC GGTCAGCTTC CCAAGTATTC AGGTGCATTT GATGCTGTCA
AGCAGACAAT AGCATCAGAA GGGCCAAGGG GTTTGTACAA AGGTATGGGT GTTCCTCTTG CTACAGTAGC AGCTTTCAAT
GCTGTCCTGT TTACAGTGAG GGGACAGATG GAAACATTAG TGAGGTCCAA TCCTGGTGCT CCCCTCACAG TGAATCAGCA
ATTTGTCTGT GGAGCTGGAG CTGGAGTTGC TGTTTCCATT CTTGCATGCC CAACTGAATT GATCAAATGC AGGTTGCAAG
CTCAAAGTGC GCTTGCAGGC TCTGAAACAG CTACTGTCGC TGTTAAGTAT GGAGGGCCAA TGGATGTGGC CAGGCATGTT
CTATCAGAAG GGGGAATAAG AGGTCTTTTC AAGGGCCTGG TTCCCACAAT GGCTCGAGAG ATACCAGGAA ATGCTATAAT
GTTTGGTGTA TACGAAGCAT TAAAGAGAAA GTTTGCAGGA GGAACTGATA CTTCTGGTCT AAGTAGAGGT TCTCTGATTG
TTGCTGGAGG CTTGGCTGGA GCTTCTTTCT GGTTCATTGT TTACCCAACT GATGTTATTA AGAGTGTGAT TCAAGTAGAT
GATTACAGAA ACCCAAAATT TTCTGGTTCA TTTGATGCAT TCAGAAAGAT TCAAGCTTCA GAGGGCTTCA AAGGCTTGTA
TAAGGGTTTT GGTCCTGCTA TGGCCCGAAG TATTCCTGCA AATGCAGCAT GCTTCTTGGC ATATGAGATG ACAAGATCAG
CTCTGGCATG A

>Vigan.01G293300.01
MGDVAKDLAA GTIGGAAQLI CGHPFDTIKV KLQSQPVPLP GQLPKYSGAF DAVKQTIASE GPRGLYKGMG VPLATVAAFN
AVLFTVRGQM ETLVRSNPGA PLTVNQQFVC GAGAGVAVSI LACPTELIKC RLQAQSALAG SETATVAVKY GGPMDVARHV
LSEGGIRGLF KGLVPTMARE IPGNAIMFGV YEALKRKFAG GTDTSGLSRG SLIVAGGLAG ASFWFIVYPT DVIKSVIQVD
DYRNPKFSGS FDAFRKIQAS EGFKGLYKGF GPAMARSIPA NAACFLAYEM TRSALA*