GBrowse Details

Vigan.01G277600.01

Basic Information:
Name: Vigan.01G277600.01
Multiple alignment
Variant Information
Position: Chr01:39531226..39533368 (- strand)
Length: 2143
Functional Information:
Description: Similar to Uncharacterized protein. [K7L2Z5, Glycine max]
InterPro: Uncharacterised protein family Cys-rich (IPR006461)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.06,0.00,0.00,0.00,0.75,0.00,64.14,0.00
Automatic updates:
Name: NM_001251353 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527585 (LOC100527585), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:39531226..39531550 (- strand)
Length: 325
Type: three_prime_UTR
Position: Chr01:39531551..39531627 (- strand)
Length: 77
Type: CDS
Position: Chr01:39532586..39532798 (- strand)
Length: 213
Type: CDS
Position: Chr01:39532906..39532977 (- strand)
Length: 72
Type: CDS
Position: Chr01:39533074..39533287 (- strand)
Length: 214
Type: CDS
Position: Chr01:39533288..39533368 (- strand)
Length: 81
Type: five_prime_UTR

>Vigan.01G277600.01 class=Sequence position=Chr01:39531226..39533368 (- strand)
TATACACTAA CATAAGCCAT AAAAGTTTGC CTTCCTTAGA GTGTCATTGC AGTAACGTAA ATCTAGCTAA GTCTGAGAAA
AATGTATCCT GCAGTGGATG AACATGATGA GGCATATGAA GTTCATCACA GCCATCCAAG CTATATTGTT CCAGTGGTGG
TTCCTCCAAC TTATGCCCGT TCCCATATAC CATCTTATGC ACCTCCATAT ATCAGCAACA GTGTTAGGGG TCCTGTGATC
AGGACACAGC GATGGTCAAC TGGTCTTTGT CGTTGTCTTG ATGATCCTGG AAACTGTAAG ACTAAGAGCT CATGAATCAA
TCATGTGGGT TCATTATTTT TGTTTTCTTT ACAAGCAATT GACATAGTAT GGTTGTTTGT TGTTGTCTAA GGTTTGGTTA
CTTGCTTCTG CCCTTGTGTT ACATTCGGAT TGATAGCAGA AATAATAGAT AAAGGCAATA GAAGTAAGTT TTTCTGCATT
AATCATGAGT ACAATATATA TTCAAGGTGA TGACTCATAA TGGTTATATG TACTGCTATT TCTCTTGTCT TTTTCTTGTT
ATATATGCAG CTTGCACTTG TAATGGGGCT ATTTATGCTA CCCTGCTATC TCTGAGCGGG TTTGCATGCT TGTACTCATG
CTATTATAGG TCCAAAATGA GGGCACAATA TGACTTGCCA GAGGCTCCAT GTATGGATTG CTTAGTTCAT TTCTGCTGTG
AAACCTGTGC TCTATGTCAG GAGTATAGAG AACTTAAAAA CCGTGGATTT GATTTGAGCA TAGGTAATGC TATCTTTAAC
TTTGGCTAAC AAATATACTT TGCATCTCAT CATCTTTAAG ATCTCTTTGT TTATCTCATG TCCTCTCAAA ATTTGATTTC
GATGTATTGA GGGTAAGAAT ATTAGTGAAT TGTCAGACAC CATATGGGTT TTCTGCTAAA TAATGCGTTT GAATAGGCAT
AATCAGTATG ATATTGTAGG ATTTTCATTT GGACAAACTG CATCCACAAT TTTAAGATAG TATACTTTCA TTGAATCTGA
TTGGAAGGAT GCAAAATTGC ATGTTTCTTT TGCTGACAGG TTGAACTTTC TTTTTTACTG ATTGGAACTA TTCTATTGGT
CAAACTTGCT TTGATATAAT CCTTTGTCAT CTTTCTCCCT CTAGATCTTA CTTTTGAGCT AGAGTAGTTT ATTGCTATAT
TTTTCTGGAA CTTGTAAGTA GAATATTTTG ACAACATACT ACCATGAAAT TTACCAATTT ACATATGTTT TTAGTTCTAA
ACATAAATAT AAAATTTCAA ATTTTGATCT TTAAACTAAA AAAAATAATG AATATAGTAT TTTTAATCCA ATTATATCAA
CTTTGTTTTT TACATGCTAA ATGGTATTTT AGATTACCAT TTAAACTGTT GCAATCATTA GATACATTAT AACTCAAAGT
CAATATAAAA TATTGTTTAA CATACAAAAA TGTTAACATC GTTTTATCTG TTCATTTTTT AGGTTTTGAG AACAAAATAT
ATCAAAGTTT AAAATATGAA TGAATTCTAA TTTTACATCT AAGTTCAAGG TTGTGGTGTG ATTGTTTACT CTAAAAGGTT
TGATAATCAA TGTATAATTT TCCTTATTAT GCTGAAAACT AAAACATAAA ACTTCACCTT TGTGTTCTTA GCAATCCTCT
CCCATTTCAA AGGATAAGAG ATAAAACTAA CTTGTTCTGA GGGCAATGAA CTGAAATATA GGTTGGGAAG CCAACAGGGA
AAGGCAAGGG CAAGGAGCTA TAATATCACC TGTAATATCA CAGTCTATGA CAAGATGAAA AGGGAAACAT CTTTAGGAGC
TTTTTAAGGC AACCCTCGTA GCAGTTGGTG CTGTTAATTT CAACTACTTG ATGTTTATCT TTTGTTTACT GGTTGATTTC
AGTGTTTTGT GTCTTTGTGC ACATAGTAGT GTATCTTGAT GGATATACCA CCTATCGAGA CAAAGGCTGT GATAAGAAGG
TTATCAATTG TGTATTAAAT GACTTATTAG TAATGATTGC TAGCTTTTAT AGTCAGTTTA TTACACTTGG AACAACATGT
GAGTATCTAA TCTAAGGCTT TAACATTAAT AGCATATTTT TTTATGTAAC TTTCATGAAA ACT

>Vigan.01G277600.01
TATACACTAA CATAAGCCAT AAAAGTTTGC CTTCCTTAGA GTGTCATTGC AGTAACGTAA ATCTAGCTAA GTCTGAGAAA
AATGTATCCT GCAGTGGATG AACATGATGA GGCATATGAA GTTCATCACA GCCATCCAAG CTATATTGTT CCAGTGGTGG
TTCCTCCAAC TTATGCCCGT TCCCATATAC CATCTTATGC ACCTCCATAT ATCAGCAACA GTGTTAGGGG TCCTGTGATC
AGGACACAGC GATGGTCAAC TGGTCTTTGT CGTTGTCTTG ATGATCCTGG AAACTGTTTG GTTACTTGCT TCTGCCCTTG
TGTTACATTC GGATTGATAG CAGAAATAAT AGATAAAGGC AATAGAACTT GCACTTGTAA TGGGGCTATT TATGCTACCC
TGCTATCTCT GAGCGGGTTT GCATGCTTGT ACTCATGCTA TTATAGGTCC AAAATGAGGG CACAATATGA CTTGCCAGAG
GCTCCATGTA TGGATTGCTT AGTTCATTTC TGCTGTGAAA CCTGTGCTCT ATGTCAGGAG TATAGAGAAC TTAAAAACCG
TGGATTTGAT TTGAGCATAG GTTGGGAAGC CAACAGGGAA AGGCAAGGGC AAGGAGCTAT AATATCACCT GTAATATCAC
AGTCTATGAC AAGATGAAAA GGGAAACATC TTTAGGAGCT TTTTAAGGCA ACCCTCGTAG CAGTTGGTGC TGTTAATTTC
AACTACTTGA TGTTTATCTT TTGTTTACTG GTTGATTTCA GTGTTTTGTG TCTTTGTGCA CATAGTAGTG TATCTTGATG
GATATACCAC CTATCGAGAC AAAGGCTGTG ATAAGAAGGT TATCAATTGT GTATTAAATG ACTTATTAGT AATGATTGCT
AGCTTTTATA GTCAGTTTAT TACACTTGGA ACAACATGTG AGTATCTAAT CTAAGGCTTT AACATTAATA GCATATTTTT
TTATGTAACT TTCATGAAAA CT

>Vigan.01G277600.01
ATGTATCCTG CAGTGGATGA ACATGATGAG GCATATGAAG TTCATCACAG CCATCCAAGC TATATTGTTC CAGTGGTGGT
TCCTCCAACT TATGCCCGTT CCCATATACC ATCTTATGCA CCTCCATATA TCAGCAACAG TGTTAGGGGT CCTGTGATCA
GGACACAGCG ATGGTCAACT GGTCTTTGTC GTTGTCTTGA TGATCCTGGA AACTGTTTGG TTACTTGCTT CTGCCCTTGT
GTTACATTCG GATTGATAGC AGAAATAATA GATAAAGGCA ATAGAACTTG CACTTGTAAT GGGGCTATTT ATGCTACCCT
GCTATCTCTG AGCGGGTTTG CATGCTTGTA CTCATGCTAT TATAGGTCCA AAATGAGGGC ACAATATGAC TTGCCAGAGG
CTCCATGTAT GGATTGCTTA GTTCATTTCT GCTGTGAAAC CTGTGCTCTA TGTCAGGAGT ATAGAGAACT TAAAAACCGT
GGATTTGATT TGAGCATAGG TTGGGAAGCC AACAGGGAAA GGCAAGGGCA AGGAGCTATA ATATCACCTG TAATATCACA
GTCTATGACA AGATGA

>Vigan.01G277600.01
MYPAVDEHDE AYEVHHSHPS YIVPVVVPPT YARSHIPSYA PPYISNSVRG PVIRTQRWST GLCRCLDDPG NCLVTCFCPC
VTFGLIAEII DKGNRTCTCN GAIYATLLSL SGFACLYSCY YRSKMRAQYD LPEAPCMDCL VHFCCETCAL CQEYRELKNR
GFDLSIGWEA NRERQGQGAI ISPVISQSMT R*